RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 COL4A1P02462 1669 aa34.28■■■■□ 3.08
SMARCD2-210ENST00000584400 COL4A5P29400 1685 aa34.28■■■■□ 3.08
SMARCD2-210ENST00000584400 ZBED9Q6R2W3 1325 aa34.28■■■■□ 3.08
SMARCD2-210ENST00000584400 KIF16BQ96L93 1317 aa34.28■■■■□ 3.08
SMARCD2-210ENST00000584400 HSPA6P17066 643 aa34.27■■■■□ 3.08
SMARCD2-210ENST00000584400 ATP2B4P23634 1241 aa34.27■■■■□ 3.08
SMARCD2-210ENST00000584400 LMOD1P29536 600 aaPredicted RBP34.27■■■■□ 3.08
SMARCD2-210ENST00000584400 DUOX1Q9NRD9 1551 aa34.27■■■■□ 3.08
SMARCD2-210ENST00000584400 UTYO14607 1347 aa34.27■■■■□ 3.08
SMARCD2-210ENST00000584400 RIMBP2O15034 1052 aa34.26■■■■□ 3.08
SMARCD2-210ENST00000584400 TNIP1Q15025 636 aa34.26■■■■□ 3.08
SMARCD2-210ENST00000584400 LMBR1LQ6UX01 489 aa34.26■■■■□ 3.08
SMARCD2-210ENST00000584400 MINPP1Q9UNW1 487 aa34.26■■■■□ 3.08
SMARCD2-210ENST00000584400 MYH3P11055 1940 aa34.26■■■■□ 3.07
SMARCD2-210ENST00000584400 G3V3G9 751 aa34.25■■■■□ 3.07
SMARCD2-210ENST00000584400 CCT4P50991 539 aaKnown RBP34.25■■■■□ 3.07
SMARCD2-210ENST00000584400 CCDC57Q2TAC2 916 aa34.25■■■■□ 3.07
SMARCD2-210ENST00000584400 DCAF8Q5TAQ9 597 aa34.25■■■■□ 3.07
SMARCD2-210ENST00000584400 CIAPIN1Q6FI81 312 aa34.25■■■■□ 3.07
SMARCD2-210ENST00000584400 TAF1DQ9H5J8 278 aaPredicted RBP34.25■■■■□ 3.07
SMARCD2-210ENST00000584400 CXCL9Q07325 125 aa34.24■■■■□ 3.07
SMARCD2-210ENST00000584400 PNMA8AQ86V59 439 aaPredicted RBP34.24■■■■□ 3.07
SMARCD2-210ENST00000584400 ARHGAP45Q92619 1136 aa34.24■■■■□ 3.07
SMARCD2-210ENST00000584400 ANKRD2Q9GZV1 360 aa34.24■■■■□ 3.07
SMARCD2-210ENST00000584400 NBPF7P0C2Y1 421 aaPredicted RBP34.23■■■■□ 3.07
SMARCD2-210ENST00000584400 IPO8O15397 1037 aaKnown RBP34.22■■■■□ 3.07
SMARCD2-210ENST00000584400 EPHX2P34913 555 aa34.22■■■■□ 3.07
SMARCD2-210ENST00000584400 TAF7LQ5H9L4 462 aa34.22■■■■□ 3.07
SMARCD2-210ENST00000584400 EPHA10Q5JZY3 1008 aa34.2■■■■□ 3.07
SMARCD2-210ENST00000584400 SUCLG2Q96I99 432 aa34.2■■■■□ 3.07
SMARCD2-210ENST00000584400 DBNDD1Q9H9R9 158 aa34.2■■■■□ 3.07
SMARCD2-210ENST00000584400 LEMD3Q9Y2U8 911 aa34.2■■■■□ 3.07
SMARCD2-210ENST00000584400 SCN4AP35499 1836 aa34.2■■■■□ 3.07
SMARCD2-210ENST00000584400 LDHDQ86WU2 507 aa34.19■■■■□ 3.06
SMARCD2-210ENST00000584400 LTBP1Q14766 1721 aa34.18■■■■□ 3.06
SMARCD2-210ENST00000584400 ECE2O60344 883 aa34.18■■■■□ 3.06
SMARCD2-210ENST00000584400 RAD17O75943 681 aa34.18■■■■□ 3.06
SMARCD2-210ENST00000584400 CHADLQ6NUI6 762 aa34.18■■■■□ 3.06
SMARCD2-210ENST00000584400 USP44Q9H0E7 712 aa34.18■■■■□ 3.06
SMARCD2-210ENST00000584400 HDAC5Q9UQL6 1122 aa34.18■■■■□ 3.06
SMARCD2-210ENST00000584400 YDJCA8MPS7 323 aa34.17■■■■□ 3.06
SMARCD2-210ENST00000584400 SCNN1DP51172 638 aa34.17■■■■□ 3.06
SMARCD2-210ENST00000584400 APLP1P51693 650 aa34.17■■■■□ 3.06
SMARCD2-210ENST00000584400 DOK7Q18PE1 504 aa34.17■■■■□ 3.06
SMARCD2-210ENST00000584400 EAPPQ56P03 285 aaPredicted RBP34.17■■■■□ 3.06
SMARCD2-210ENST00000584400 GPR101Q96P66 508 aaPredicted RBP34.17■■■■□ 3.06
SMARCD2-210ENST00000584400 MED23Q9ULK4 1368 aa34.14■■■■□ 3.06
SMARCD2-210ENST00000584400 KCNJ4P48050 445 aa34.14■■■■□ 3.06
SMARCD2-210ENST00000584400 CHRNDQ07001 517 aa34.14■■■■□ 3.06
SMARCD2-210ENST00000584400 RABL6Q3YEC7 729 aaPredicted RBP34.14■■■■□ 3.06
SMARCD2-210ENST00000584400 LDHAL6AQ6ZMR3 332 aa34.14■■■■□ 3.06
SMARCD2-210ENST00000584400 KAZALD1Q96I82 304 aa34.14■■■■□ 3.06
SMARCD2-210ENST00000584400 BICC1Q9H694 974 aaKnown RBP34.14■■■■□ 3.06
SMARCD2-210ENST00000584400 GPRC5DQ9NZD1 345 aa34.14■■■■□ 3.06
SMARCD2-210ENST00000584400 CLEC11AQ9Y240 323 aa34.14■■■■□ 3.06
SMARCD2-210ENST00000584400 PODNQ7Z5L7 613 aa34.13■■■■□ 3.05
SMARCD2-210ENST00000584400 ZNF804BA4D1E1 1349 aa34.12■■■■□ 3.05
SMARCD2-210ENST00000584400 GMPSP49915 693 aaPredicted RBP34.12■■■■□ 3.05
SMARCD2-210ENST00000584400 USP50Q70EL3 339 aaPredicted RBP34.12■■■■□ 3.05
SMARCD2-210ENST00000584400 CNNM1Q9NRU3 951 aa34.12■■■■□ 3.05
SMARCD2-210ENST00000584400 EPS15P42566 896 aa34.11■■■■□ 3.05
SMARCD2-210ENST00000584400 FRAT1Q92837 279 aaPredicted RBP34.11■■■■□ 3.05
SMARCD2-210ENST00000584400 ADARB2Q9NS39 739 aaKnown RBP34.11■■■■□ 3.05
SMARCD2-210ENST00000584400 UBTFL1P0CB47 393 aaPredicted RBP34.1■■■■□ 3.05
SMARCD2-210ENST00000584400 RPS12P25398 132 aaKnown RBP34.1■■■■□ 3.05
SMARCD2-210ENST00000584400 PSMD14O00487 310 aa34.09■■■■□ 3.05
SMARCD2-210ENST00000584400 BCAR3O75815 825 aa34.09■■■■□ 3.05
SMARCD2-210ENST00000584400 POTEIP0CG38 1075 aa34.09■■■■□ 3.05
SMARCD2-210ENST00000584400 POTEJP0CG39 1038 aa34.09■■■■□ 3.05
SMARCD2-210ENST00000584400 ATF7IPQ6VMQ6 1270 aa34.09■■■■□ 3.05
SMARCD2-210ENST00000584400 DPF2Q92785 391 aa34.09■■■■□ 3.05
SMARCD2-210ENST00000584400 ZNF594Q96JF6 807 aaPredicted RBP34.09■■■■□ 3.05
SMARCD2-210ENST00000584400 INTS3Q68E01 1043 aaKnown RBP34.08■■■■□ 3.05
SMARCD2-210ENST00000584400 H7C1D1 291 aa34.07■■■■□ 3.04
SMARCD2-210ENST00000584400 ANKRD44Q8N8A2 993 aa34.07■■■■□ 3.04
SMARCD2-210ENST00000584400 COA1Q9GZY4 146 aa34.07■■■■□ 3.04
SMARCD2-210ENST00000584400 TRIM27P14373 513 aa34.05■■■■□ 3.04
SMARCD2-210ENST00000584400 ZKSCAN2Q63HK3 967 aa34.05■■■■□ 3.04
SMARCD2-210ENST00000584400 CNOT7Q9UIV1 285 aaKnown RBP34.05■■■■□ 3.04
SMARCD2-210ENST00000584400 VIL1P09327 827 aaKnown RBP34.04■■■■□ 3.04
SMARCD2-210ENST00000584400 SPEF2Q9C093 1822 aa34.04■■■■□ 3.04
SMARCD2-210ENST00000584400 TAF5LO75529 589 aa34.03■■■■□ 3.04
SMARCD2-210ENST00000584400 KCNQ5Q9NR82 932 aa34.03■■■■□ 3.04
SMARCD2-210ENST00000584400 ZBTB12Q9Y330 459 aaPredicted RBP34.03■■■■□ 3.04
SMARCD2-210ENST00000584400 USP17L3A6NCW0 530 aa34.02■■■■□ 3.04
SMARCD2-210ENST00000584400 USP17L4A6NCW7 530 aa34.02■■■■□ 3.04
SMARCD2-210ENST00000584400 WTIPA6NIX2 430 aaPredicted RBP34.02■■■■□ 3.04
SMARCD2-210ENST00000584400 GNAI3P08754 354 aa34.02■■■■□ 3.04
SMARCD2-210ENST00000584400 USP17L1Q7RTZ2 530 aa34.02■■■■□ 3.04
SMARCD2-210ENST00000584400 HELBQ8NG08 1087 aaPredicted RBP34.02■■■■□ 3.04
SMARCD2-210ENST00000584400 MROH5Q6ZUA9 1318 aa34.02■■■■□ 3.04
SMARCD2-210ENST00000584400 C15orf52Q6ZUT6 534 aaKnown RBP34.01■■■■□ 3.03
SMARCD2-210ENST00000584400 MICALL2Q8IY33 904 aa34.01■■■■□ 3.03
SMARCD2-210ENST00000584400 PLIN1O60240 522 aa34■■■■□ 3.03
SMARCD2-210ENST00000584400 CNTROBQ8N137 903 aa34■■■■□ 3.03
SMARCD2-210ENST00000584400 AGBL3Q8NEM8 1001 aa34■■■■□ 3.03
SMARCD2-210ENST00000584400 RSBN1LQ6PCB5 846 aaPredicted RBP33.99■■■■□ 3.03
SMARCD2-210ENST00000584400 MAP1SQ66K74 1059 aaPredicted RBP33.98■■■■□ 3.03
SMARCD2-210ENST00000584400 TXNRD3Q86VQ6 643 aa33.98■■■■□ 3.03
SMARCD2-210ENST00000584400 ZC3H15Q8WU90 426 aaKnown RBP33.98■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms