RNA–Protein interactions for RNA: ENST00000584842.1

CTC1-213, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-213ENST00000584842 GPC2Q8N158 579 aa10.06□□□□□ -0.8
CTC1-213ENST00000584842 RBM46Q8TBY0 533 aaKnown RBP10.06□□□□□ -0.8
CTC1-213ENST00000584842 BSDC1Q9NW68 430 aaPredicted RBP10.06□□□□□ -0.8
CTC1-213ENST00000584842 ZNRF3Q9ULT6 936 aa10.06□□□□□ -0.8
CTC1-213ENST00000584842 HDAC5Q9UQL6 1122 aa10.06□□□□□ -0.8
CTC1-213ENST00000584842 COL4A5P29400 1685 aa10.06□□□□□ -0.8
CTC1-213ENST00000584842 PSME4Q14997 1843 aa10.05□□□□□ -0.8
CTC1-213ENST00000584842 CSF1RP07333 972 aa10.05□□□□□ -0.8
CTC1-213ENST00000584842 ATP2B4P23634 1241 aa10.05□□□□□ -0.8
CTC1-213ENST00000584842 TNIP1Q15025 636 aa10.05□□□□□ -0.8
CTC1-213ENST00000584842 CCDC57Q2TAC2 916 aa10.05□□□□□ -0.8
CTC1-213ENST00000584842 SLC51AQ86UW1 340 aa10.05□□□□□ -0.8
CTC1-213ENST00000584842 SMC1BQ8NDV3 1235 aa10.05□□□□□ -0.8
CTC1-213ENST00000584842 L3MBTL3Q96JM7 780 aaPredicted RBP10.05□□□□□ -0.8
CTC1-213ENST00000584842 ZC3H12CQ9C0D7 883 aaKnown RBP10.05□□□□□ -0.8
CTC1-213ENST00000584842 ANKRD2Q9GZV1 360 aa10.05□□□□□ -0.8
CTC1-213ENST00000584842 PODXL2Q9NZ53 605 aa10.05□□□□□ -0.8
CTC1-213ENST00000584842 NOB1Q9ULX3 412 aaKnown RBP10.05□□□□□ -0.8
CTC1-213ENST00000584842 GJA3Q9Y6H8 435 aa10.05□□□□□ -0.8
CTC1-213ENST00000584842 KCNJ4P48050 445 aa10.04□□□□□ -0.8
CTC1-213ENST00000584842 FSTL1Q12841 308 aa10.04□□□□□ -0.8
CTC1-213ENST00000584842 LMBR1LQ6UX01 489 aa10.04□□□□□ -0.8
CTC1-213ENST00000584842 TBC1D16Q8TBP0 767 aa10.04□□□□□ -0.8
CTC1-213ENST00000584842 ARHGAP45Q92619 1136 aa10.04□□□□□ -0.8
CTC1-213ENST00000584842 HACL1Q9UJ83 578 aa10.04□□□□□ -0.8
CTC1-213ENST00000584842 UTYO14607 1347 aa10.04□□□□□ -0.8
CTC1-213ENST00000584842 RIMBP2O15034 1052 aa10.03□□□□□ -0.8
CTC1-213ENST00000584842 UBTFL1P0CB47 393 aaPredicted RBP10.03□□□□□ -0.8
CTC1-213ENST00000584842 FOXO4P98177 505 aa10.03□□□□□ -0.8
CTC1-213ENST00000584842 CIAPIN1Q6FI81 312 aa10.03□□□□□ -0.8
CTC1-213ENST00000584842 FRAT1Q92837 279 aaPredicted RBP10.03□□□□□ -0.8
CTC1-213ENST00000584842 SUCLG2Q96I99 432 aa10.03□□□□□ -0.8
CTC1-213ENST00000584842 POLLQ9UGP5 575 aa10.03□□□□□ -0.8
CTC1-213ENST00000584842 MED23Q9ULK4 1368 aa10.02□□□□□ -0.8
CTC1-213ENST00000584842 ECE2O60344 883 aa10.02□□□□□ -0.81
CTC1-213ENST00000584842 NBPF7P0C2Y1 421 aaPredicted RBP10.02□□□□□ -0.81
CTC1-213ENST00000584842 EPHX2P34913 555 aa10.02□□□□□ -0.81
CTC1-213ENST00000584842 PNMA8AQ86V59 439 aaPredicted RBP10.02□□□□□ -0.81
CTC1-213ENST00000584842 DBNDD1Q9H9R9 158 aa10.02□□□□□ -0.81
CTC1-213ENST00000584842 CNNM1Q9NRU3 951 aa10.02□□□□□ -0.81
CTC1-213ENST00000584842 MINPP1Q9UNW1 487 aa10.02□□□□□ -0.81
CTC1-213ENST00000584842 LEMD3Q9Y2U8 911 aa10.02□□□□□ -0.81
CTC1-213ENST00000584842 SCN9AQ15858 1988 aa10.01□□□□□ -0.81
CTC1-213ENST00000584842 RAD17O75943 681 aa10.01□□□□□ -0.81
CTC1-213ENST00000584842 HSPA6P17066 643 aa10.01□□□□□ -0.81
CTC1-213ENST00000584842 EAPPQ56P03 285 aaPredicted RBP10.01□□□□□ -0.81
CTC1-213ENST00000584842 EPHA10Q5JZY3 1008 aa10.01□□□□□ -0.81
CTC1-213ENST00000584842 ZKSCAN2Q63HK3 967 aa10.01□□□□□ -0.81
CTC1-213ENST00000584842 ATF7IPQ6VMQ6 1270 aa10.01□□□□□ -0.81
CTC1-213ENST00000584842 LDHAL6AQ6ZMR3 332 aa10.01□□□□□ -0.81
CTC1-213ENST00000584842 LDHDQ86WU2 507 aa10.01□□□□□ -0.81
CTC1-213ENST00000584842 FTSJ3Q8IY81 847 aaKnown RBP10.01□□□□□ -0.81
CTC1-213ENST00000584842 TAF1DQ9H5J8 278 aaPredicted RBP10.01□□□□□ -0.81
CTC1-213ENST00000584842 BICC1Q9H694 974 aaKnown RBP10.01□□□□□ -0.81
CTC1-213ENST00000584842 ZNF804BA4D1E1 1349 aa10.01□□□□□ -0.81
CTC1-213ENST00000584842 POTECB2RU33 542 aa10□□□□□ -0.81
CTC1-213ENST00000584842 BCAR3O75815 825 aa10□□□□□ -0.81
CTC1-213ENST00000584842 GNAI3P08754 354 aa10□□□□□ -0.81
CTC1-213ENST00000584842 CHRNDQ07001 517 aa10□□□□□ -0.81
CTC1-213ENST00000584842 CXCL9Q07325 125 aa10□□□□□ -0.81
CTC1-213ENST00000584842 DOK7Q18PE1 504 aa10□□□□□ -0.81
CTC1-213ENST00000584842 RABL6Q3YEC7 729 aaPredicted RBP10□□□□□ -0.81
CTC1-213ENST00000584842 CHADLQ6NUI6 762 aa10□□□□□ -0.81
CTC1-213ENST00000584842 GPR101Q96P66 508 aaPredicted RBP10□□□□□ -0.81
CTC1-213ENST00000584842 USP44Q9H0E7 712 aa10□□□□□ -0.81
CTC1-213ENST00000584842 CLEC11AQ9Y240 323 aa10□□□□□ -0.81
CTC1-213ENST00000584842 ADAMTSL1Q8N6G6 1762 aa10□□□□□ -0.81
CTC1-213ENST00000584842 MYH13Q9UKX3 1938 aa9.99□□□□□ -0.81
CTC1-213ENST00000584842 TRIM27P14373 513 aa9.99□□□□□ -0.81
CTC1-213ENST00000584842 RPS12P25398 132 aaKnown RBP9.99□□□□□ -0.81
CTC1-213ENST00000584842 GMPSP49915 693 aaPredicted RBP9.99□□□□□ -0.81
CTC1-213ENST00000584842 APLP1P51693 650 aa9.99□□□□□ -0.81
CTC1-213ENST00000584842 INTS3Q68E01 1043 aaKnown RBP9.99□□□□□ -0.81
CTC1-213ENST00000584842 COA1Q9GZY4 146 aa9.99□□□□□ -0.81
CTC1-213ENST00000584842 ADARB2Q9NS39 739 aaKnown RBP9.99□□□□□ -0.81
CTC1-213ENST00000584842 GPRC5DQ9NZD1 345 aa9.99□□□□□ -0.81
CTC1-213ENST00000584842 MROH5Q6ZUA9 1318 aa9.99□□□□□ -0.81
CTC1-213ENST00000584842 YDJCA8MPS7 323 aa9.98□□□□□ -0.81
CTC1-213ENST00000584842 H7C1D1 291 aa9.98□□□□□ -0.81
CTC1-213ENST00000584842 PSMD14O00487 310 aa9.98□□□□□ -0.81
CTC1-213ENST00000584842 SCNN1DP51172 638 aa9.98□□□□□ -0.81
CTC1-213ENST00000584842 USP50Q70EL3 339 aaPredicted RBP9.98□□□□□ -0.81
CTC1-213ENST00000584842 ZNF804AQ7Z570 1209 aa9.98□□□□□ -0.81
CTC1-213ENST00000584842 PODNQ7Z5L7 613 aa9.98□□□□□ -0.81
CTC1-213ENST00000584842 ANKRD44Q8N8A2 993 aa9.98□□□□□ -0.81
CTC1-213ENST00000584842 FBXW7Q969H0 707 aa9.98□□□□□ -0.81
CTC1-213ENST00000584842 KAZALD1Q96I82 304 aa9.98□□□□□ -0.81
CTC1-213ENST00000584842 ZNF594Q96JF6 807 aaPredicted RBP9.98□□□□□ -0.81
CTC1-213ENST00000584842 TRPM7Q96QT4 1865 aa9.98□□□□□ -0.81
CTC1-213ENST00000584842 USP17L3A6NCW0 530 aa9.97□□□□□ -0.81
CTC1-213ENST00000584842 USP17L4A6NCW7 530 aa9.97□□□□□ -0.81
CTC1-213ENST00000584842 PLIN1O60240 522 aa9.97□□□□□ -0.81
CTC1-213ENST00000584842 MS4A1P11836 297 aa9.97□□□□□ -0.81
CTC1-213ENST00000584842 METTL24Q5JXM2 366 aa9.97□□□□□ -0.81
CTC1-213ENST00000584842 USP17L1Q7RTZ2 530 aa9.97□□□□□ -0.81
CTC1-213ENST00000584842 DPF2Q92785 391 aa9.97□□□□□ -0.81
CTC1-213ENST00000584842 CLUAP1Q96AJ1 413 aa9.97□□□□□ -0.81
CTC1-213ENST00000584842 LRRFIP2Q9Y608 721 aaKnown RBP9.97□□□□□ -0.81
CTC1-213ENST00000584842 MYO3BQ8WXR4 1341 aa9.97□□□□□ -0.81
CTC1-213ENST00000584842 ZNF609O15014 1411 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms