RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 CSF1RP07333 972 aa34.02■■■■□ 3.04
LINC00271-207ENST00000580741 ITGA6P23229 1130 aa34.02■■■■□ 3.04
LINC00271-207ENST00000580741 EYA3Q99504 573 aa34.02■■■■□ 3.04
LINC00271-207ENST00000580741 LMOD1P29536 600 aaPredicted RBP34.01■■■■□ 3.03
LINC00271-207ENST00000580741 DOK7Q18PE1 504 aa34.01■■■■□ 3.03
LINC00271-207ENST00000580741 SMC4Q9NTJ3 1288 aa34.01■■■■□ 3.03
LINC00271-207ENST00000580741 SPEF2Q9C093 1822 aa34■■■■□ 3.03
LINC00271-207ENST00000580741 ALDH1L1O75891 902 aa34■■■■□ 3.03
LINC00271-207ENST00000580741 EPS15P42566 896 aa34■■■■□ 3.03
LINC00271-207ENST00000580741 CIAPIN1Q6FI81 312 aa34■■■■□ 3.03
LINC00271-207ENST00000580741 LDHDQ86WU2 507 aa34■■■■□ 3.03
LINC00271-207ENST00000580741 BSDC1Q9NW68 430 aaPredicted RBP34■■■■□ 3.03
LINC00271-207ENST00000580741 C9orf78Q9NZ63 289 aaPredicted RBP34■■■■□ 3.03
LINC00271-207ENST00000580741 FOXO4P98177 505 aa33.99■■■■□ 3.03
LINC00271-207ENST00000580741 ALDH1L2Q3SY69 923 aa33.99■■■■□ 3.03
LINC00271-207ENST00000580741 EPHA10Q5JZY3 1008 aa33.99■■■■□ 3.03
LINC00271-207ENST00000580741 PTPRCP08575 1304 aa33.99■■■■□ 3.03
LINC00271-207ENST00000580741 XDHP47989 1333 aa33.99■■■■□ 3.03
LINC00271-207ENST00000580741 IGHMBP2P38935 993 aaKnown RBP33.98■■■■□ 3.03
LINC00271-207ENST00000580741 MINPP1Q9UNW1 487 aa33.98■■■■□ 3.03
LINC00271-207ENST00000580741 CLEC11AQ9Y240 323 aa33.98■■■■□ 3.03
LINC00271-207ENST00000580741 CHMP3Q9Y3E7 222 aa33.98■■■■□ 3.03
LINC00271-207ENST00000580741 WTIPA6NIX2 430 aaPredicted RBP33.97■■■■□ 3.03
LINC00271-207ENST00000580741 ECE2O60344 883 aa33.97■■■■□ 3.03
LINC00271-207ENST00000580741 GMPSP49915 693 aaPredicted RBP33.97■■■■□ 3.03
LINC00271-207ENST00000580741 ZC3H12CQ9C0D7 883 aaKnown RBP33.97■■■■□ 3.03
LINC00271-207ENST00000580741 PNMA8AQ86V59 439 aaPredicted RBP33.96■■■■□ 3.03
LINC00271-207ENST00000580741 TNIP1Q15025 636 aa33.95■■■■□ 3.03
LINC00271-207ENST00000580741 KCNQ5Q9NR82 932 aa33.95■■■■□ 3.03
LINC00271-207ENST00000580741 ATP2B4P23634 1241 aa33.94■■■■□ 3.02
LINC00271-207ENST00000580741 HNRNPUQ00839 825 aaKnown RBP eCLIP33.94■■■■□ 3.02
LINC00271-207ENST00000580741 LMBR1LQ6UX01 489 aa33.94■■■■□ 3.02
LINC00271-207ENST00000580741 GPRC5DQ9NZD1 345 aa33.94■■■■□ 3.02
LINC00271-207ENST00000580741 ANKRD18BA2A2Z9 1011 aa33.93■■■■□ 3.02
LINC00271-207ENST00000580741 CT47B1P0C2W7 299 aaPredicted RBP33.93■■■■□ 3.02
LINC00271-207ENST00000580741 ADAMTSL1Q8N6G6 1762 aa33.93■■■■□ 3.02
LINC00271-207ENST00000580741 PSMD14O00487 310 aa33.92■■■■□ 3.02
LINC00271-207ENST00000580741 NBPF7P0C2Y1 421 aaPredicted RBP33.92■■■■□ 3.02
LINC00271-207ENST00000580741 SUCLG2Q96I99 432 aa33.92■■■■□ 3.02
LINC00271-207ENST00000580741 MPHOSPH8Q99549 860 aa33.92■■■■□ 3.02
LINC00271-207ENST00000580741 IFIT5Q13325 482 aaKnown RBP33.91■■■■□ 3.02
LINC00271-207ENST00000580741 ZBTB12Q9Y330 459 aaPredicted RBP33.91■■■■□ 3.02
LINC00271-207ENST00000580741 G3V3G9 751 aa33.9■■■■□ 3.02
LINC00271-207ENST00000580741 DCAF8Q5TAQ9 597 aa33.9■■■■□ 3.02
LINC00271-207ENST00000580741 MAP1SQ66K74 1059 aaPredicted RBP33.9■■■■□ 3.02
LINC00271-207ENST00000580741 SHTN1A0MZ66 631 aa33.89■■■■□ 3.02
LINC00271-207ENST00000580741 CCT4P50991 539 aaKnown RBP33.89■■■■□ 3.02
LINC00271-207ENST00000580741 DNAJC5GQ8N7S2 189 aa33.89■■■■□ 3.02
LINC00271-207ENST00000580741 KAZALD1Q96I82 304 aa33.88■■■■□ 3.01
LINC00271-207ENST00000580741 ADARB2Q9NS39 739 aaKnown RBP33.88■■■■□ 3.01
LINC00271-207ENST00000580741 NOB1Q9ULX3 412 aaKnown RBP33.88■■■■□ 3.01
LINC00271-207ENST00000580741 ZNF594Q96JF6 807 aaPredicted RBP33.87■■■■□ 3.01
LINC00271-207ENST00000580741 UTYO14607 1347 aa33.86■■■■□ 3.01
LINC00271-207ENST00000580741 RARSP54136 660 aaKnown RBP33.86■■■■□ 3.01
LINC00271-207ENST00000580741 USP50Q70EL3 339 aaPredicted RBP33.86■■■■□ 3.01
LINC00271-207ENST00000580741 SCN9AQ15858 1988 aa33.85■■■■□ 3.01
LINC00271-207ENST00000580741 ITGBL1O95965 494 aaPredicted RBP33.85■■■■□ 3.01
LINC00271-207ENST00000580741 CHRNDQ07001 517 aa33.85■■■■□ 3.01
LINC00271-207ENST00000580741 CCDC57Q2TAC2 916 aa33.85■■■■□ 3.01
LINC00271-207ENST00000580741 CNTROBQ8N137 903 aa33.85■■■■□ 3.01
LINC00271-207ENST00000580741 CNOT7Q9UIV1 285 aaKnown RBP33.85■■■■□ 3.01
LINC00271-207ENST00000580741 MED23Q9ULK4 1368 aa33.85■■■■□ 3.01
LINC00271-207ENST00000580741 PASKQ96RG2 1323 aa33.84■■■■□ 3.01
LINC00271-207ENST00000580741 ANKRD2Q9GZV1 360 aa33.84■■■■□ 3.01
LINC00271-207ENST00000580741 TAF7LQ5H9L4 462 aa33.83■■■■□ 3.01
LINC00271-207ENST00000580741 MICALL2Q8IY33 904 aa33.83■■■■□ 3.01
LINC00271-207ENST00000580741 TRPM4Q8TD43 1214 aa33.83■■■■□ 3.01
LINC00271-207ENST00000580741 LEMD3Q9Y2U8 911 aa33.83■■■■□ 3.01
LINC00271-207ENST00000580741 KLRK1P26718 216 aa33.82■■■■□ 3
LINC00271-207ENST00000580741 TXNRD3Q86VQ6 643 aa33.82■■■■□ 3
LINC00271-207ENST00000580741 HELBQ8NG08 1087 aaPredicted RBP33.82■■■■□ 3
LINC00271-207ENST00000580741 BICC1Q9H694 974 aaKnown RBP33.82■■■■□ 3
LINC00271-207ENST00000580741 ZNF804BA4D1E1 1349 aa33.81■■■■□ 3
LINC00271-207ENST00000580741 SNAP23O00161 211 aa33.81■■■■□ 3
LINC00271-207ENST00000580741 USP44Q9H0E7 712 aa33.81■■■■□ 3
LINC00271-207ENST00000580741 TAF5LO75529 589 aa33.8■■■■□ 3
LINC00271-207ENST00000580741 BRPF1P55201 1214 aaPredicted RBP33.8■■■■□ 3
LINC00271-207ENST00000580741 DPF2Q92785 391 aa33.8■■■■□ 3
LINC00271-207ENST00000580741 H7C1D1 291 aa33.79■■■■□ 3
LINC00271-207ENST00000580741 VIL1P09327 827 aaKnown RBP33.79■■■■□ 3
LINC00271-207ENST00000580741 KCNJ4P48050 445 aa33.79■■■■□ 3
LINC00271-207ENST00000580741 HIRAP54198 1017 aaPredicted RBP33.79■■■■□ 3
LINC00271-207ENST00000580741 LDHAL6AQ6ZMR3 332 aa33.79■■■■□ 3
LINC00271-207ENST00000580741 KLRG1Q96E93 195 aa33.79■■■■□ 3
LINC00271-207ENST00000580741 ANKRD44Q8N8A2 993 aa33.78■■■■□ 3
LINC00271-207ENST00000580741 API5Q9BZZ5 524 aaKnown RBP33.78■■■■□ 3
LINC00271-207ENST00000580741 CNNM1Q9NRU3 951 aa33.78■■■■□ 3
LINC00271-207ENST00000580741 RPS12P25398 132 aaKnown RBP33.77■■■■□ 3
LINC00271-207ENST00000580741 FMR1Q06787 632 aaKnown RBP eCLIP33.77■■■■□ 3
LINC00271-207ENST00000580741 RABL6Q3YEC7 729 aaPredicted RBP33.77■■■■□ 3
LINC00271-207ENST00000580741 SAMD7Q7Z3H4 446 aa33.77■■■■□ 3
LINC00271-207ENST00000580741 PODNQ7Z5L7 613 aa33.77■■■■□ 3
LINC00271-207ENST00000580741 CREBZFQ9NS37 354 aa33.76■■■□□ 2.99
LINC00271-207ENST00000580741 PLIN1O60240 522 aa33.75■■■□□ 2.99
LINC00271-207ENST00000580741 TBC1D10BQ4KMP7 808 aaPredicted RBP33.75■■■□□ 2.99
LINC00271-207ENST00000580741 RSBN1LQ6PCB5 846 aaPredicted RBP33.75■■■□□ 2.99
LINC00271-207ENST00000580741 USP17L3A6NCW0 530 aa33.74■■■□□ 2.99
LINC00271-207ENST00000580741 USP17L4A6NCW7 530 aa33.74■■■□□ 2.99
LINC00271-207ENST00000580741 EGFRP00533 1210 aa33.74■■■□□ 2.99
LINC00271-207ENST00000580741 USP17L1Q7RTZ2 530 aa33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms