RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 GBA2Q9HCG7 927 aaPredicted RBP21.04■□□□□ 0.96
SREBF1-221ENST00000583080 ASTN2O75129 1339 aaPredicted RBP21.04■□□□□ 0.96
SREBF1-221ENST00000583080 SLC34A2O95436 690 aa21.03■□□□□ 0.96
SREBF1-221ENST00000583080 RPS12P25398 132 aaKnown RBP21.03■□□□□ 0.96
SREBF1-221ENST00000583080 DGKZQ13574 1117 aa21.03■□□□□ 0.96
SREBF1-221ENST00000583080 RGMBQ6NW40 437 aa21.03■□□□□ 0.96
SREBF1-221ENST00000583080 CFAP44Q96MT7 982 aa21.03■□□□□ 0.96
SREBF1-221ENST00000583080 EYA3Q99504 573 aa21.03■□□□□ 0.96
SREBF1-221ENST00000583080 RPS8P62241 208 aaKnown RBP21.02■□□□□ 0.96
SREBF1-221ENST00000583080 KIF4BQ2VIQ3 1234 aa21.02■□□□□ 0.96
SREBF1-221ENST00000583080 SEC31BQ9NQW1 1179 aa21.02■□□□□ 0.96
SREBF1-221ENST00000583080 MBIPQ9NS73 344 aa21.02■□□□□ 0.96
SREBF1-221ENST00000583080 HYPKQ9NX55 129 aa21.02■□□□□ 0.96
SREBF1-221ENST00000583080 TRIM28Q13263 835 aaKnown RBP21.01■□□□□ 0.95
SREBF1-221ENST00000583080 DCPSQ96C86 337 aaKnown RBP21.01■□□□□ 0.95
SREBF1-221ENST00000583080 GGA3Q9NZ52 723 aa21.01■□□□□ 0.95
SREBF1-221ENST00000583080 UFL1O94874 794 aa21■□□□□ 0.95
SREBF1-221ENST00000583080 WDR43Q15061 677 aaKnown RBP eCLIP21■□□□□ 0.95
SREBF1-221ENST00000583080 ADAMTS8Q9UP79 889 aa21■□□□□ 0.95
SREBF1-221ENST00000583080 VIL1P09327 827 aaKnown RBP20.99■□□□□ 0.95
SREBF1-221ENST00000583080 C2orf69Q8N8R5 385 aa20.99■□□□□ 0.95
SREBF1-221ENST00000583080 ZBTB38Q8NAP3 1195 aaPredicted RBP20.99■□□□□ 0.95
SREBF1-221ENST00000583080 PHAXQ9H814 394 aaKnown RBP20.99■□□□□ 0.95
SREBF1-221ENST00000583080 PODXL2Q9NZ53 605 aa20.99■□□□□ 0.95
SREBF1-221ENST00000583080 KIF23Q02241 960 aaPredicted RBP20.98■□□□□ 0.95
SREBF1-221ENST00000583080 RIC3Q7Z5B4 369 aa20.98■□□□□ 0.95
SREBF1-221ENST00000583080 MYD88Q99836 296 aa20.98■□□□□ 0.95
SREBF1-221ENST00000583080 ZC3H12CQ9C0D7 883 aaKnown RBP20.98■□□□□ 0.95
SREBF1-221ENST00000583080 PSME4Q14997 1843 aa20.98■□□□□ 0.95
SREBF1-221ENST00000583080 ZNF609O15014 1411 aa20.97■□□□□ 0.95
SREBF1-221ENST00000583080 ZNF157P51786 506 aaPredicted RBP20.97■□□□□ 0.95
SREBF1-221ENST00000583080 GOLGA2Q08379 1002 aa20.97■□□□□ 0.95
SREBF1-221ENST00000583080 DDX10Q13206 875 aaKnown RBP20.97■□□□□ 0.95
SREBF1-221ENST00000583080 JARID2Q92833 1246 aaPredicted RBP20.97■□□□□ 0.95
SREBF1-221ENST00000583080 CDCA5Q96FF9 252 aa20.97■□□□□ 0.95
SREBF1-221ENST00000583080 CCDC85AQ96PX6 553 aaPredicted RBP20.97■□□□□ 0.95
SREBF1-221ENST00000583080 ANKIB1Q9P2G1 1089 aa20.97■□□□□ 0.95
SREBF1-221ENST00000583080 SLC10A3P09131 477 aa20.96■□□□□ 0.95
SREBF1-221ENST00000583080 ZNF853P0CG23 659 aa20.96■□□□□ 0.95
SREBF1-221ENST00000583080 SULF1Q8IWU6 871 aa20.96■□□□□ 0.95
SREBF1-221ENST00000583080 CCDC102AQ96A19 550 aa20.96■□□□□ 0.95
SREBF1-221ENST00000583080 SAGE1Q9NXZ1 904 aa20.96■□□□□ 0.95
SREBF1-221ENST00000583080 GGA1Q9UJY5 639 aa20.96■□□□□ 0.95
SREBF1-221ENST00000583080 RNF186Q9NXI6 227 aa20.95■□□□□ 0.94
SREBF1-221ENST00000583080 ELL2O00472 640 aaPredicted RBP20.94■□□□□ 0.94
SREBF1-221ENST00000583080 TRPA1O75762 1119 aa20.94■□□□□ 0.94
SREBF1-221ENST00000583080 ZNF280AP59817 542 aaPredicted RBP20.94■□□□□ 0.94
SREBF1-221ENST00000583080 ANGEL2Q5VTE6 544 aaKnown RBP20.94■□□□□ 0.94
SREBF1-221ENST00000583080 RSBN1LQ6PCB5 846 aaPredicted RBP20.94■□□□□ 0.94
SREBF1-221ENST00000583080 G3V3G9 751 aa20.93■□□□□ 0.94
SREBF1-221ENST00000583080 PCCAP05165 728 aaPredicted RBP20.93■□□□□ 0.94
SREBF1-221ENST00000583080 SCARF1Q14162 830 aa20.93■□□□□ 0.94
SREBF1-221ENST00000583080 CCDC152Q4G0S7 254 aa20.93■□□□□ 0.94
SREBF1-221ENST00000583080 DCAF8Q5TAQ9 597 aa20.93■□□□□ 0.94
SREBF1-221ENST00000583080 AKAP11Q9UKA4 1901 aa20.93■□□□□ 0.94
SREBF1-221ENST00000583080 PAPPA2Q9BXP8 1791 aa20.92■□□□□ 0.94
SREBF1-221ENST00000583080 PDE8AO60658 829 aa20.92■□□□□ 0.94
SREBF1-221ENST00000583080 RASAL3Q86YV0 1011 aa20.92■□□□□ 0.94
SREBF1-221ENST00000583080 CCDC191Q8NCU4 936 aa20.92■□□□□ 0.94
SREBF1-221ENST00000583080 AGBL3Q8NEM8 1001 aa20.92■□□□□ 0.94
SREBF1-221ENST00000583080 CSRNP1Q96S65 589 aa20.92■□□□□ 0.94
SREBF1-221ENST00000583080 GMLQ99445 158 aa20.92■□□□□ 0.94
SREBF1-221ENST00000583080 SCAF8Q9UPN6 1271 aaKnown RBP20.92■□□□□ 0.94
SREBF1-221ENST00000583080 ZNF646O15015 1829 aaPredicted RBP20.92■□□□□ 0.94
SREBF1-221ENST00000583080 SPEF2Q9C093 1822 aa20.92■□□□□ 0.94
SREBF1-221ENST00000583080 WTIPA6NIX2 430 aaPredicted RBP20.91■□□□□ 0.94
SREBF1-221ENST00000583080 XDHP47989 1333 aa20.91■□□□□ 0.94
SREBF1-221ENST00000583080 IFT57Q9NWB7 429 aa20.91■□□□□ 0.94
SREBF1-221ENST00000583080 CWC25Q9NXE8 425 aaPredicted RBP20.91■□□□□ 0.94
SREBF1-221ENST00000583080 HSP90B1P14625 803 aaKnown RBP20.9■□□□□ 0.94
SREBF1-221ENST00000583080 C8orf58Q8NAV2 365 aa20.9■□□□□ 0.94
SREBF1-221ENST00000583080 MYOZ2Q9NPC6 264 aa20.9■□□□□ 0.94
SREBF1-221ENST00000583080 APAF1O14727 1248 aa20.89■□□□□ 0.93
SREBF1-221ENST00000583080 SOX10P56693 466 aa20.89■□□□□ 0.93
SREBF1-221ENST00000583080 MOB2Q70IA6 237 aa20.89■□□□□ 0.93
SREBF1-221ENST00000583080 ANKRD18AQ8IVF6 992 aa20.89■□□□□ 0.93
SREBF1-221ENST00000583080 METTL22Q9BUU2 404 aaPredicted RBP20.89■□□□□ 0.93
SREBF1-221ENST00000583080 TNRC18O15417 2968 aaPredicted RBP20.88■□□□□ 0.93
SREBF1-221ENST00000583080 USP17L8P0C7I0 530 aa20.88■□□□□ 0.93
SREBF1-221ENST00000583080 GNAI1P63096 354 aa20.88■□□□□ 0.93
SREBF1-221ENST00000583080 ATP2B4P23634 1241 aa20.87■□□□□ 0.93
SREBF1-221ENST00000583080 CTSWP56202 376 aa20.87■□□□□ 0.93
SREBF1-221ENST00000583080 MXD3Q9BW11 206 aa20.87■□□□□ 0.93
SREBF1-221ENST00000583080 MAP3K2Q9Y2U5 619 aa20.87■□□□□ 0.93
SREBF1-221ENST00000583080 PDE4DIPQ5VU43 2346 aa20.87■□□□□ 0.93
SREBF1-221ENST00000583080 MYH3P11055 1940 aa20.86■□□□□ 0.93
SREBF1-221ENST00000583080 PITPNM2Q9BZ72 1349 aa20.86■□□□□ 0.93
SREBF1-221ENST00000583080 USP17L3A6NCW0 530 aa20.86■□□□□ 0.93
SREBF1-221ENST00000583080 USP17L4A6NCW7 530 aa20.86■□□□□ 0.93
SREBF1-221ENST00000583080 USP17L1Q7RTZ2 530 aa20.86■□□□□ 0.93
SREBF1-221ENST00000583080 MED23Q9ULK4 1368 aa20.85■□□□□ 0.93
SREBF1-221ENST00000583080 IGKV5-2P06315 115 aa20.85■□□□□ 0.93
SREBF1-221ENST00000583080 FKBP1BP68106 108 aa20.85■□□□□ 0.93
SREBF1-221ENST00000583080 NBPF9Q3BBW0 867 aa20.85■□□□□ 0.93
SREBF1-221ENST00000583080 PRAMEF18Q5VWM3 479 aa20.85■□□□□ 0.93
SREBF1-221ENST00000583080 PODNQ7Z5L7 613 aa20.85■□□□□ 0.93
SREBF1-221ENST00000583080 TSPYL6Q8N831 410 aa20.85■□□□□ 0.93
SREBF1-221ENST00000583080 DDX58O95786 925 aaKnown RBP20.84■□□□□ 0.93
SREBF1-221ENST00000583080 CTU1Q7Z7A3 348 aaKnown RBP20.84■□□□□ 0.93
SREBF1-221ENST00000583080 CDC5LQ99459 802 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms