RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 PIP4K2AP48426 406 aaPredicted RBP14.62□□□□□ -0.07
CCDC47-206ENST00000584112 TNIP1Q15025 636 aa14.62□□□□□ -0.07
CCDC47-206ENST00000584112 SULF1Q8IWU6 871 aa14.62□□□□□ -0.07
CCDC47-206ENST00000584112 MIS18AQ9NYP9 233 aa14.62□□□□□ -0.07
CCDC47-206ENST00000584112 TMEM265A0A087WTH1 108 aa14.61□□□□□ -0.07
CCDC47-206ENST00000584112 YDJCA8MPS7 323 aa14.61□□□□□ -0.07
CCDC47-206ENST00000584112 SREBF2Q12772 1141 aa14.61□□□□□ -0.07
CCDC47-206ENST00000584112 SLC9C1Q4G0N8 1177 aa14.61□□□□□ -0.07
CCDC47-206ENST00000584112 ERO1AQ96HE7 468 aa14.61□□□□□ -0.07
CCDC47-206ENST00000584112 PTCH2Q9Y6C5 1203 aa14.61□□□□□ -0.07
CCDC47-206ENST00000584112 PIEZO1Q92508 2521 aa14.61□□□□□ -0.07
CCDC47-206ENST00000584112 RPTORQ8N122 1335 aa14.61□□□□□ -0.07
CCDC47-206ENST00000584112 NBPF26B4DH59 902 aa14.6□□□□□ -0.07
CCDC47-206ENST00000584112 LMOD3Q0VAK6 560 aa14.6□□□□□ -0.07
CCDC47-206ENST00000584112 NBPF10Q6P3W6 841 aaKnown RBP14.6□□□□□ -0.07
CCDC47-206ENST00000584112 NR2E3Q9Y5X4 410 aa14.6□□□□□ -0.07
CCDC47-206ENST00000584112 ANKRD36CQ5JPF3 1778 aa14.6□□□□□ -0.07
CCDC47-206ENST00000584112 PPEF1O14829 653 aaPredicted RBP14.59□□□□□ -0.07
CCDC47-206ENST00000584112 RIPK4P57078 832 aa14.59□□□□□ -0.07
CCDC47-206ENST00000584112 EIF4A1P60842 406 aaKnown RBP14.59□□□□□ -0.07
CCDC47-206ENST00000584112 CRY2Q49AN0 593 aa14.59□□□□□ -0.07
CCDC47-206ENST00000584112 TPTE2Q6XPS3 522 aa14.59□□□□□ -0.07
CCDC47-206ENST00000584112 THUMPD2Q9BTF0 503 aaKnown RBP14.59□□□□□ -0.07
CCDC47-206ENST00000584112 SCAF8Q9UPN6 1271 aaKnown RBP14.59□□□□□ -0.07
CCDC47-206ENST00000584112 ABCC12Q96J65 1359 aa14.59□□□□□ -0.07
CCDC47-206ENST00000584112 FKBP1BP68106 108 aa14.58□□□□□ -0.08
CCDC47-206ENST00000584112 WDR43Q15061 677 aaKnown RBP eCLIP14.58□□□□□ -0.08
CCDC47-206ENST00000584112 SH3TC2Q8TF17 1288 aa14.58□□□□□ -0.08
CCDC47-206ENST00000584112 TMPOP42166 694 aaKnown RBP14.57□□□□□ -0.08
CCDC47-206ENST00000584112 MAP3K12Q12852 859 aa14.57□□□□□ -0.08
CCDC47-206ENST00000584112 PRAMEF18Q5VWM3 479 aa14.57□□□□□ -0.08
CCDC47-206ENST00000584112 NBPF11Q86T75 865 aa14.57□□□□□ -0.08
CCDC47-206ENST00000584112 GUCD1Q96NT3 240 aa14.57□□□□□ -0.08
CCDC47-206ENST00000584112 BABAM1Q9NWV8 329 aa14.57□□□□□ -0.08
CCDC47-206ENST00000584112 TSPYL4Q9UJ04 414 aa14.57□□□□□ -0.08
CCDC47-206ENST00000584112 NIP7Q9Y221 180 aaKnown RBP eCLIP14.57□□□□□ -0.08
CCDC47-206ENST00000584112 PSMD14O00487 310 aa14.56□□□□□ -0.08
CCDC47-206ENST00000584112 BCAMP50895 628 aa14.56□□□□□ -0.08
CCDC47-206ENST00000584112 GRIPAP1Q4V328 841 aa14.56□□□□□ -0.08
CCDC47-206ENST00000584112 HTATIP2Q9BUP3 242 aa14.56□□□□□ -0.08
CCDC47-206ENST00000584112 KIF4BQ2VIQ3 1234 aa14.55□□□□□ -0.08
CCDC47-206ENST00000584112 KIF6Q6ZMV9 814 aa14.55□□□□□ -0.08
CCDC47-206ENST00000584112 UBE2Q1Q7Z7E8 422 aa14.55□□□□□ -0.08
CCDC47-206ENST00000584112 NUTM1Q86Y26 1132 aa14.55□□□□□ -0.08
CCDC47-206ENST00000584112 DPF2Q92785 391 aa14.55□□□□□ -0.08
CCDC47-206ENST00000584112 RPGRQ92834 1020 aaKnown RBP14.55□□□□□ -0.08
CCDC47-206ENST00000584112 RUNDC1Q96C34 613 aa14.55□□□□□ -0.08
CCDC47-206ENST00000584112 PRKRIP1Q9H875 184 aaPredicted RBP14.55□□□□□ -0.08
CCDC47-206ENST00000584112 ERVV-1B6SEH8 477 aa14.54□□□□□ -0.08
CCDC47-206ENST00000584112 TNFRSF10AO00220 468 aa14.54□□□□□ -0.08
CCDC47-206ENST00000584112 IGF2BP3O00425 579 aaKnown RBP eCLIP14.54□□□□□ -0.08
CCDC47-206ENST00000584112 ALDH1A1P00352 501 aa14.54□□□□□ -0.08
CCDC47-206ENST00000584112 TTLL12Q14166 644 aaPredicted RBP14.54□□□□□ -0.08
CCDC47-206ENST00000584112 IFNL1Q8IU54 200 aa14.54□□□□□ -0.08
CCDC47-206ENST00000584112 FAM161BQ96MY7 647 aa14.54□□□□□ -0.08
CCDC47-206ENST00000584112 VPS33BQ9H267 617 aa14.54□□□□□ -0.08
CCDC47-206ENST00000584112 RRP7AQ9Y3A4 280 aaKnown RBP14.54□□□□□ -0.08
CCDC47-206ENST00000584112 MAP3K15Q6ZN16 1313 aa14.53□□□□□ -0.08
CCDC47-206ENST00000584112 ECM2O94769 699 aaPredicted RBP14.53□□□□□ -0.08
CCDC47-206ENST00000584112 MYL6BP14649 208 aa14.53□□□□□ -0.08
CCDC47-206ENST00000584112 GTF2E1P29083 439 aaPredicted RBP14.53□□□□□ -0.08
CCDC47-206ENST00000584112 HOXA10P31260 410 aaPredicted RBP14.53□□□□□ -0.08
CCDC47-206ENST00000584112 KIAA2012Q0VF49 1180 aa14.53□□□□□ -0.08
CCDC47-206ENST00000584112 HLFQ16534 295 aa14.53□□□□□ -0.08
CCDC47-206ENST00000584112 ANGEL2Q5VTE6 544 aaKnown RBP14.53□□□□□ -0.08
CCDC47-206ENST00000584112 CCDC146Q8IYE0 955 aa14.53□□□□□ -0.08
CCDC47-206ENST00000584112 NGEFQ8N5V2 710 aa14.53□□□□□ -0.08
CCDC47-206ENST00000584112 RTFDC1Q9BY42 306 aaPredicted RBP14.53□□□□□ -0.08
CCDC47-206ENST00000584112 NYXQ9GZU5 481 aa14.53□□□□□ -0.08
CCDC47-206ENST00000584112 CRHR2Q13324 411 aa14.52□□□□□ -0.09
CCDC47-206ENST00000584112 MTFR1Q15390 333 aa14.52□□□□□ -0.09
CCDC47-206ENST00000584112 NEUROD2Q15784 382 aa14.52□□□□□ -0.09
CCDC47-206ENST00000584112 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.52□□□□□ -0.09
CCDC47-206ENST00000584112 TAF1P21675 1872 aa14.52□□□□□ -0.09
CCDC47-206ENST00000584112 RIC1Q4ADV7 1423 aa14.51□□□□□ -0.09
CCDC47-206ENST00000584112 IRS2Q9Y4H2 1338 aa14.51□□□□□ -0.09
CCDC47-206ENST00000584112 ZSWIM8A7E2V4 1837 aa14.51□□□□□ -0.09
CCDC47-206ENST00000584112 ZEB1P37275 1124 aaPredicted RBP14.51□□□□□ -0.09
CCDC47-206ENST00000584112 SP3Q02447 781 aa14.51□□□□□ -0.09
CCDC47-206ENST00000584112 PTPN12Q05209 780 aaKnown RBP14.51□□□□□ -0.09
CCDC47-206ENST00000584112 LRIT3Q3SXY7 679 aa14.51□□□□□ -0.09
CCDC47-206ENST00000584112 SPRYD7Q5W111 196 aa14.51□□□□□ -0.09
CCDC47-206ENST00000584112 C3orf67Q6ZVT6 689 aa14.51□□□□□ -0.09
CCDC47-206ENST00000584112 GDF15Q99988 308 aa14.51□□□□□ -0.09
CCDC47-206ENST00000584112 KCNQ5Q9NR82 932 aa14.51□□□□□ -0.09
CCDC47-206ENST00000584112 LAMB2P55268 1798 aa14.51□□□□□ -0.09
CCDC47-206ENST00000584112 ALPK3Q96L96 1907 aa14.51□□□□□ -0.09
CCDC47-206ENST00000584112 IBTKQ9P2D0 1353 aaPredicted RBP14.5□□□□□ -0.09
CCDC47-206ENST00000584112 SYNGAP1Q96PV0 1343 aa14.5□□□□□ -0.09
CCDC47-206ENST00000584112 EVI5O60447 810 aa14.5□□□□□ -0.09
CCDC47-206ENST00000584112 TTLL7Q6ZT98 887 aa14.5□□□□□ -0.09
CCDC47-206ENST00000584112 SUPT20HQ8NEM7 779 aa14.5□□□□□ -0.09
CCDC47-206ENST00000584112 CRAMP1Q96RY5 1269 aa14.5□□□□□ -0.09
CCDC47-206ENST00000584112 ADAMTS8Q9UP79 889 aa14.5□□□□□ -0.09
CCDC47-206ENST00000584112 ATP6V0A2Q9Y487 856 aa14.5□□□□□ -0.09
CCDC47-206ENST00000584112 NCOR1O75376 2440 aa14.49□□□□□ -0.09
CCDC47-206ENST00000584112 EIF2S2P20042 333 aaKnown RBP14.49□□□□□ -0.09
CCDC47-206ENST00000584112 SCARF1Q14162 830 aa14.49□□□□□ -0.09
CCDC47-206ENST00000584112 DPP8Q6V1X1 898 aaPredicted RBP14.49□□□□□ -0.09
CCDC47-206ENST00000584112 SYMPKQ92797 1274 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms