RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 SOGA3Q5TF21 947 aa16.23■□□□□ 0.19
ERBB2-215ENST00000583391 PUS3Q9BZE2 481 aaKnown RBP16.23■□□□□ 0.19
ERBB2-215ENST00000583391 CNNM1Q9NRU3 951 aa16.23■□□□□ 0.19
ERBB2-215ENST00000583391 BSDC1Q9NW68 430 aaPredicted RBP16.23■□□□□ 0.19
ERBB2-215ENST00000583391 ATP8B2P98198 1209 aa16.22■□□□□ 0.19
ERBB2-215ENST00000583391 RASSF7Q02833 373 aa16.22■□□□□ 0.19
ERBB2-215ENST00000583391 POLA2Q14181 598 aa16.22■□□□□ 0.19
ERBB2-215ENST00000583391 LDHAL6AQ6ZMR3 332 aa16.22■□□□□ 0.19
ERBB2-215ENST00000583391 SP8Q8IXZ3 490 aa16.22■□□□□ 0.19
ERBB2-215ENST00000583391 DCAF8L1A6NGE4 600 aa16.21■□□□□ 0.19
ERBB2-215ENST00000583391 GPSM2P81274 684 aa16.21■□□□□ 0.19
ERBB2-215ENST00000583391 LRRC24Q50LG9 513 aa16.21■□□□□ 0.19
ERBB2-215ENST00000583391 CC2D2BQ6DHV5 1058 aa16.21■□□□□ 0.19
ERBB2-215ENST00000583391 ARHGAP27Q6ZUM4 889 aa16.21■□□□□ 0.19
ERBB2-215ENST00000583391 SSH3Q8TE77 659 aa16.21■□□□□ 0.19
ERBB2-215ENST00000583391 NFKBIEO00221 500 aa16.2■□□□□ 0.18
ERBB2-215ENST00000583391 CHRNDQ07001 517 aa16.2■□□□□ 0.18
ERBB2-215ENST00000583391 DPP8Q6V1X1 898 aaPredicted RBP16.2■□□□□ 0.18
ERBB2-215ENST00000583391 SIRT2Q8IXJ6 389 aa16.2■□□□□ 0.18
ERBB2-215ENST00000583391 RPAP2Q8IXW5 612 aaPredicted RBP16.2■□□□□ 0.18
ERBB2-215ENST00000583391 TAOK3Q9H2K8 898 aa16.2■□□□□ 0.18
ERBB2-215ENST00000583391 COPRSQ9NQ92 184 aa16.2■□□□□ 0.18
ERBB2-215ENST00000583391 ANKIB1Q9P2G1 1089 aa16.2■□□□□ 0.18
ERBB2-215ENST00000583391 MINPP1Q9UNW1 487 aa16.2■□□□□ 0.18
ERBB2-215ENST00000583391 NSFL1CQ9UNZ2 370 aaKnown RBP16.2■□□□□ 0.18
ERBB2-215ENST00000583391 XDHP47989 1333 aa16.19■□□□□ 0.18
ERBB2-215ENST00000583391 PSME4Q14997 1843 aa16.19■□□□□ 0.18
ERBB2-215ENST00000583391 EYA2O00167 538 aa16.19■□□□□ 0.18
ERBB2-215ENST00000583391 GRIN3BO60391 1043 aa16.19■□□□□ 0.18
ERBB2-215ENST00000583391 HMMRO75330 724 aa16.19■□□□□ 0.18
ERBB2-215ENST00000583391 NEFLP07196 543 aa16.19■□□□□ 0.18
ERBB2-215ENST00000583391 RTKN2Q8IZC4 609 aa16.19■□□□□ 0.18
ERBB2-215ENST00000583391 MPNDQ8N594 471 aa16.19■□□□□ 0.18
ERBB2-215ENST00000583391 HELBQ8NG08 1087 aaPredicted RBP16.19■□□□□ 0.18
ERBB2-215ENST00000583391 PCDHB15Q9Y5E8 787 aa16.19■□□□□ 0.18
ERBB2-215ENST00000583391 UFL1O94874 794 aa16.18■□□□□ 0.18
ERBB2-215ENST00000583391 FKBP4Q02790 459 aaKnown RBP eCLIP16.18■□□□□ 0.18
ERBB2-215ENST00000583391 METTL24Q5JXM2 366 aa16.18■□□□□ 0.18
ERBB2-215ENST00000583391 MROH5Q6ZUA9 1318 aa16.18■□□□□ 0.18
ERBB2-215ENST00000583391 COL4A5P29400 1685 aa16.18■□□□□ 0.18
ERBB2-215ENST00000583391 SCN9AQ15858 1988 aa16.17■□□□□ 0.18
ERBB2-215ENST00000583391 TAF5LO75529 589 aa16.17■□□□□ 0.18
ERBB2-215ENST00000583391 SURF6O75683 361 aaKnown RBP16.17■□□□□ 0.18
ERBB2-215ENST00000583391 CIAO1O76071 339 aa16.17■□□□□ 0.18
ERBB2-215ENST00000583391 OS9Q13438 667 aaPredicted RBP16.17■□□□□ 0.18
ERBB2-215ENST00000583391 AAMPQ13685 434 aa16.17■□□□□ 0.18
ERBB2-215ENST00000583391 GRIPAP1Q4V328 841 aa16.17■□□□□ 0.18
ERBB2-215ENST00000583391 ATG9AQ7Z3C6 839 aa16.17■□□□□ 0.18
ERBB2-215ENST00000583391 GPR101Q96P66 508 aaPredicted RBP16.17■□□□□ 0.18
ERBB2-215ENST00000583391 ANKRD2Q9GZV1 360 aa16.17■□□□□ 0.18
ERBB2-215ENST00000583391 GGA1Q9UJY5 639 aa16.17■□□□□ 0.18
ERBB2-215ENST00000583391 EXOC6BQ9Y2D4 811 aa16.17■□□□□ 0.18
ERBB2-215ENST00000583391 RIPOR2Q9Y4F9 1068 aa16.17■□□□□ 0.18
ERBB2-215ENST00000583391 LTBP3Q9NS15 1303 aa16.17■□□□□ 0.18
ERBB2-215ENST00000583391 C6orf229H3BNL8 230 aa16.16■□□□□ 0.18
ERBB2-215ENST00000583391 KCNJ4P48050 445 aa16.16■□□□□ 0.18
ERBB2-215ENST00000583391 PSMD1Q99460 953 aa16.16■□□□□ 0.18
ERBB2-215ENST00000583391 ZNF277Q9NRM2 450 aaPredicted RBP16.16■□□□□ 0.18
ERBB2-215ENST00000583391 PODXL2Q9NZ53 605 aa16.16■□□□□ 0.18
ERBB2-215ENST00000583391 POLLQ9UGP5 575 aa16.16■□□□□ 0.18
ERBB2-215ENST00000583391 FBXO3Q9UK99 471 aa16.16■□□□□ 0.18
ERBB2-215ENST00000583391 ZNF646O15015 1829 aaPredicted RBP16.16■□□□□ 0.18
ERBB2-215ENST00000583391 SNAP23O00161 211 aa16.15■□□□□ 0.18
ERBB2-215ENST00000583391 IL15P40933 162 aaPredicted RBP16.15■□□□□ 0.18
ERBB2-215ENST00000583391 G3BP1Q13283 466 aaKnown RBP eCLIP16.15■□□□□ 0.18
ERBB2-215ENST00000583391 SUPT20HQ8NEM7 779 aa16.15■□□□□ 0.18
ERBB2-215ENST00000583391 TBC1D16Q8TBP0 767 aa16.15■□□□□ 0.18
ERBB2-215ENST00000583391 RTFDC1Q9BY42 306 aaPredicted RBP16.15■□□□□ 0.18
ERBB2-215ENST00000583391 ZNF609O15014 1411 aa16.14■□□□□ 0.17
ERBB2-215ENST00000583391 WTIPA6NIX2 430 aaPredicted RBP16.14■□□□□ 0.17
ERBB2-215ENST00000583391 ATP2B4P23634 1241 aa16.14■□□□□ 0.17
ERBB2-215ENST00000583391 PRELPP51888 382 aa16.14■□□□□ 0.17
ERBB2-215ENST00000583391 VGLL2Q8N8G2 317 aa16.14■□□□□ 0.17
ERBB2-215ENST00000583391 ZNF804BA4D1E1 1349 aa16.14■□□□□ 0.17
ERBB2-215ENST00000583391 APBB1O00213 710 aa16.13■□□□□ 0.17
ERBB2-215ENST00000583391 PPIP5K2O43314 1243 aa16.13■□□□□ 0.17
ERBB2-215ENST00000583391 KLRK1P26718 216 aa16.13■□□□□ 0.17
ERBB2-215ENST00000583391 IARSP41252 1262 aaKnown RBP16.13■□□□□ 0.17
ERBB2-215ENST00000583391 AOC3Q16853 763 aa16.13■□□□□ 0.17
ERBB2-215ENST00000583391 CEP126Q9P2H0 1117 aa16.13■□□□□ 0.17
ERBB2-215ENST00000583391 LEMD3Q9Y2U8 911 aa16.13■□□□□ 0.17
ERBB2-215ENST00000583391 NOP58Q9Y2X3 529 aaKnown RBP16.13■□□□□ 0.17
ERBB2-215ENST00000583391 MED23Q9ULK4 1368 aa16.13■□□□□ 0.17
ERBB2-215ENST00000583391 RIMBP2O15034 1052 aa16.12■□□□□ 0.17
ERBB2-215ENST00000583391 PDE8BO95263 885 aa16.12■□□□□ 0.17
ERBB2-215ENST00000583391 LMNB1P20700 586 aa16.12■□□□□ 0.17
ERBB2-215ENST00000583391 TFCP2Q12800 502 aa16.12■□□□□ 0.17
ERBB2-215ENST00000583391 PUM3Q15397 648 aaKnown RBP16.12■□□□□ 0.17
ERBB2-215ENST00000583391 EYA3Q99504 573 aa16.12■□□□□ 0.17
ERBB2-215ENST00000583391 RNF181Q9P0P0 153 aa16.12■□□□□ 0.17
ERBB2-215ENST00000583391 SASH1O94885 1247 aa16.11■□□□□ 0.17
ERBB2-215ENST00000583391 ATP2B3Q16720 1220 aa16.11■□□□□ 0.17
ERBB2-215ENST00000583391 WASHC4Q2M389 1173 aa16.11■□□□□ 0.17
ERBB2-215ENST00000583391 HSP90AB4PQ58FF6 505 aa16.11■□□□□ 0.17
ERBB2-215ENST00000583391 C9orf131Q5VYM1 1079 aa16.11■□□□□ 0.17
ERBB2-215ENST00000583391 LARGE2Q8N3Y3 721 aa16.11■□□□□ 0.17
ERBB2-215ENST00000583391 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.11■□□□□ 0.17
ERBB2-215ENST00000583391 KIAA2012Q0VF49 1180 aa16.1■□□□□ 0.17
ERBB2-215ENST00000583391 HDAC1Q13547 482 aaPredicted RBP16.1■□□□□ 0.17
ERBB2-215ENST00000583391 UBE4AQ14139 1066 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms