RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 POLR2AP24928 1970 aaKnown RBP17.63■□□□□ 0.41
SS18-222ENST00000582792 RPS8P62241 208 aaKnown RBP17.63■□□□□ 0.41
SS18-222ENST00000582792 DOK7Q18PE1 504 aa17.63■□□□□ 0.41
SS18-222ENST00000582792 RGMBQ6NW40 437 aa17.63■□□□□ 0.41
SS18-222ENST00000582792 C2orf69Q8N8R5 385 aa17.63■□□□□ 0.41
SS18-222ENST00000582792 DCPSQ96C86 337 aaKnown RBP17.63■□□□□ 0.41
SS18-222ENST00000582792 GBA2Q9HCG7 927 aaPredicted RBP17.63■□□□□ 0.41
SS18-222ENST00000582792 FAM155AB1AL88 458 aaPredicted RBP17.62■□□□□ 0.41
SS18-222ENST00000582792 ADM5C9JUS6 153 aa17.62■□□□□ 0.41
SS18-222ENST00000582792 SLC34A2O95436 690 aa17.62■□□□□ 0.41
SS18-222ENST00000582792 DGKZQ13574 1117 aa17.62■□□□□ 0.41
SS18-222ENST00000582792 RBM26Q5T8P6 1007 aaKnown RBP17.62■□□□□ 0.41
SS18-222ENST00000582792 DUSP27Q5VZP5 1158 aa17.62■□□□□ 0.41
SS18-222ENST00000582792 CFAP44Q96MT7 982 aa17.62■□□□□ 0.41
SS18-222ENST00000582792 PODXL2Q9NZ53 605 aa17.62■□□□□ 0.41
SS18-222ENST00000582792 SCN9AQ15858 1988 aa17.61■□□□□ 0.41
SS18-222ENST00000582792 VIL1P09327 827 aaKnown RBP17.61■□□□□ 0.41
SS18-222ENST00000582792 WDR43Q15061 677 aaKnown RBP eCLIP17.61■□□□□ 0.41
SS18-222ENST00000582792 KIF4BQ2VIQ3 1234 aa17.61■□□□□ 0.41
SS18-222ENST00000582792 ZBTB38Q8NAP3 1195 aaPredicted RBP17.61■□□□□ 0.41
SS18-222ENST00000582792 CCDC102AQ96A19 550 aa17.61■□□□□ 0.41
SS18-222ENST00000582792 ZC3H12CQ9C0D7 883 aaKnown RBP17.61■□□□□ 0.41
SS18-222ENST00000582792 SAGE1Q9NXZ1 904 aa17.6■□□□□ 0.41
SS18-222ENST00000582792 ZNF609O15014 1411 aa17.59■□□□□ 0.41
SS18-222ENST00000582792 HSP90B1P14625 803 aaKnown RBP17.59■□□□□ 0.41
SS18-222ENST00000582792 KIF23Q02241 960 aaPredicted RBP17.59■□□□□ 0.41
SS18-222ENST00000582792 GOLGA2Q08379 1002 aa17.59■□□□□ 0.41
SS18-222ENST00000582792 RIC3Q7Z5B4 369 aa17.59■□□□□ 0.41
SS18-222ENST00000582792 SULF1Q8IWU6 871 aa17.59■□□□□ 0.41
SS18-222ENST00000582792 SEC31BQ9NQW1 1179 aa17.59■□□□□ 0.41
SS18-222ENST00000582792 MBIPQ9NS73 344 aa17.59■□□□□ 0.41
SS18-222ENST00000582792 GGA3Q9NZ52 723 aa17.59■□□□□ 0.41
SS18-222ENST00000582792 ADAMTS8Q9UP79 889 aa17.59■□□□□ 0.41
SS18-222ENST00000582792 UFL1O94874 794 aa17.58■□□□□ 0.4
SS18-222ENST00000582792 ZNF157P51786 506 aaPredicted RBP17.58■□□□□ 0.4
SS18-222ENST00000582792 GGA1Q9UJY5 639 aa17.58■□□□□ 0.4
SS18-222ENST00000582792 ASTN2O75129 1339 aaPredicted RBP17.57■□□□□ 0.4
SS18-222ENST00000582792 G3V3G9 751 aa17.57■□□□□ 0.4
SS18-222ENST00000582792 ZNF853P0CG23 659 aa17.57■□□□□ 0.4
SS18-222ENST00000582792 ZNF280AP59817 542 aaPredicted RBP17.57■□□□□ 0.4
SS18-222ENST00000582792 DCAF8Q5TAQ9 597 aa17.57■□□□□ 0.4
SS18-222ENST00000582792 PHAXQ9H814 394 aaKnown RBP17.57■□□□□ 0.4
SS18-222ENST00000582792 ANKIB1Q9P2G1 1089 aa17.57■□□□□ 0.4
SS18-222ENST00000582792 PSME4Q14997 1843 aa17.56■□□□□ 0.4
SS18-222ENST00000582792 PCCAP05165 728 aaPredicted RBP17.56■□□□□ 0.4
SS18-222ENST00000582792 SLC10A3P09131 477 aa17.56■□□□□ 0.4
SS18-222ENST00000582792 CCDC152Q4G0S7 254 aa17.56■□□□□ 0.4
SS18-222ENST00000582792 RSBN1LQ6PCB5 846 aaPredicted RBP17.56■□□□□ 0.4
SS18-222ENST00000582792 CCDC191Q8NCU4 936 aa17.56■□□□□ 0.4
SS18-222ENST00000582792 AGBL3Q8NEM8 1001 aa17.56■□□□□ 0.4
SS18-222ENST00000582792 CDCA5Q96FF9 252 aa17.56■□□□□ 0.4
SS18-222ENST00000582792 MYD88Q99836 296 aa17.56■□□□□ 0.4
SS18-222ENST00000582792 PDE8AO60658 829 aa17.55■□□□□ 0.4
SS18-222ENST00000582792 DDX10Q13206 875 aaKnown RBP17.55■□□□□ 0.4
SS18-222ENST00000582792 RNF186Q9NXI6 227 aa17.55■□□□□ 0.4
SS18-222ENST00000582792 AKAP11Q9UKA4 1901 aa17.55■□□□□ 0.4
SS18-222ENST00000582792 TRPA1O75762 1119 aa17.54■□□□□ 0.4
SS18-222ENST00000582792 SCARF1Q14162 830 aa17.54■□□□□ 0.4
SS18-222ENST00000582792 ANGEL2Q5VTE6 544 aaKnown RBP17.54■□□□□ 0.4
SS18-222ENST00000582792 IFT57Q9NWB7 429 aa17.54■□□□□ 0.4
SS18-222ENST00000582792 XDHP47989 1333 aa17.53■□□□□ 0.4
SS18-222ENST00000582792 CSRNP1Q96S65 589 aa17.53■□□□□ 0.4
SS18-222ENST00000582792 GMLQ99445 158 aa17.53■□□□□ 0.4
SS18-222ENST00000582792 CWC25Q9NXE8 425 aaPredicted RBP17.53■□□□□ 0.4
SS18-222ENST00000582792 PITPNM2Q9BZ72 1349 aa17.52■□□□□ 0.4
SS18-222ENST00000582792 ELL2O00472 640 aaPredicted RBP17.52■□□□□ 0.4
SS18-222ENST00000582792 GNAI1P63096 354 aa17.52■□□□□ 0.4
SS18-222ENST00000582792 FKBP1BP68106 108 aa17.52■□□□□ 0.4
SS18-222ENST00000582792 ANKRD18AQ8IVF6 992 aa17.52■□□□□ 0.4
SS18-222ENST00000582792 REM2Q8IYK8 340 aaPredicted RBP17.52■□□□□ 0.4
SS18-222ENST00000582792 JARID2Q92833 1246 aaPredicted RBP17.52■□□□□ 0.4
SS18-222ENST00000582792 CCDC85AQ96PX6 553 aaPredicted RBP17.52■□□□□ 0.4
SS18-222ENST00000582792 METTL22Q9BUU2 404 aaPredicted RBP17.52■□□□□ 0.4
SS18-222ENST00000582792 MYOZ2Q9NPC6 264 aa17.52■□□□□ 0.4
SS18-222ENST00000582792 PAPPA2Q9BXP8 1791 aa17.52■□□□□ 0.4
SS18-222ENST00000582792 USP17L8P0C7I0 530 aa17.51■□□□□ 0.39
SS18-222ENST00000582792 ATP2B4P23634 1241 aa17.51■□□□□ 0.39
SS18-222ENST00000582792 CALD1Q05682 793 aaKnown RBP17.51■□□□□ 0.39
SS18-222ENST00000582792 PODNQ7Z5L7 613 aa17.51■□□□□ 0.39
SS18-222ENST00000582792 RASAL3Q86YV0 1011 aa17.51■□□□□ 0.39
SS18-222ENST00000582792 USP17L3A6NCW0 530 aa17.5■□□□□ 0.39
SS18-222ENST00000582792 USP17L4A6NCW7 530 aa17.5■□□□□ 0.39
SS18-222ENST00000582792 DDX58O95786 925 aaKnown RBP17.5■□□□□ 0.39
SS18-222ENST00000582792 USP17L1Q7RTZ2 530 aa17.5■□□□□ 0.39
SS18-222ENST00000582792 C8orf58Q8NAV2 365 aa17.5■□□□□ 0.39
SS18-222ENST00000582792 APAF1O14727 1248 aa17.49■□□□□ 0.39
SS18-222ENST00000582792 CDC5LQ99459 802 aaKnown RBP17.49■□□□□ 0.39
SS18-222ENST00000582792 CHMP4AQ9BY43 222 aa17.49■□□□□ 0.39
SS18-222ENST00000582792 CTSWP56202 376 aa17.48■□□□□ 0.39
SS18-222ENST00000582792 CCDC30Q5VVM6 783 aa17.48■□□□□ 0.39
SS18-222ENST00000582792 CTU1Q7Z7A3 348 aaKnown RBP17.48■□□□□ 0.39
SS18-222ENST00000582792 MED23Q9ULK4 1368 aa17.48■□□□□ 0.39
SS18-222ENST00000582792 BSDC1Q9NW68 430 aaPredicted RBP17.47■□□□□ 0.39
SS18-222ENST00000582792 MAP3K2Q9Y2U5 619 aa17.47■□□□□ 0.39
SS18-222ENST00000582792 PDE4DIPQ5VU43 2346 aa17.47■□□□□ 0.39
SS18-222ENST00000582792 MYH3P11055 1940 aa17.47■□□□□ 0.39
SS18-222ENST00000582792 ZNF646O15015 1829 aaPredicted RBP17.47■□□□□ 0.39
SS18-222ENST00000582792 WTIPA6NIX2 430 aaPredicted RBP17.46■□□□□ 0.39
SS18-222ENST00000582792 IGKV5-2P06315 115 aa17.46■□□□□ 0.39
SS18-222ENST00000582792 SOX10P56693 466 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms