RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 ATXN7O15265 892 aaPredicted RBP6.78□□□□□ -1.32
CDH8-206ENST00000580044 ARAFP10398 606 aa6.78□□□□□ -1.32
CDH8-206ENST00000580044 ABL2P42684 1182 aa6.78□□□□□ -1.32
CDH8-206ENST00000580044 GDF10P55107 478 aa6.78□□□□□ -1.32
CDH8-206ENST00000580044 C8orf34Q49A92 452 aa6.78□□□□□ -1.32
CDH8-206ENST00000580044 ETNK1Q9HBU6 452 aa6.78□□□□□ -1.32
CDH8-206ENST00000580044 HRH3Q9Y5N1 445 aa6.78□□□□□ -1.32
CDH8-206ENST00000580044 IQSEC2Q5JU85 1478 aa6.78□□□□□ -1.32
CDH8-206ENST00000580044 ERCC6L2Q5T890 1561 aa6.78□□□□□ -1.32
CDH8-206ENST00000580044 SPDYE3A6NKU9 549 aa6.77□□□□□ -1.33
CDH8-206ENST00000580044 BACH1O14867 736 aa6.77□□□□□ -1.33
CDH8-206ENST00000580044 INHAP05111 366 aa6.77□□□□□ -1.33
CDH8-206ENST00000580044 ADH6P28332 368 aa6.77□□□□□ -1.33
CDH8-206ENST00000580044 SNRPNP63162 240 aaKnown RBP6.77□□□□□ -1.33
CDH8-206ENST00000580044 NFKBIBQ15653 356 aa6.77□□□□□ -1.33
CDH8-206ENST00000580044 BICDL1Q6ZP65 573 aa6.77□□□□□ -1.33
CDH8-206ENST00000580044 UPF2Q9HAU5 1272 aaKnown RBP6.77□□□□□ -1.33
CDH8-206ENST00000580044 NSD2O96028 1365 aa6.77□□□□□ -1.33
CDH8-206ENST00000580044 ADGRB2O60241 1585 aa6.77□□□□□ -1.33
CDH8-206ENST00000580044 CENPJQ9HC77 1338 aaPredicted RBP6.76□□□□□ -1.33
CDH8-206ENST00000580044 ARHGEF28Q8N1W1 1705 aaKnown RBP6.76□□□□□ -1.33
CDH8-206ENST00000580044 SHISA8B8ZZ34 492 aa6.76□□□□□ -1.33
CDH8-206ENST00000580044 BNIP3LO60238 219 aa6.76□□□□□ -1.33
CDH8-206ENST00000580044 ALAS2P22557 587 aa6.76□□□□□ -1.33
CDH8-206ENST00000580044 CANXP27824 592 aaKnown RBP6.76□□□□□ -1.33
CDH8-206ENST00000580044 SMTNP53814 917 aa6.76□□□□□ -1.33
CDH8-206ENST00000580044 VAC14Q08AM6 782 aa6.76□□□□□ -1.33
CDH8-206ENST00000580044 C20orf194Q5TEA3 1177 aa6.76□□□□□ -1.33
CDH8-206ENST00000580044 PMFBP1Q8TBY8 1022 aa6.76□□□□□ -1.33
CDH8-206ENST00000580044 PUS7Q96PZ0 661 aaKnown RBP6.76□□□□□ -1.33
CDH8-206ENST00000580044 ZCCHC2Q9C0B9 1178 aaKnown RBP6.76□□□□□ -1.33
CDH8-206ENST00000580044 CABP1Q9NZU7 370 aa6.76□□□□□ -1.33
CDH8-206ENST00000580044 HECW2Q9P2P5 1572 aa6.76□□□□□ -1.33
CDH8-206ENST00000580044 KIDINS220Q9ULH0 1771 aa6.76□□□□□ -1.33
CDH8-206ENST00000580044 NEURL1BA8MQ27 555 aa6.75□□□□□ -1.33
CDH8-206ENST00000580044 KHNYNO15037 678 aaKnown RBP6.75□□□□□ -1.33
CDH8-206ENST00000580044 CT47B1P0C2W7 299 aaPredicted RBP6.75□□□□□ -1.33
CDH8-206ENST00000580044 EPXP11678 715 aa6.75□□□□□ -1.33
CDH8-206ENST00000580044 BAG6P46379 1132 aa6.75□□□□□ -1.33
CDH8-206ENST00000580044 CTBSQ01459 385 aa6.75□□□□□ -1.33
CDH8-206ENST00000580044 PSME1Q06323 249 aa6.75□□□□□ -1.33
CDH8-206ENST00000580044 PHTF2Q8N3S3 785 aa6.75□□□□□ -1.33
CDH8-206ENST00000580044 PLPP7Q8NBV4 271 aa6.75□□□□□ -1.33
CDH8-206ENST00000580044 CLUAP1Q96AJ1 413 aa6.75□□□□□ -1.33
CDH8-206ENST00000580044 BTBD6Q96KE9 485 aa6.75□□□□□ -1.33
CDH8-206ENST00000580044 CFAP53Q96M91 514 aa6.75□□□□□ -1.33
CDH8-206ENST00000580044 AVENQ9NQS1 362 aaPredicted RBP6.75□□□□□ -1.33
CDH8-206ENST00000580044 SERTAD1Q9UHV2 236 aa6.75□□□□□ -1.33
CDH8-206ENST00000580044 GLI2P10070 1586 aa6.74□□□□□ -1.33
CDH8-206ENST00000580044 ZNF518AQ6AHZ1 1483 aa6.74□□□□□ -1.33
CDH8-206ENST00000580044 A0A1W2PNR3 127 aa6.74□□□□□ -1.33
CDH8-206ENST00000580044 APAF1O14727 1248 aa6.74□□□□□ -1.33
CDH8-206ENST00000580044 LZTS3O60299 673 aaPredicted RBP6.74□□□□□ -1.33
CDH8-206ENST00000580044 CCDC27Q2M243 656 aa6.74□□□□□ -1.33
CDH8-206ENST00000580044 EML3Q32P44 896 aa6.74□□□□□ -1.33
CDH8-206ENST00000580044 WDR63Q8IWG1 891 aa6.74□□□□□ -1.33
CDH8-206ENST00000580044 RUNDC1Q96C34 613 aa6.74□□□□□ -1.33
CDH8-206ENST00000580044 CHMP3Q9Y3E7 222 aa6.74□□□□□ -1.33
CDH8-206ENST00000580044 PIK3C2BO00750 1634 aa6.74□□□□□ -1.33
CDH8-206ENST00000580044 CAMSAP1Q5T5Y3 1602 aa6.74□□□□□ -1.33
CDH8-206ENST00000580044 RPGRIP1LQ68CZ1 1315 aa6.74□□□□□ -1.33
CDH8-206ENST00000580044 ADGRB1O14514 1584 aa6.74□□□□□ -1.33
CDH8-206ENST00000580044 FRMPD1Q5SYB0 1578 aa6.74□□□□□ -1.33
CDH8-206ENST00000580044 CDK2AP1O14519 115 aa6.73□□□□□ -1.33
CDH8-206ENST00000580044 FAM182BQ5T319 152 aa6.73□□□□□ -1.33
CDH8-206ENST00000580044 GDPD2Q9HCC8 539 aa6.73□□□□□ -1.33
CDH8-206ENST00000580044 ZDHHC3Q9NYG2 299 aa6.73□□□□□ -1.33
CDH8-206ENST00000580044 NOD1Q9Y239 953 aa6.73□□□□□ -1.33
CDH8-206ENST00000580044 CLTCQ00610 1675 aaKnown RBP6.73□□□□□ -1.33
CDH8-206ENST00000580044 NSD3Q9BZ95 1437 aa6.73□□□□□ -1.33
CDH8-206ENST00000580044 REREQ9P2R6 1566 aa6.73□□□□□ -1.33
CDH8-206ENST00000580044 KIF20BQ96Q89 1820 aa6.72□□□□□ -1.33
CDH8-206ENST00000580044 DCDC2BA2VCK2 349 aa6.72□□□□□ -1.33
CDH8-206ENST00000580044 KRBA1A5PL33 1030 aa6.72□□□□□ -1.33
CDH8-206ENST00000580044 A6NJY4 79 aa6.72□□□□□ -1.33
CDH8-206ENST00000580044 GPR37L1O60883 481 aa6.72□□□□□ -1.33
CDH8-206ENST00000580044 PROCP04070 461 aa6.72□□□□□ -1.33
CDH8-206ENST00000580044 RGS3P49796 1198 aa6.72□□□□□ -1.33
CDH8-206ENST00000580044 TSGA10IPQ3SY00 556 aa6.72□□□□□ -1.33
CDH8-206ENST00000580044 L1TD1Q5T7N2 865 aaKnown RBP6.72□□□□□ -1.33
CDH8-206ENST00000580044 CCDC146Q8IYE0 955 aa6.72□□□□□ -1.33
CDH8-206ENST00000580044 RWDD1Q9H446 243 aaPredicted RBP6.72□□□□□ -1.33
CDH8-206ENST00000580044 MYH16Q9H6N6 1097 aa6.72□□□□□ -1.33
CDH8-206ENST00000580044 NDFIP2Q9NV92 336 aa6.72□□□□□ -1.33
CDH8-206ENST00000580044 UGGT1Q9NYU2 1555 aa6.72□□□□□ -1.33
CDH8-206ENST00000580044 NLRP1Q9C000 1473 aa6.72□□□□□ -1.33
CDH8-206ENST00000580044 ABCC11Q96J66 1382 aa6.71□□□□□ -1.33
CDH8-206ENST00000580044 C2CD2LO14523 706 aa6.71□□□□□ -1.34
CDH8-206ENST00000580044 THBS1P07996 1170 aa6.71□□□□□ -1.34
CDH8-206ENST00000580044 MAPTP10636 758 aaKnown RBP6.71□□□□□ -1.34
CDH8-206ENST00000580044 LAMC2Q13753 1193 aa6.71□□□□□ -1.34
CDH8-206ENST00000580044 UBAP2LQ14157 1087 aaKnown RBP6.71□□□□□ -1.34
CDH8-206ENST00000580044 C1orf229Q6ZS94 237 aaPredicted RBP6.71□□□□□ -1.34
CDH8-206ENST00000580044 CHSY3Q70JA7 882 aa6.71□□□□□ -1.34
CDH8-206ENST00000580044 FAM43AQ8N2R8 423 aa6.71□□□□□ -1.34
CDH8-206ENST00000580044 MARK1Q9P0L2 795 aa6.71□□□□□ -1.34
CDH8-206ENST00000580044 MED14O60244 1454 aa6.71□□□□□ -1.34
CDH8-206ENST00000580044 ANKRD36BQ8N2N9 1353 aa6.7□□□□□ -1.34
CDH8-206ENST00000580044 RAD21O60216 631 aa6.7□□□□□ -1.34
CDH8-206ENST00000580044 EIF5BO60841 1220 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms