RNA–Protein interactions for RNA: ENST00000581898.5

CUEDC1-210, Transcript of CUE domain containing 1, humanhuman

TSL 5

Gene CUEDC1, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-210ENST00000581898 TRIM28Q13263 835 aaKnown RBP13.01□□□□□ -0.33
CUEDC1-210ENST00000581898 KIF4BQ2VIQ3 1234 aa13.01□□□□□ -0.33
CUEDC1-210ENST00000581898 TBC1D16Q8TBP0 767 aa13.01□□□□□ -0.33
CUEDC1-210ENST00000581898 CSRNP1Q96S65 589 aa13.01□□□□□ -0.33
CUEDC1-210ENST00000581898 CHPF2Q9P2E5 772 aa13.01□□□□□ -0.33
CUEDC1-210ENST00000581898 LAS1LQ9Y4W2 734 aaKnown RBP13.01□□□□□ -0.33
CUEDC1-210ENST00000581898 IRS4O14654 1257 aaPredicted RBP13□□□□□ -0.33
CUEDC1-210ENST00000581898 NEUROD2Q15784 382 aa13□□□□□ -0.33
CUEDC1-210ENST00000581898 HDGFL1Q5TGJ6 251 aa13□□□□□ -0.33
CUEDC1-210ENST00000581898 HYPKQ9NX55 129 aa13□□□□□ -0.33
CUEDC1-210ENST00000581898 ANKIB1Q9P2G1 1089 aa13□□□□□ -0.33
CUEDC1-210ENST00000581898 ANKRD36CQ5JPF3 1778 aa12.99□□□□□ -0.33
CUEDC1-210ENST00000581898 SLC10A3P09131 477 aa12.99□□□□□ -0.33
CUEDC1-210ENST00000581898 HOXB7P09629 217 aa12.99□□□□□ -0.33
CUEDC1-210ENST00000581898 FKBP1BP68106 108 aa12.99□□□□□ -0.33
CUEDC1-210ENST00000581898 KRT24Q2M2I5 525 aa12.99□□□□□ -0.33
CUEDC1-210ENST00000581898 RTL5Q5HYW3 569 aaPredicted RBP12.99□□□□□ -0.33
CUEDC1-210ENST00000581898 AGBL3Q8NEM8 1001 aa12.99□□□□□ -0.33
CUEDC1-210ENST00000581898 GGA3Q9NZ52 723 aa12.99□□□□□ -0.33
CUEDC1-210ENST00000581898 PODXL2Q9NZ53 605 aa12.99□□□□□ -0.33
CUEDC1-210ENST00000581898 RTL9Q8NET4 1388 aa12.98□□□□□ -0.33
CUEDC1-210ENST00000581898 SCARF1Q14162 830 aa12.98□□□□□ -0.33
CUEDC1-210ENST00000581898 RALBP1Q15311 655 aa12.98□□□□□ -0.33
CUEDC1-210ENST00000581898 CTU1Q7Z7A3 348 aaKnown RBP12.98□□□□□ -0.33
CUEDC1-210ENST00000581898 CDCA5Q96FF9 252 aa12.98□□□□□ -0.33
CUEDC1-210ENST00000581898 GGA1Q9UJY5 639 aa12.98□□□□□ -0.33
CUEDC1-210ENST00000581898 SOX10P56693 466 aa12.97□□□□□ -0.33
CUEDC1-210ENST00000581898 ZNF280AP59817 542 aaPredicted RBP12.97□□□□□ -0.33
CUEDC1-210ENST00000581898 ANGEL2Q5VTE6 544 aaKnown RBP12.97□□□□□ -0.33
CUEDC1-210ENST00000581898 RSBN1LQ6PCB5 846 aaPredicted RBP12.97□□□□□ -0.33
CUEDC1-210ENST00000581898 ZBTB38Q8NAP3 1195 aaPredicted RBP12.97□□□□□ -0.33
CUEDC1-210ENST00000581898 MYBBP1AQ9BQG0 1328 aaKnown RBP12.96□□□□□ -0.33
CUEDC1-210ENST00000581898 DUOX1Q9NRD9 1551 aa12.96□□□□□ -0.33
CUEDC1-210ENST00000581898 UFL1O94874 794 aa12.96□□□□□ -0.33
CUEDC1-210ENST00000581898 USP17L8P0C7I0 530 aa12.96□□□□□ -0.33
CUEDC1-210ENST00000581898 PKN2Q16513 984 aaKnown RBP12.96□□□□□ -0.33
CUEDC1-210ENST00000581898 RIC3Q7Z5B4 369 aa12.96□□□□□ -0.33
CUEDC1-210ENST00000581898 CCDC146Q8IYE0 955 aa12.96□□□□□ -0.33
CUEDC1-210ENST00000581898 SEC31BQ9NQW1 1179 aa12.96□□□□□ -0.33
CUEDC1-210ENST00000581898 ASTN2O75129 1339 aaPredicted RBP12.95□□□□□ -0.34
CUEDC1-210ENST00000581898 TNRC18O15417 2968 aaPredicted RBP12.95□□□□□ -0.34
CUEDC1-210ENST00000581898 LAMB2P55268 1798 aa12.95□□□□□ -0.34
CUEDC1-210ENST00000581898 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
CUEDC1-210ENST00000581898 CCDC152Q4G0S7 254 aa12.95□□□□□ -0.34
CUEDC1-210ENST00000581898 DUSP27Q5VZP5 1158 aa12.95□□□□□ -0.34
CUEDC1-210ENST00000581898 PODNQ7Z5L7 613 aa12.95□□□□□ -0.34
CUEDC1-210ENST00000581898 RUNDC1Q96C34 613 aa12.95□□□□□ -0.34
CUEDC1-210ENST00000581898 HDAC9Q9UKV0 1011 aa12.95□□□□□ -0.34
CUEDC1-210ENST00000581898 TRIM35Q9UPQ4 493 aa12.95□□□□□ -0.34
CUEDC1-210ENST00000581898 PITPNM2Q9BZ72 1349 aa12.94□□□□□ -0.34
CUEDC1-210ENST00000581898 PDE4DIPQ5VU43 2346 aa12.94□□□□□ -0.34
CUEDC1-210ENST00000581898 TAF1P21675 1872 aa12.94□□□□□ -0.34
CUEDC1-210ENST00000581898 USP17L3A6NCW0 530 aa12.94□□□□□ -0.34
CUEDC1-210ENST00000581898 USP17L4A6NCW7 530 aa12.94□□□□□ -0.34
CUEDC1-210ENST00000581898 USP17L1Q7RTZ2 530 aa12.94□□□□□ -0.34
CUEDC1-210ENST00000581898 RASAL3Q86YV0 1011 aa12.94□□□□□ -0.34
CUEDC1-210ENST00000581898 CCDC191Q8NCU4 936 aa12.94□□□□□ -0.34
CUEDC1-210ENST00000581898 MYOZ2Q9NPC6 264 aa12.94□□□□□ -0.34
CUEDC1-210ENST00000581898 POLR2AP24928 1970 aaKnown RBP12.93□□□□□ -0.34
CUEDC1-210ENST00000581898 PDE8AO60658 829 aa12.93□□□□□ -0.34
CUEDC1-210ENST00000581898 PCCAP05165 728 aaPredicted RBP12.93□□□□□ -0.34
CUEDC1-210ENST00000581898 ATP2B4P23634 1241 aa12.93□□□□□ -0.34
CUEDC1-210ENST00000581898 CCDC184Q52MB2 194 aa12.93□□□□□ -0.34
CUEDC1-210ENST00000581898 ANKRD18AQ8IVF6 992 aa12.93□□□□□ -0.34
CUEDC1-210ENST00000581898 GMLQ99445 158 aa12.93□□□□□ -0.34
CUEDC1-210ENST00000581898 CHMP4AQ9BY43 222 aa12.93□□□□□ -0.34
CUEDC1-210ENST00000581898 LRRC37AA6NMS7 1700 aa12.93□□□□□ -0.34
CUEDC1-210ENST00000581898 XDHP47989 1333 aa12.92□□□□□ -0.34
CUEDC1-210ENST00000581898 UBE2Q2LH0YL09 131 aa12.92□□□□□ -0.34
CUEDC1-210ENST00000581898 TBC1D8O95759 1140 aa12.92□□□□□ -0.34
CUEDC1-210ENST00000581898 WDR43Q15061 677 aaKnown RBP eCLIP12.92□□□□□ -0.34
CUEDC1-210ENST00000581898 PRPF38BQ5VTL8 546 aaKnown RBP12.92□□□□□ -0.34
CUEDC1-210ENST00000581898 OGFOD1Q8N543 542 aa12.92□□□□□ -0.34
CUEDC1-210ENST00000581898 MYD88Q99836 296 aa12.92□□□□□ -0.34
CUEDC1-210ENST00000581898 PRKRIP1Q9H875 184 aaPredicted RBP12.92□□□□□ -0.34
CUEDC1-210ENST00000581898 HPS5Q9UPZ3 1129 aa12.92□□□□□ -0.34
CUEDC1-210ENST00000581898 NF2P35240 595 aa12.91□□□□□ -0.34
CUEDC1-210ENST00000581898 TM4SF4P48230 202 aa12.91□□□□□ -0.34
CUEDC1-210ENST00000581898 MMP14P50281 582 aa12.91□□□□□ -0.34
CUEDC1-210ENST00000581898 TTLL12Q14166 644 aaPredicted RBP12.91□□□□□ -0.34
CUEDC1-210ENST00000581898 ZNF296Q8WUU4 475 aaPredicted RBP12.91□□□□□ -0.34
CUEDC1-210ENST00000581898 PHAXQ9H814 394 aaKnown RBP12.91□□□□□ -0.34
CUEDC1-210ENST00000581898 CWC25Q9NXE8 425 aaPredicted RBP12.91□□□□□ -0.34
CUEDC1-210ENST00000581898 ZNF609O15014 1411 aa12.9□□□□□ -0.34
CUEDC1-210ENST00000581898 DDX58O95786 925 aaKnown RBP12.9□□□□□ -0.34
CUEDC1-210ENST00000581898 NOM1Q5C9Z4 860 aaKnown RBP12.9□□□□□ -0.34
CUEDC1-210ENST00000581898 MOB2Q70IA6 237 aa12.9□□□□□ -0.34
CUEDC1-210ENST00000581898 CCDC85AQ96PX6 553 aaPredicted RBP12.9□□□□□ -0.34
CUEDC1-210ENST00000581898 CDC5LQ99459 802 aaKnown RBP12.9□□□□□ -0.34
CUEDC1-210ENST00000581898 MBIPQ9NS73 344 aa12.9□□□□□ -0.34
CUEDC1-210ENST00000581898 ADAMTS8Q9UP79 889 aa12.9□□□□□ -0.34
CUEDC1-210ENST00000581898 DDX60Q8IY21 1712 aaKnown RBP12.89□□□□□ -0.35
CUEDC1-210ENST00000581898 GPR25O00155 361 aa12.89□□□□□ -0.35
CUEDC1-210ENST00000581898 ELL2O00472 640 aaPredicted RBP12.89□□□□□ -0.35
CUEDC1-210ENST00000581898 CALD1Q05682 793 aaKnown RBP12.89□□□□□ -0.35
CUEDC1-210ENST00000581898 NBPF9Q3BBW0 867 aa12.89□□□□□ -0.35
CUEDC1-210ENST00000581898 PRAMEF18Q5VWM3 479 aa12.89□□□□□ -0.35
CUEDC1-210ENST00000581898 JARID2Q92833 1246 aaPredicted RBP12.89□□□□□ -0.35
CUEDC1-210ENST00000581898 METTL22Q9BUU2 404 aaPredicted RBP12.89□□□□□ -0.35
CUEDC1-210ENST00000581898 BSDC1Q9NW68 430 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms