RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 SLC10A3P09131 477 aa25.03■■□□□ 1.6
NDEL1-209ENST00000580738 TMPOP42166 694 aaKnown RBP25.03■■□□□ 1.6
NDEL1-209ENST00000580738 RTL5Q5HYW3 569 aaPredicted RBP25.03■■□□□ 1.6
NDEL1-209ENST00000580738 PLBD2Q8NHP8 589 aa25.03■■□□□ 1.6
NDEL1-209ENST00000580738 TBC1D16Q8TBP0 767 aa25.03■■□□□ 1.6
NDEL1-209ENST00000580738 ISCA1Q9BUE6 129 aa25.03■■□□□ 1.6
NDEL1-209ENST00000580738 DDX60Q8IY21 1712 aaKnown RBP25.03■■□□□ 1.6
NDEL1-209ENST00000580738 SULF1Q8IWU6 871 aa25.02■■□□□ 1.6
NDEL1-209ENST00000580738 EYA3Q99504 573 aa25.02■■□□□ 1.6
NDEL1-209ENST00000580738 VIL1P09327 827 aaKnown RBP25.01■■□□□ 1.59
NDEL1-209ENST00000580738 ANKRD13DQ6ZTN6 518 aa25.01■■□□□ 1.59
NDEL1-209ENST00000580738 CDCA5Q96FF9 252 aa25.01■■□□□ 1.59
NDEL1-209ENST00000580738 CHL1O00533 1208 aa24.99■■□□□ 1.59
NDEL1-209ENST00000580738 RPS8P62241 208 aaKnown RBP24.99■■□□□ 1.59
NDEL1-209ENST00000580738 LMOD3Q0VAK6 560 aa24.99■■□□□ 1.59
NDEL1-209ENST00000580738 HDGFL1Q5TGJ6 251 aa24.98■■□□□ 1.59
NDEL1-209ENST00000580738 CTU1Q7Z7A3 348 aaKnown RBP24.98■■□□□ 1.59
NDEL1-209ENST00000580738 ZC3H12CQ9C0D7 883 aaKnown RBP24.98■■□□□ 1.59
NDEL1-209ENST00000580738 LAS1LQ9Y4W2 734 aaKnown RBP24.98■■□□□ 1.59
NDEL1-209ENST00000580738 IRS4O14654 1257 aaPredicted RBP24.97■■□□□ 1.59
NDEL1-209ENST00000580738 NEUROD2Q15784 382 aa24.97■■□□□ 1.59
NDEL1-209ENST00000580738 ANGEL2Q5VTE6 544 aaKnown RBP24.97■■□□□ 1.59
NDEL1-209ENST00000580738 RASAL3Q86YV0 1011 aa24.97■■□□□ 1.59
NDEL1-209ENST00000580738 SCN9AQ15858 1988 aa24.96■■□□□ 1.59
NDEL1-209ENST00000580738 SCARF1Q14162 830 aa24.96■■□□□ 1.59
NDEL1-209ENST00000580738 SEC31BQ9NQW1 1179 aa24.96■■□□□ 1.59
NDEL1-209ENST00000580738 PODXL2Q9NZ53 605 aa24.96■■□□□ 1.59
NDEL1-209ENST00000580738 UFL1O94874 794 aa24.95■■□□□ 1.58
NDEL1-209ENST00000580738 ZNF280AP59817 542 aaPredicted RBP24.95■■□□□ 1.58
NDEL1-209ENST00000580738 G3V3G9 751 aa24.94■■□□□ 1.58
NDEL1-209ENST00000580738 DCAF8Q5TAQ9 597 aa24.94■■□□□ 1.58
NDEL1-209ENST00000580738 ANKIB1Q9P2G1 1089 aa24.94■■□□□ 1.58
NDEL1-209ENST00000580738 DBF4Q9UBU7 674 aaPredicted RBP24.94■■□□□ 1.58
NDEL1-209ENST00000580738 AKAP11Q9UKA4 1901 aa24.93■■□□□ 1.58
NDEL1-209ENST00000580738 TRIM28Q13263 835 aaKnown RBP24.93■■□□□ 1.58
NDEL1-209ENST00000580738 RSBN1LQ6PCB5 846 aaPredicted RBP24.93■■□□□ 1.58
NDEL1-209ENST00000580738 MOB2Q70IA6 237 aa24.93■■□□□ 1.58
NDEL1-209ENST00000580738 CCDC146Q8IYE0 955 aa24.93■■□□□ 1.58
NDEL1-209ENST00000580738 SCAF8Q9UPN6 1271 aaKnown RBP24.93■■□□□ 1.58
NDEL1-209ENST00000580738 REM2Q8IYK8 340 aaPredicted RBP24.92■■□□□ 1.58
NDEL1-209ENST00000580738 AGBL3Q8NEM8 1001 aa24.92■■□□□ 1.58
NDEL1-209ENST00000580738 GGA1Q9UJY5 639 aa24.92■■□□□ 1.58
NDEL1-209ENST00000580738 TRIM35Q9UPQ4 493 aa24.92■■□□□ 1.58
NDEL1-209ENST00000580738 HPS5Q9UPZ3 1129 aa24.92■■□□□ 1.58
NDEL1-209ENST00000580738 HYPKQ9NX55 129 aa24.91■■□□□ 1.58
NDEL1-209ENST00000580738 HOXB7P09629 217 aa24.9■■□□□ 1.58
NDEL1-209ENST00000580738 FKBP1BP68106 108 aa24.9■■□□□ 1.58
NDEL1-209ENST00000580738 PRPF38BQ5VTL8 546 aaKnown RBP24.9■■□□□ 1.58
NDEL1-209ENST00000580738 GMLQ99445 158 aa24.9■■□□□ 1.58
NDEL1-209ENST00000580738 MYOZ2Q9NPC6 264 aa24.9■■□□□ 1.58
NDEL1-209ENST00000580738 TBC1D8O95759 1140 aa24.89■■□□□ 1.58
NDEL1-209ENST00000580738 ZBTB38Q8NAP3 1195 aaPredicted RBP24.89■■□□□ 1.58
NDEL1-209ENST00000580738 ZNF609O15014 1411 aa24.88■■□□□ 1.57
NDEL1-209ENST00000580738 UBE2Q2LH0YL09 131 aa24.88■■□□□ 1.57
NDEL1-209ENST00000580738 USP17L8P0C7I0 530 aa24.88■■□□□ 1.57
NDEL1-209ENST00000580738 PRAMEF18Q5VWM3 479 aa24.88■■□□□ 1.57
NDEL1-209ENST00000580738 ZNF296Q8WUU4 475 aaPredicted RBP24.88■■□□□ 1.57
NDEL1-209ENST00000580738 DUSP27Q5VZP5 1158 aa24.87■■□□□ 1.57
NDEL1-209ENST00000580738 JARID2Q92833 1246 aaPredicted RBP24.87■■□□□ 1.57
NDEL1-209ENST00000580738 CCDC85AQ96PX6 553 aaPredicted RBP24.87■■□□□ 1.57
NDEL1-209ENST00000580738 PAPPA2Q9BXP8 1791 aa24.86■■□□□ 1.57
NDEL1-209ENST00000580738 RIC3Q7Z5B4 369 aa24.86■■□□□ 1.57
NDEL1-209ENST00000580738 HDAC9Q9UKV0 1011 aa24.86■■□□□ 1.57
NDEL1-209ENST00000580738 PITPNM2Q9BZ72 1349 aa24.86■■□□□ 1.57
NDEL1-209ENST00000580738 WTIPA6NIX2 430 aaPredicted RBP24.85■■□□□ 1.57
NDEL1-209ENST00000580738 PHAXQ9H814 394 aaKnown RBP24.85■■□□□ 1.57
NDEL1-209ENST00000580738 USP17L3A6NCW0 530 aa24.84■■□□□ 1.57
NDEL1-209ENST00000580738 USP17L4A6NCW7 530 aa24.84■■□□□ 1.57
NDEL1-209ENST00000580738 PKN2Q16513 984 aaKnown RBP24.84■■□□□ 1.57
NDEL1-209ENST00000580738 NBPF9Q3BBW0 867 aa24.84■■□□□ 1.57
NDEL1-209ENST00000580738 CCDC152Q4G0S7 254 aa24.84■■□□□ 1.57
NDEL1-209ENST00000580738 USP17L1Q7RTZ2 530 aa24.84■■□□□ 1.57
NDEL1-209ENST00000580738 MYD88Q99836 296 aa24.84■■□□□ 1.57
NDEL1-209ENST00000580738 XDHP47989 1333 aa24.83■■□□□ 1.56
NDEL1-209ENST00000580738 GOLGA2Q08379 1002 aa24.82■■□□□ 1.56
NDEL1-209ENST00000580738 PODNQ7Z5L7 613 aa24.82■■□□□ 1.56
NDEL1-209ENST00000580738 MXD3Q9BW11 206 aa24.82■■□□□ 1.56
NDEL1-209ENST00000580738 PDE8AO60658 829 aa24.81■■□□□ 1.56
NDEL1-209ENST00000580738 PCCAP05165 728 aaPredicted RBP24.81■■□□□ 1.56
NDEL1-209ENST00000580738 HSP90B1P14625 803 aaKnown RBP24.81■■□□□ 1.56
NDEL1-209ENST00000580738 TM4SF4P48230 202 aa24.81■■□□□ 1.56
NDEL1-209ENST00000580738 MKRN3Q13064 507 aaKnown RBP24.81■■□□□ 1.56
NDEL1-209ENST00000580738 TTLL12Q14166 644 aaPredicted RBP24.81■■□□□ 1.56
NDEL1-209ENST00000580738 RALBP1Q15311 655 aa24.81■■□□□ 1.56
NDEL1-209ENST00000580738 RUNDC1Q96C34 613 aa24.81■■□□□ 1.56
NDEL1-209ENST00000580738 MBIPQ9NS73 344 aa24.81■■□□□ 1.56
NDEL1-209ENST00000580738 GPR25O00155 361 aa24.8■■□□□ 1.56
NDEL1-209ENST00000580738 ATP2B4P23634 1241 aa24.8■■□□□ 1.56
NDEL1-209ENST00000580738 ANKRD18AQ8IVF6 992 aa24.8■■□□□ 1.56
NDEL1-209ENST00000580738 CCDC191Q8NCU4 936 aa24.8■■□□□ 1.56
NDEL1-209ENST00000580738 PSME4Q14997 1843 aa24.79■■□□□ 1.56
NDEL1-209ENST00000580738 R3HDMLQ9H3Y0 253 aa24.78■■□□□ 1.56
NDEL1-209ENST00000580738 ELL2O00472 640 aaPredicted RBP24.77■■□□□ 1.56
NDEL1-209ENST00000580738 DACT2Q5SW24 774 aa24.77■■□□□ 1.56
NDEL1-209ENST00000580738 CWC25Q9NXE8 425 aaPredicted RBP24.77■■□□□ 1.56
NDEL1-209ENST00000580738 WNT10BO00744 389 aa24.76■■□□□ 1.55
NDEL1-209ENST00000580738 NOM1Q5C9Z4 860 aaKnown RBP24.76■■□□□ 1.55
NDEL1-209ENST00000580738 FBXO46Q6PJ61 603 aaPredicted RBP24.76■■□□□ 1.55
NDEL1-209ENST00000580738 PTPN12Q05209 780 aaKnown RBP24.75■■□□□ 1.55
NDEL1-209ENST00000580738 ADAMTS8Q9UP79 889 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms