RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 NECTIN2Q92692 538 aa18.34■□□□□ 0.53
CSNK1D-219ENST00000581660 EYA3Q99504 573 aa18.34■□□□□ 0.53
CSNK1D-219ENST00000581660 CEP290O15078 2479 aa18.34■□□□□ 0.53
CSNK1D-219ENST00000581660 BRCA2P51587 3418 aa18.34■□□□□ 0.53
CSNK1D-219ENST00000581660 CENPFP49454 3210 aa18.34■□□□□ 0.53
CSNK1D-219ENST00000581660 RIMBP2O15034 1052 aa18.33■□□□□ 0.52
CSNK1D-219ENST00000581660 SCARF1Q14162 830 aa18.33■□□□□ 0.52
CSNK1D-219ENST00000581660 INTS3Q68E01 1043 aaKnown RBP18.33■□□□□ 0.52
CSNK1D-219ENST00000581660 DLG5Q8TDM6 1919 aa18.33■□□□□ 0.52
CSNK1D-219ENST00000581660 TRIOBPQ9H2D6 2365 aa18.32■□□□□ 0.52
CSNK1D-219ENST00000581660 C6orf229H3BNL8 230 aa18.32■□□□□ 0.52
CSNK1D-219ENST00000581660 GPSM2P81274 684 aa18.32■□□□□ 0.52
CSNK1D-219ENST00000581660 DOK7Q18PE1 504 aa18.32■□□□□ 0.52
CSNK1D-219ENST00000581660 THUMPD2Q9BTF0 503 aaKnown RBP18.32■□□□□ 0.52
CSNK1D-219ENST00000581660 TRMT112Q9UI30 125 aaKnown RBP18.32■□□□□ 0.52
CSNK1D-219ENST00000581660 SZT2Q5T011 3432 aa18.31■□□□□ 0.52
CSNK1D-219ENST00000581660 PROSER3Q2NL68 480 aa18.31■□□□□ 0.52
CSNK1D-219ENST00000581660 MOB2Q70IA6 237 aa18.31■□□□□ 0.52
CSNK1D-219ENST00000581660 AGBL3Q8NEM8 1001 aa18.31■□□□□ 0.52
CSNK1D-219ENST00000581660 TBC1D16Q8TBP0 767 aa18.31■□□□□ 0.52
CSNK1D-219ENST00000581660 CELF1Q92879 486 aaKnown RBP18.31■□□□□ 0.52
CSNK1D-219ENST00000581660 PCGF6Q9BYE7 350 aa18.31■□□□□ 0.52
CSNK1D-219ENST00000581660 COL4A1P02462 1669 aa18.31■□□□□ 0.52
CSNK1D-219ENST00000581660 POTEFA5A3E0 1075 aa18.3■□□□□ 0.52
CSNK1D-219ENST00000581660 UBE2Q2LH0YL09 131 aa18.3■□□□□ 0.52
CSNK1D-219ENST00000581660 SREBF2Q12772 1141 aa18.3■□□□□ 0.52
CSNK1D-219ENST00000581660 TCIRG1Q13488 830 aa18.3■□□□□ 0.52
CSNK1D-219ENST00000581660 SF3B3Q15393 1217 aaKnown RBP18.3■□□□□ 0.52
CSNK1D-219ENST00000581660 PSME4Q14997 1843 aa18.3■□□□□ 0.52
CSNK1D-219ENST00000581660 CNGB1Q14028 1251 aaPredicted RBP18.29■□□□□ 0.52
CSNK1D-219ENST00000581660 RSBN1LQ6PCB5 846 aaPredicted RBP18.29■□□□□ 0.52
CSNK1D-219ENST00000581660 GMLQ99445 158 aa18.29■□□□□ 0.52
CSNK1D-219ENST00000581660 R3HDMLQ9H3Y0 253 aa18.29■□□□□ 0.52
CSNK1D-219ENST00000581660 PODXL2Q9NZ53 605 aa18.28■□□□□ 0.52
CSNK1D-219ENST00000581660 ZC3H12CQ9C0D7 883 aaKnown RBP18.27■□□□□ 0.52
CSNK1D-219ENST00000581660 MYOZ2Q9NPC6 264 aa18.27■□□□□ 0.52
CSNK1D-219ENST00000581660 ALDH1A1P00352 501 aa18.26■□□□□ 0.51
CSNK1D-219ENST00000581660 ANXA1P04083 346 aa18.26■□□□□ 0.51
CSNK1D-219ENST00000581660 USP17L8P0C7I0 530 aa18.26■□□□□ 0.51
CSNK1D-219ENST00000581660 COPS6Q7L5N1 327 aa18.26■□□□□ 0.51
CSNK1D-219ENST00000581660 OTOP1Q7RTM1 612 aa18.26■□□□□ 0.51
CSNK1D-219ENST00000581660 CUL9Q8IWT3 2517 aa18.26■□□□□ 0.51
CSNK1D-219ENST00000581660 PPP2R1AP30153 589 aa18.25■□□□□ 0.51
CSNK1D-219ENST00000581660 XAGE3Q8WTP9 111 aa18.25■□□□□ 0.51
CSNK1D-219ENST00000581660 ARMC5Q96C12 935 aa18.25■□□□□ 0.51
CSNK1D-219ENST00000581660 TRIM17Q9Y577 477 aa18.25■□□□□ 0.51
CSNK1D-219ENST00000581660 EIF2S2P20042 333 aaKnown RBP18.24■□□□□ 0.51
CSNK1D-219ENST00000581660 COLQQ9Y215 455 aaPredicted RBP18.24■□□□□ 0.51
CSNK1D-219ENST00000581660 RPS8P62241 208 aaKnown RBP18.23■□□□□ 0.51
CSNK1D-219ENST00000581660 NFE2L2Q16236 605 aa18.23■□□□□ 0.51
CSNK1D-219ENST00000581660 RANBP2P49792 3224 aaKnown RBP18.23■□□□□ 0.51
CSNK1D-219ENST00000581660 NEFMP07197 916 aa18.22■□□□□ 0.51
CSNK1D-219ENST00000581660 MKRN3Q13064 507 aaKnown RBP18.22■□□□□ 0.51
CSNK1D-219ENST00000581660 TTLL12Q14166 644 aaPredicted RBP18.22■□□□□ 0.51
CSNK1D-219ENST00000581660 PRAMEF18Q5VWM3 479 aa18.22■□□□□ 0.51
CSNK1D-219ENST00000581660 PLEKHF1Q96S99 279 aa18.22■□□□□ 0.51
CSNK1D-219ENST00000581660 TSPYL4Q9UJ04 414 aa18.22■□□□□ 0.51
CSNK1D-219ENST00000581660 SCAF8Q9UPN6 1271 aaKnown RBP18.22■□□□□ 0.51
CSNK1D-219ENST00000581660 LAMB1P07942 1786 aa18.22■□□□□ 0.51
CSNK1D-219ENST00000581660 UFL1O94874 794 aa18.21■□□□□ 0.51
CSNK1D-219ENST00000581660 NF2P35240 595 aa18.21■□□□□ 0.51
CSNK1D-219ENST00000581660 PTPN12Q05209 780 aaKnown RBP18.21■□□□□ 0.51
CSNK1D-219ENST00000581660 AIMP1Q12904 312 aaKnown RBP18.21■□□□□ 0.51
CSNK1D-219ENST00000581660 LDLRAD1Q5T700 205 aa18.21■□□□□ 0.51
CSNK1D-219ENST00000581660 SPRYD7Q5W111 196 aa18.21■□□□□ 0.51
CSNK1D-219ENST00000581660 FAM89AQ96GI7 184 aa18.21■□□□□ 0.51
CSNK1D-219ENST00000581660 ISCA1Q9BUE6 129 aa18.21■□□□□ 0.51
CSNK1D-219ENST00000581660 BABAM1Q9NWV8 329 aa18.21■□□□□ 0.51
CSNK1D-219ENST00000581660 GGA1Q9UJY5 639 aa18.21■□□□□ 0.51
CSNK1D-219ENST00000581660 PTPN22Q9Y2R2 807 aa18.21■□□□□ 0.51
CSNK1D-219ENST00000581660 G3V3G9 751 aa18.2■□□□□ 0.5
CSNK1D-219ENST00000581660 EN2P19622 333 aaPredicted RBP18.2■□□□□ 0.5
CSNK1D-219ENST00000581660 INHBEP58166 350 aa18.2■□□□□ 0.5
CSNK1D-219ENST00000581660 NBPF9Q3BBW0 867 aa18.2■□□□□ 0.5
CSNK1D-219ENST00000581660 DCAF8Q5TAQ9 597 aa18.2■□□□□ 0.5
CSNK1D-219ENST00000581660 USP17L3A6NCW0 530 aa18.19■□□□□ 0.5
CSNK1D-219ENST00000581660 USP17L4A6NCW7 530 aa18.19■□□□□ 0.5
CSNK1D-219ENST00000581660 USP17L1Q7RTZ2 530 aa18.19■□□□□ 0.5
CSNK1D-219ENST00000581660 ARMC9Q7Z3E5 817 aa18.19■□□□□ 0.5
CSNK1D-219ENST00000581660 PODNQ7Z5L7 613 aa18.19■□□□□ 0.5
CSNK1D-219ENST00000581660 IFNL1Q8IU54 200 aa18.19■□□□□ 0.5
CSNK1D-219ENST00000581660 ERO1AQ96HE7 468 aa18.19■□□□□ 0.5
CSNK1D-219ENST00000581660 MANSC4A6NHS7 340 aaPredicted RBP18.18■□□□□ 0.5
CSNK1D-219ENST00000581660 PLBD2Q8NHP8 589 aa18.18■□□□□ 0.5
CSNK1D-219ENST00000581660 ANKIB1Q9P2G1 1089 aa18.18■□□□□ 0.5
CSNK1D-219ENST00000581660 ZNF646O15015 1829 aaPredicted RBP18.17■□□□□ 0.5
CSNK1D-219ENST00000581660 WNT10BO00744 389 aa18.17■□□□□ 0.5
CSNK1D-219ENST00000581660 A0A0C4DFX4 3053 aa18.17■□□□□ 0.5
CSNK1D-219ENST00000581660 IRS4O14654 1257 aaPredicted RBP18.16■□□□□ 0.5
CSNK1D-219ENST00000581660 ZBTB48P10074 688 aaPredicted RBP18.16■□□□□ 0.5
CSNK1D-219ENST00000581660 TRIM28Q13263 835 aaKnown RBP18.16■□□□□ 0.5
CSNK1D-219ENST00000581660 ZNF428Q96B54 188 aa18.16■□□□□ 0.5
CSNK1D-219ENST00000581660 OTUD5Q96G74 571 aa18.16■□□□□ 0.5
CSNK1D-219ENST00000581660 IGF2BP3O00425 579 aaKnown RBP eCLIP18.15■□□□□ 0.5
CSNK1D-219ENST00000581660 MMP14P50281 582 aa18.15■□□□□ 0.5
CSNK1D-219ENST00000581660 ZNF333Q96JL9 665 aa18.15■□□□□ 0.5
CSNK1D-219ENST00000581660 COL1A1P02452 1464 aaPredicted RBP18.14■□□□□ 0.5
CSNK1D-219ENST00000581660 MAP3K11Q16584 847 aa18.14■□□□□ 0.49
CSNK1D-219ENST00000581660 DACT2Q5SW24 774 aa18.14■□□□□ 0.49
CSNK1D-219ENST00000581660 APOBEC3FQ8IUX4 373 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms