RNA–Protein interactions for RNA: ENST00000581709.1

RTTN-208, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-208ENST00000581709 LTBP3Q9NS15 1303 aa11.1□□□□□ -0.63
RTTN-208ENST00000581709 KCNJ4P48050 445 aa11.1□□□□□ -0.63
RTTN-208ENST00000581709 PTPN12Q05209 780 aaKnown RBP11.1□□□□□ -0.63
RTTN-208ENST00000581709 CHRNDQ07001 517 aa11.1□□□□□ -0.63
RTTN-208ENST00000581709 AAMPQ13685 434 aa11.1□□□□□ -0.63
RTTN-208ENST00000581709 WASHC4Q2M389 1173 aa11.1□□□□□ -0.63
RTTN-208ENST00000581709 C9orf131Q5VYM1 1079 aa11.1□□□□□ -0.63
RTTN-208ENST00000581709 KLHDC4Q8TBB5 520 aa11.1□□□□□ -0.63
RTTN-208ENST00000581709 JDP2Q8WYK2 163 aa11.1□□□□□ -0.63
RTTN-208ENST00000581709 ZC3H12CQ9C0D7 883 aaKnown RBP11.1□□□□□ -0.63
RTTN-208ENST00000581709 COPRSQ9NQ92 184 aa11.1□□□□□ -0.63
RTTN-208ENST00000581709 ZNF277Q9NRM2 450 aaPredicted RBP11.1□□□□□ -0.63
RTTN-208ENST00000581709 RNF216Q9NWF9 866 aaPredicted RBP11.1□□□□□ -0.63
RTTN-208ENST00000581709 LEMD3Q9Y2U8 911 aa11.1□□□□□ -0.63
RTTN-208ENST00000581709 RIPOR2Q9Y4F9 1068 aa11.1□□□□□ -0.63
RTTN-208ENST00000581709 MROH5Q6ZUA9 1318 aa11.09□□□□□ -0.63
RTTN-208ENST00000581709 ANKRD31Q8N7Z5 1873 aa11.09□□□□□ -0.63
RTTN-208ENST00000581709 N4BP2Q86UW6 1770 aaPredicted RBP11.09□□□□□ -0.63
RTTN-208ENST00000581709 G3V3G9 751 aa11.09□□□□□ -0.63
RTTN-208ENST00000581709 EYA2O00167 538 aa11.09□□□□□ -0.63
RTTN-208ENST00000581709 HMMRO75330 724 aa11.09□□□□□ -0.63
RTTN-208ENST00000581709 CIAO1O76071 339 aa11.09□□□□□ -0.63
RTTN-208ENST00000581709 UFL1O94874 794 aa11.09□□□□□ -0.63
RTTN-208ENST00000581709 IARSP41252 1262 aaKnown RBP11.09□□□□□ -0.63
RTTN-208ENST00000581709 RFX5P48382 616 aaPredicted RBP11.09□□□□□ -0.63
RTTN-208ENST00000581709 RASSF7Q02833 373 aa11.09□□□□□ -0.63
RTTN-208ENST00000581709 G3BP1Q13283 466 aaKnown RBP eCLIP11.09□□□□□ -0.63
RTTN-208ENST00000581709 METTL24Q5JXM2 366 aa11.09□□□□□ -0.63
RTTN-208ENST00000581709 DCAF8Q5TAQ9 597 aa11.09□□□□□ -0.63
RTTN-208ENST00000581709 LARGE2Q8N3Y3 721 aa11.09□□□□□ -0.63
RTTN-208ENST00000581709 TBC1D16Q8TBP0 767 aa11.09□□□□□ -0.63
RTTN-208ENST00000581709 CRBNQ96SW2 442 aa11.09□□□□□ -0.63
RTTN-208ENST00000581709 PUS3Q9BZE2 481 aaKnown RBP11.09□□□□□ -0.63
RTTN-208ENST00000581709 SIL1Q9H173 461 aa11.09□□□□□ -0.63
RTTN-208ENST00000581709 RNF181Q9P0P0 153 aa11.09□□□□□ -0.63
RTTN-208ENST00000581709 CEP126Q9P2H0 1117 aa11.09□□□□□ -0.63
RTTN-208ENST00000581709 POLLQ9UGP5 575 aa11.09□□□□□ -0.63
RTTN-208ENST00000581709 GOLGB1Q14789 3259 aaKnown RBP11.09□□□□□ -0.63
RTTN-208ENST00000581709 PNMA6EA0A0J9YXQ4 647 aa11.08□□□□□ -0.64
RTTN-208ENST00000581709 PPIP5K2O43314 1243 aa11.08□□□□□ -0.64
RTTN-208ENST00000581709 TAF5LO75529 589 aa11.08□□□□□ -0.64
RTTN-208ENST00000581709 IL15P40933 162 aaPredicted RBP11.08□□□□□ -0.64
RTTN-208ENST00000581709 POLA2Q14181 598 aa11.08□□□□□ -0.64
RTTN-208ENST00000581709 LRRC24Q50LG9 513 aa11.08□□□□□ -0.64
RTTN-208ENST00000581709 CEP85Q6P2H3 762 aa11.08□□□□□ -0.64
RTTN-208ENST00000581709 HELBQ8NG08 1087 aaPredicted RBP11.08□□□□□ -0.64
RTTN-208ENST00000581709 SSH3Q8TE77 659 aa11.08□□□□□ -0.64
RTTN-208ENST00000581709 ZNF804BA4D1E1 1349 aa11.08□□□□□ -0.64
RTTN-208ENST00000581709 TNRC6CQ9HCJ0 1690 aaKnown RBP11.08□□□□□ -0.64
RTTN-208ENST00000581709 RIMBP2O15034 1052 aa11.07□□□□□ -0.64
RTTN-208ENST00000581709 SURF6O75683 361 aaKnown RBP11.07□□□□□ -0.64
RTTN-208ENST00000581709 PDE8BO95263 885 aa11.07□□□□□ -0.64
RTTN-208ENST00000581709 KIAA2012Q0VF49 1180 aa11.07□□□□□ -0.64
RTTN-208ENST00000581709 OS9Q13438 667 aaPredicted RBP11.07□□□□□ -0.64
RTTN-208ENST00000581709 DPY19L2Q6NUT2 758 aa11.07□□□□□ -0.64
RTTN-208ENST00000581709 SLC51AQ86UW1 340 aa11.07□□□□□ -0.64
RTTN-208ENST00000581709 PA2G4Q9UQ80 394 aaKnown RBP11.07□□□□□ -0.64
RTTN-208ENST00000581709 UBE4AQ14139 1066 aa11.06□□□□□ -0.64
RTTN-208ENST00000581709 AOC3Q16853 763 aa11.06□□□□□ -0.64
RTTN-208ENST00000581709 HSP90AB4PQ58FF6 505 aa11.06□□□□□ -0.64
RTTN-208ENST00000581709 ATG9AQ7Z3C6 839 aa11.06□□□□□ -0.64
RTTN-208ENST00000581709 NIM1KQ8IY84 436 aa11.06□□□□□ -0.64
RTTN-208ENST00000581709 DDX60Q8IY21 1712 aaKnown RBP11.06□□□□□ -0.64
RTTN-208ENST00000581709 KIAA1551Q9HCM1 1747 aa11.06□□□□□ -0.64
RTTN-208ENST00000581709 UTRNP46939 3433 aa11.05□□□□□ -0.64
RTTN-208ENST00000581709 SLX4Q8IY92 1834 aa11.05□□□□□ -0.64
RTTN-208ENST00000581709 YY1P25490 414 aa11.05□□□□□ -0.64
RTTN-208ENST00000581709 PRELPP51888 382 aa11.05□□□□□ -0.64
RTTN-208ENST00000581709 EIF6P56537 245 aaKnown RBP11.05□□□□□ -0.64
RTTN-208ENST00000581709 PUM3Q15397 648 aaKnown RBP11.05□□□□□ -0.64
RTTN-208ENST00000581709 ZNRF3Q9ULT6 936 aa11.05□□□□□ -0.64
RTTN-208ENST00000581709 AKAP2Q9Y2D5 859 aa11.05□□□□□ -0.64
RTTN-208ENST00000581709 NOP58Q9Y2X3 529 aaKnown RBP11.05□□□□□ -0.64
RTTN-208ENST00000581709 ZC3H4Q9UPT8 1303 aaKnown RBP11.05□□□□□ -0.64
RTTN-208ENST00000581709 COL11A2P13942 1736 aaPredicted RBP11.04□□□□□ -0.64
RTTN-208ENST00000581709 WTIPA6NIX2 430 aaPredicted RBP11.04□□□□□ -0.64
RTTN-208ENST00000581709 FZD9O00144 591 aa11.04□□□□□ -0.64
RTTN-208ENST00000581709 IFIT1P09914 478 aaKnown RBP11.04□□□□□ -0.64
RTTN-208ENST00000581709 DOK7Q18PE1 504 aa11.04□□□□□ -0.64
RTTN-208ENST00000581709 CAVIN4Q5BKX8 364 aa11.04□□□□□ -0.64
RTTN-208ENST00000581709 C15orf52Q6ZUT6 534 aaKnown RBP11.04□□□□□ -0.64
RTTN-208ENST00000581709 PODNQ7Z5L7 613 aa11.04□□□□□ -0.64
RTTN-208ENST00000581709 VPS37DQ86XT2 251 aa11.04□□□□□ -0.64
RTTN-208ENST00000581709 ERC1Q8IUD2 1116 aa11.04□□□□□ -0.64
RTTN-208ENST00000581709 SIRT2Q8IXJ6 389 aa11.04□□□□□ -0.64
RTTN-208ENST00000581709 EXOC6Q8TAG9 804 aa11.04□□□□□ -0.64
RTTN-208ENST00000581709 LPIN2Q92539 896 aa11.04□□□□□ -0.64
RTTN-208ENST00000581709 COA1Q9GZY4 146 aa11.04□□□□□ -0.64
RTTN-208ENST00000581709 SNED1Q8TER0 1413 aa11.03□□□□□ -0.64
RTTN-208ENST00000581709 SNAP23O00161 211 aa11.03□□□□□ -0.64
RTTN-208ENST00000581709 SLC5A1P13866 664 aa11.03□□□□□ -0.64
RTTN-208ENST00000581709 IRX6P78412 446 aaPredicted RBP11.03□□□□□ -0.64
RTTN-208ENST00000581709 TFCP2Q12800 502 aa11.03□□□□□ -0.64
RTTN-208ENST00000581709 TNIP1Q15025 636 aa11.03□□□□□ -0.64
RTTN-208ENST00000581709 ZNF804AQ7Z570 1209 aa11.03□□□□□ -0.64
RTTN-208ENST00000581709 VGLL2Q8N8G2 317 aa11.03□□□□□ -0.64
RTTN-208ENST00000581709 GPR101Q96P66 508 aaPredicted RBP11.03□□□□□ -0.64
RTTN-208ENST00000581709 PCDHB15Q9Y5E8 787 aa11.03□□□□□ -0.64
RTTN-208ENST00000581709 GLTPD2A6NH11 291 aa11.02□□□□□ -0.65
RTTN-208ENST00000581709 ECE2O60344 883 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms