RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 ALDH1L1O75891 902 aa24.73■■□□□ 1.55
SREBF1-220ENST00000581707 UFL1O94874 794 aa24.73■■□□□ 1.55
SREBF1-220ENST00000581707 EPS15P42566 896 aa24.73■■□□□ 1.55
SREBF1-220ENST00000581707 GPR101Q96P66 508 aaPredicted RBP24.73■■□□□ 1.55
SREBF1-220ENST00000581707 ZC3H12CQ9C0D7 883 aaKnown RBP24.73■■□□□ 1.55
SREBF1-220ENST00000581707 SRCIN1Q9C0H9 1055 aa24.73■■□□□ 1.55
SREBF1-220ENST00000581707 CLEC11AQ9Y240 323 aa24.73■■□□□ 1.55
SREBF1-220ENST00000581707 XDHP47989 1333 aa24.72■■□□□ 1.55
SREBF1-220ENST00000581707 GRM8O00222 908 aa24.72■■□□□ 1.55
SREBF1-220ENST00000581707 ITGA6P23229 1130 aa24.72■■□□□ 1.55
SREBF1-220ENST00000581707 HTRA3P83110 453 aa24.72■■□□□ 1.55
SREBF1-220ENST00000581707 DBNDD1Q9H9R9 158 aa24.72■■□□□ 1.55
SREBF1-220ENST00000581707 C9orf78Q9NZ63 289 aaPredicted RBP24.72■■□□□ 1.55
SREBF1-220ENST00000581707 SPEF2Q9C093 1822 aa24.72■■□□□ 1.55
SREBF1-220ENST00000581707 PTPRCP08575 1304 aa24.71■■□□□ 1.55
SREBF1-220ENST00000581707 IGHMBP2P38935 993 aaKnown RBP24.71■■□□□ 1.55
SREBF1-220ENST00000581707 DOK7Q18PE1 504 aa24.71■■□□□ 1.55
SREBF1-220ENST00000581707 FAM161AQ3B820 660 aa24.71■■□□□ 1.55
SREBF1-220ENST00000581707 DNAJC5GQ8N7S2 189 aa24.71■■□□□ 1.55
SREBF1-220ENST00000581707 MINPP1Q9UNW1 487 aa24.71■■□□□ 1.55
SREBF1-220ENST00000581707 GMPSP49915 693 aaPredicted RBP24.7■■□□□ 1.54
SREBF1-220ENST00000581707 FOXO4P98177 505 aa24.7■■□□□ 1.54
SREBF1-220ENST00000581707 ALDH1L2Q3SY69 923 aa24.7■■□□□ 1.54
SREBF1-220ENST00000581707 BCL2L13Q9BXK5 485 aa24.7■■□□□ 1.54
SREBF1-220ENST00000581707 GPRC5DQ9NZD1 345 aa24.7■■□□□ 1.54
SREBF1-220ENST00000581707 ECE2O60344 883 aa24.69■■□□□ 1.54
SREBF1-220ENST00000581707 ATP2B4P23634 1241 aa24.69■■□□□ 1.54
SREBF1-220ENST00000581707 ADAMTSL1Q8N6G6 1762 aa24.69■■□□□ 1.54
SREBF1-220ENST00000581707 G3V3G9 751 aa24.68■■□□□ 1.54
SREBF1-220ENST00000581707 CT47B1P0C2W7 299 aaPredicted RBP24.68■■□□□ 1.54
SREBF1-220ENST00000581707 DCAF8Q5TAQ9 597 aa24.68■■□□□ 1.54
SREBF1-220ENST00000581707 MPHOSPH8Q99549 860 aa24.68■■□□□ 1.54
SREBF1-220ENST00000581707 ANKRD18BA2A2Z9 1011 aa24.67■■□□□ 1.54
SREBF1-220ENST00000581707 USP50Q70EL3 339 aaPredicted RBP24.67■■□□□ 1.54
SREBF1-220ENST00000581707 SMC4Q9NTJ3 1288 aa24.67■■□□□ 1.54
SREBF1-220ENST00000581707 PSMD14O00487 310 aa24.66■■□□□ 1.54
SREBF1-220ENST00000581707 IFIT5Q13325 482 aaKnown RBP24.66■■□□□ 1.54
SREBF1-220ENST00000581707 LMBR1LQ6UX01 489 aa24.66■■□□□ 1.54
SREBF1-220ENST00000581707 KCNQ5Q9NR82 932 aa24.66■■□□□ 1.54
SREBF1-220ENST00000581707 ADARB2Q9NS39 739 aaKnown RBP24.66■■□□□ 1.54
SREBF1-220ENST00000581707 CHMP3Q9Y3E7 222 aa24.66■■□□□ 1.54
SREBF1-220ENST00000581707 ITGBL1O95965 494 aaPredicted RBP24.65■■□□□ 1.54
SREBF1-220ENST00000581707 EPHA10Q5JZY3 1008 aa24.65■■□□□ 1.54
SREBF1-220ENST00000581707 MAP1SQ66K74 1059 aaPredicted RBP24.65■■□□□ 1.54
SREBF1-220ENST00000581707 WTIPA6NIX2 430 aaPredicted RBP24.64■■□□□ 1.54
SREBF1-220ENST00000581707 CCT4P50991 539 aaKnown RBP24.64■■□□□ 1.54
SREBF1-220ENST00000581707 CNTROBQ8N137 903 aa24.64■■□□□ 1.54
SREBF1-220ENST00000581707 CNOT7Q9UIV1 285 aaKnown RBP24.64■■□□□ 1.54
SREBF1-220ENST00000581707 ZBTB12Q9Y330 459 aaPredicted RBP24.64■■□□□ 1.54
SREBF1-220ENST00000581707 PASKQ96RG2 1323 aa24.63■■□□□ 1.53
SREBF1-220ENST00000581707 ANKRD2Q9GZV1 360 aa24.63■■□□□ 1.53
SREBF1-220ENST00000581707 UTYO14607 1347 aa24.62■■□□□ 1.53
SREBF1-220ENST00000581707 NBPF7P0C2Y1 421 aaPredicted RBP24.62■■□□□ 1.53
SREBF1-220ENST00000581707 CCDC57Q2TAC2 916 aa24.62■■□□□ 1.53
SREBF1-220ENST00000581707 DPF2Q92785 391 aa24.62■■□□□ 1.53
SREBF1-220ENST00000581707 KLRG1Q96E93 195 aa24.62■■□□□ 1.53
SREBF1-220ENST00000581707 LEMD3Q9Y2U8 911 aa24.62■■□□□ 1.53
SREBF1-220ENST00000581707 SCN9AQ15858 1988 aa24.62■■□□□ 1.53
SREBF1-220ENST00000581707 H7C1D1 291 aa24.61■■□□□ 1.53
SREBF1-220ENST00000581707 SUCLG2Q96I99 432 aa24.61■■□□□ 1.53
SREBF1-220ENST00000581707 MED23Q9ULK4 1368 aa24.6■■□□□ 1.53
SREBF1-220ENST00000581707 VIL1P09327 827 aaKnown RBP24.6■■□□□ 1.53
SREBF1-220ENST00000581707 RPS12P25398 132 aaKnown RBP24.6■■□□□ 1.53
SREBF1-220ENST00000581707 CHRNDQ07001 517 aa24.6■■□□□ 1.53
SREBF1-220ENST00000581707 MICALL2Q8IY33 904 aa24.6■■□□□ 1.53
SREBF1-220ENST00000581707 KAZALD1Q96I82 304 aa24.6■■□□□ 1.53
SREBF1-220ENST00000581707 CREBZFQ9NS37 354 aa24.6■■□□□ 1.53
SREBF1-220ENST00000581707 SHTN1A0MZ66 631 aa24.59■■□□□ 1.53
SREBF1-220ENST00000581707 BRPF1P55201 1214 aaPredicted RBP24.59■■□□□ 1.53
SREBF1-220ENST00000581707 HNRNPUQ00839 825 aaKnown RBP eCLIP24.59■■□□□ 1.53
SREBF1-220ENST00000581707 TAF7LQ5H9L4 462 aa24.59■■□□□ 1.53
SREBF1-220ENST00000581707 PODNQ7Z5L7 613 aa24.59■■□□□ 1.53
SREBF1-220ENST00000581707 NOB1Q9ULX3 412 aaKnown RBP24.59■■□□□ 1.53
SREBF1-220ENST00000581707 ZNF804BA4D1E1 1349 aa24.59■■□□□ 1.53
SREBF1-220ENST00000581707 RARSP54136 660 aaKnown RBP24.58■■□□□ 1.53
SREBF1-220ENST00000581707 KCNJ4P48050 445 aa24.57■■□□□ 1.52
SREBF1-220ENST00000581707 LDHAL6AQ6ZMR3 332 aa24.57■■□□□ 1.52
SREBF1-220ENST00000581707 ZNF594Q96JF6 807 aaPredicted RBP24.57■■□□□ 1.52
SREBF1-220ENST00000581707 USP44Q9H0E7 712 aa24.57■■□□□ 1.52
SREBF1-220ENST00000581707 TMEM88BA6NKF7 163 aa24.56■■□□□ 1.52
SREBF1-220ENST00000581707 HIRAP54198 1017 aaPredicted RBP24.56■■□□□ 1.52
SREBF1-220ENST00000581707 TXNRD3Q86VQ6 643 aa24.56■■□□□ 1.52
SREBF1-220ENST00000581707 TRPM4Q8TD43 1214 aa24.56■■□□□ 1.52
SREBF1-220ENST00000581707 BICC1Q9H694 974 aaKnown RBP24.56■■□□□ 1.52
SREBF1-220ENST00000581707 HELBQ8NG08 1087 aaPredicted RBP24.55■■□□□ 1.52
SREBF1-220ENST00000581707 ZC3H15Q8WU90 426 aaKnown RBP24.55■■□□□ 1.52
SREBF1-220ENST00000581707 COA1Q9GZY4 146 aa24.55■■□□□ 1.52
SREBF1-220ENST00000581707 CNNM1Q9NRU3 951 aa24.55■■□□□ 1.52
SREBF1-220ENST00000581707 PGAP2Q9UHJ9 254 aa24.55■■□□□ 1.52
SREBF1-220ENST00000581707 PSME4Q14997 1843 aa24.55■■□□□ 1.52
SREBF1-220ENST00000581707 USP17L3A6NCW0 530 aa24.54■■□□□ 1.52
SREBF1-220ENST00000581707 USP17L4A6NCW7 530 aa24.54■■□□□ 1.52
SREBF1-220ENST00000581707 TAF5LO75529 589 aa24.54■■□□□ 1.52
SREBF1-220ENST00000581707 RSBN1LQ6PCB5 846 aaPredicted RBP24.54■■□□□ 1.52
SREBF1-220ENST00000581707 USP17L1Q7RTZ2 530 aa24.54■■□□□ 1.52
SREBF1-220ENST00000581707 SAMD7Q7Z3H4 446 aa24.54■■□□□ 1.52
SREBF1-220ENST00000581707 API5Q9BZZ5 524 aaKnown RBP24.54■■□□□ 1.52
SREBF1-220ENST00000581707 KLRK1P26718 216 aa24.53■■□□□ 1.52
SREBF1-220ENST00000581707 RABL6Q3YEC7 729 aaPredicted RBP24.53■■□□□ 1.52
SREBF1-220ENST00000581707 TBC1D10BQ4KMP7 808 aaPredicted RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms