RNA–Protein interactions for RNA: ENST00000584506.1

CDH8-212, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-212ENST00000584506 BICC1Q9H694 974 aaKnown RBP8.27□□□□□ -1.09
CDH8-212ENST00000584506 TSHZ2Q9NRE2 1034 aa8.27□□□□□ -1.09
CDH8-212ENST00000584506 UBR3Q6ZT12 1888 aa8.27□□□□□ -1.09
CDH8-212ENST00000584506 RGPD3A6NKT7 1758 aaPredicted RBP8.27□□□□□ -1.09
CDH8-212ENST00000584506 RGPD4Q7Z3J3 1758 aa8.27□□□□□ -1.09
CDH8-212ENST00000584506 CDHR2Q9BYE9 1310 aa8.27□□□□□ -1.09
CDH8-212ENST00000584506 GNPATO15228 680 aa8.26□□□□□ -1.09
CDH8-212ENST00000584506 ZPR1O75312 459 aa8.26□□□□□ -1.09
CDH8-212ENST00000584506 CAMTA2O94983 1202 aa8.26□□□□□ -1.09
CDH8-212ENST00000584506 APBA3O96018 575 aa8.26□□□□□ -1.09
CDH8-212ENST00000584506 GPTP24298 496 aa8.26□□□□□ -1.09
CDH8-212ENST00000584506 CASP7P55210 303 aa8.26□□□□□ -1.09
CDH8-212ENST00000584506 KCNQ4P56696 695 aa8.26□□□□□ -1.09
CDH8-212ENST00000584506 G3BP1Q13283 466 aaKnown RBP eCLIP8.26□□□□□ -1.09
CDH8-212ENST00000584506 OS9Q13438 667 aaPredicted RBP8.26□□□□□ -1.09
CDH8-212ENST00000584506 CAMK2BQ13554 666 aa8.26□□□□□ -1.09
CDH8-212ENST00000584506 RABL6Q3YEC7 729 aaPredicted RBP8.26□□□□□ -1.09
CDH8-212ENST00000584506 ZNF34Q8IZ26 560 aa8.26□□□□□ -1.09
CDH8-212ENST00000584506 KAZALD1Q96I82 304 aa8.26□□□□□ -1.09
CDH8-212ENST00000584506 LRRCC1Q9C099 1032 aa8.26□□□□□ -1.09
CDH8-212ENST00000584506 NARFQ9UHQ1 456 aa8.26□□□□□ -1.09
CDH8-212ENST00000584506 NOP58Q9Y2X3 529 aaKnown RBP8.26□□□□□ -1.09
CDH8-212ENST00000584506 SCN7AQ01118 1682 aa8.26□□□□□ -1.09
CDH8-212ENST00000584506 TNS1Q9HBL0 1735 aaKnown RBP8.26□□□□□ -1.09
CDH8-212ENST00000584506 RFC4P35249 363 aa8.25□□□□□ -1.09
CDH8-212ENST00000584506 TRAPPC3LQ5T215 181 aa8.25□□□□□ -1.09
CDH8-212ENST00000584506 KIF1BPQ96EK5 621 aa8.25□□□□□ -1.09
CDH8-212ENST00000584506 PLA2G12BQ9BX93 195 aa8.25□□□□□ -1.09
CDH8-212ENST00000584506 TRMT112Q9UI30 125 aaKnown RBP8.25□□□□□ -1.09
CDH8-212ENST00000584506 NIP7Q9Y221 180 aaKnown RBP eCLIP8.25□□□□□ -1.09
CDH8-212ENST00000584506 EXOC6BQ9Y2D4 811 aa8.25□□□□□ -1.09
CDH8-212ENST00000584506 C4AP0C0L4 1744 aa8.25□□□□□ -1.09
CDH8-212ENST00000584506 LAMB2P55268 1798 aa8.25□□□□□ -1.09
CDH8-212ENST00000584506 APBB1O00213 710 aa8.24□□□□□ -1.09
CDH8-212ENST00000584506 PDE8AO60658 829 aa8.24□□□□□ -1.09
CDH8-212ENST00000584506 FOXO4P98177 505 aa8.24□□□□□ -1.09
CDH8-212ENST00000584506 TXNRD1Q16881 649 aa8.24□□□□□ -1.09
CDH8-212ENST00000584506 RTL5Q5HYW3 569 aaPredicted RBP8.24□□□□□ -1.09
CDH8-212ENST00000584506 LMBR1LQ6UX01 489 aa8.24□□□□□ -1.09
CDH8-212ENST00000584506 SKAP1Q86WV1 359 aa8.24□□□□□ -1.09
CDH8-212ENST00000584506 RHPN1Q8TCX5 695 aa8.24□□□□□ -1.09
CDH8-212ENST00000584506 JARID2Q92833 1246 aaPredicted RBP8.24□□□□□ -1.09
CDH8-212ENST00000584506 FAM89AQ96GI7 184 aa8.24□□□□□ -1.09
CDH8-212ENST00000584506 UTP14AQ9BVJ6 771 aaKnown RBP8.24□□□□□ -1.09
CDH8-212ENST00000584506 COPRSQ9NQ92 184 aa8.24□□□□□ -1.09
CDH8-212ENST00000584506 LRRC4BQ9NT99 713 aa8.24□□□□□ -1.09
CDH8-212ENST00000584506 SH3TC1Q8TE82 1336 aa8.24□□□□□ -1.09
CDH8-212ENST00000584506 AK9Q5TCS8 1911 aa8.23□□□□□ -1.09
CDH8-212ENST00000584506 IRS4O14654 1257 aaPredicted RBP8.23□□□□□ -1.09
CDH8-212ENST00000584506 SSFA2P28290 1259 aa8.23□□□□□ -1.09
CDH8-212ENST00000584506 SF3B2Q13435 895 aaKnown RBP8.23□□□□□ -1.09
CDH8-212ENST00000584506 CCDC57Q2TAC2 916 aa8.23□□□□□ -1.09
CDH8-212ENST00000584506 FAM161AQ3B820 660 aa8.23□□□□□ -1.09
CDH8-212ENST00000584506 EPHA10Q5JZY3 1008 aa8.23□□□□□ -1.09
CDH8-212ENST00000584506 CLASRPQ8N2M8 674 aaKnown RBP8.23□□□□□ -1.09
CDH8-212ENST00000584506 ARHGEF1Q92888 912 aaKnown RBP8.23□□□□□ -1.09
CDH8-212ENST00000584506 SETDB2Q96T68 719 aa8.23□□□□□ -1.09
CDH8-212ENST00000584506 NYXQ9GZU5 481 aa8.23□□□□□ -1.09
CDH8-212ENST00000584506 CHMP3Q9Y3E7 222 aa8.23□□□□□ -1.09
CDH8-212ENST00000584506 CASZ1Q86V15 1759 aa8.22□□□□□ -1.09
CDH8-212ENST00000584506 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.22□□□□□ -1.09
CDH8-212ENST00000584506 ARHGAP33O14559 1287 aa8.22□□□□□ -1.09
CDH8-212ENST00000584506 SMARCA5O60264 1052 aaPredicted RBP8.22□□□□□ -1.09
CDH8-212ENST00000584506 EIF5BO60841 1220 aaKnown RBP8.22□□□□□ -1.09
CDH8-212ENST00000584506 CSF1RP07333 972 aa8.22□□□□□ -1.09
CDH8-212ENST00000584506 GTF2E1P29083 439 aaPredicted RBP8.22□□□□□ -1.09
CDH8-212ENST00000584506 IFIT5Q13325 482 aaKnown RBP8.22□□□□□ -1.09
CDH8-212ENST00000584506 PPP4R3BQ5MIZ7 849 aa8.22□□□□□ -1.09
CDH8-212ENST00000584506 SUSD4Q5VX71 490 aa8.22□□□□□ -1.09
CDH8-212ENST00000584506 USPL1Q5W0Q7 1092 aa8.22□□□□□ -1.09
CDH8-212ENST00000584506 POTEEQ6S8J3 1075 aa8.22□□□□□ -1.09
CDH8-212ENST00000584506 PLEKHM2Q8IWE5 1019 aa8.22□□□□□ -1.09
CDH8-212ENST00000584506 FLAD1Q8NFF5 587 aa8.22□□□□□ -1.09
CDH8-212ENST00000584506 OSBPL3Q9H4L5 887 aa8.22□□□□□ -1.09
CDH8-212ENST00000584506 DDX60Q8IY21 1712 aaKnown RBP8.22□□□□□ -1.09
CDH8-212ENST00000584506 UBN2Q6ZU65 1347 aa8.22□□□□□ -1.09
CDH8-212ENST00000584506 USP42Q9H9J4 1324 aaKnown RBP8.22□□□□□ -1.09
CDH8-212ENST00000584506 COL24A1Q17RW2 1714 aa8.21□□□□□ -1.09
CDH8-212ENST00000584506 ANKRD18BA2A2Z9 1011 aa8.21□□□□□ -1.1
CDH8-212ENST00000584506 EVI5O60447 810 aa8.21□□□□□ -1.1
CDH8-212ENST00000584506 PHF14O94880 888 aa8.21□□□□□ -1.1
CDH8-212ENST00000584506 RFX5P48382 616 aaPredicted RBP8.21□□□□□ -1.1
CDH8-212ENST00000584506 CTSWP56202 376 aa8.21□□□□□ -1.1
CDH8-212ENST00000584506 MAP3K9P80192 1104 aa8.21□□□□□ -1.1
CDH8-212ENST00000584506 PLCB2Q00722 1185 aa8.21□□□□□ -1.1
CDH8-212ENST00000584506 PTPN12Q05209 780 aaKnown RBP8.21□□□□□ -1.1
CDH8-212ENST00000584506 BMP2KLQ5H9B9 411 aa8.21□□□□□ -1.1
CDH8-212ENST00000584506 TAF7LQ5H9L4 462 aa8.21□□□□□ -1.1
CDH8-212ENST00000584506 TPTE2Q6XPS3 522 aa8.21□□□□□ -1.1
CDH8-212ENST00000584506 C16orf71Q8IYS4 520 aaPredicted RBP8.21□□□□□ -1.1
CDH8-212ENST00000584506 GPATCH3Q96I76 525 aa8.21□□□□□ -1.1
CDH8-212ENST00000584506 BACH2Q9BYV9 841 aa8.21□□□□□ -1.1
CDH8-212ENST00000584506 BCL11AQ9H165 835 aa8.21□□□□□ -1.1
CDH8-212ENST00000584506 BCL2L12Q9HB09 334 aa8.21□□□□□ -1.1
CDH8-212ENST00000584506 ANO8Q9HCE9 1232 aaPredicted RBP8.21□□□□□ -1.1
CDH8-212ENST00000584506 PA2G4Q9UQ80 394 aaKnown RBP8.21□□□□□ -1.1
CDH8-212ENST00000584506 FAM177BA6PVY3 158 aa8.2□□□□□ -1.1
CDH8-212ENST00000584506 EYA2O00167 538 aa8.2□□□□□ -1.1
CDH8-212ENST00000584506 CIAO1O76071 339 aa8.2□□□□□ -1.1
CDH8-212ENST00000584506 NTSR2O95665 410 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms