RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 TAF7LQ5H9L4 462 aa28.38■■■□□ 2.13
NDEL1-207ENST00000580012 COPRSQ9NQ92 184 aa28.38■■■□□ 2.13
NDEL1-207ENST00000580012 PNMA6EA0A0J9YXQ4 647 aa28.37■■■□□ 2.13
NDEL1-207ENST00000580012 SRGAP3O43295 1099 aa28.37■■■□□ 2.13
NDEL1-207ENST00000580012 RASSF7Q02833 373 aa28.37■■■□□ 2.13
NDEL1-207ENST00000580012 POLA2Q14181 598 aa28.37■■■□□ 2.13
NDEL1-207ENST00000580012 DPP8Q6V1X1 898 aaPredicted RBP28.37■■■□□ 2.13
NDEL1-207ENST00000580012 KLHDC4Q8TBB5 520 aa28.37■■■□□ 2.13
NDEL1-207ENST00000580012 PUS3Q9BZE2 481 aaKnown RBP28.37■■■□□ 2.13
NDEL1-207ENST00000580012 NSFL1CQ9UNZ2 370 aaKnown RBP28.37■■■□□ 2.13
NDEL1-207ENST00000580012 TAF1P21675 1872 aa28.37■■■□□ 2.13
NDEL1-207ENST00000580012 CEP85Q6P2H3 762 aa28.36■■■□□ 2.13
NDEL1-207ENST00000580012 SSH3Q8TE77 659 aa28.36■■■□□ 2.13
NDEL1-207ENST00000580012 FBXO3Q9UK99 471 aa28.36■■■□□ 2.13
NDEL1-207ENST00000580012 CRBNQ96SW2 442 aa28.35■■■□□ 2.13
NDEL1-207ENST00000580012 ANKRD2Q9GZV1 360 aa28.35■■■□□ 2.13
NDEL1-207ENST00000580012 VPS33BQ9H267 617 aa28.35■■■□□ 2.13
NDEL1-207ENST00000580012 POLLQ9UGP5 575 aa28.35■■■□□ 2.13
NDEL1-207ENST00000580012 LMNB1P20700 586 aa28.34■■■□□ 2.13
NDEL1-207ENST00000580012 CHRNDQ07001 517 aa28.34■■■□□ 2.13
NDEL1-207ENST00000580012 RPAP2Q8IXW5 612 aaPredicted RBP28.34■■■□□ 2.13
NDEL1-207ENST00000580012 TBC1D16Q8TBP0 767 aa28.34■■■□□ 2.13
NDEL1-207ENST00000580012 XDHP47989 1333 aa28.34■■■□□ 2.13
NDEL1-207ENST00000580012 EYA2O00167 538 aa28.33■■■□□ 2.13
NDEL1-207ENST00000580012 LRRC24Q50LG9 513 aa28.33■■■□□ 2.13
NDEL1-207ENST00000580012 SUPT20HQ8NEM7 779 aa28.33■■■□□ 2.13
NDEL1-207ENST00000580012 CNNM1Q9NRU3 951 aa28.33■■■□□ 2.13
NDEL1-207ENST00000580012 CIAO1O76071 339 aa28.32■■■□□ 2.12
NDEL1-207ENST00000580012 ATP2B4P23634 1241 aa28.32■■■□□ 2.12
NDEL1-207ENST00000580012 ATG9AQ7Z3C6 839 aa28.32■■■□□ 2.12
NDEL1-207ENST00000580012 ZNF277Q9NRM2 450 aaPredicted RBP28.32■■■□□ 2.12
NDEL1-207ENST00000580012 ANKIB1Q9P2G1 1089 aa28.32■■■□□ 2.12
NDEL1-207ENST00000580012 C1QTNF8P60827 252 aa28.31■■■□□ 2.12
NDEL1-207ENST00000580012 SIRT2Q8IXJ6 389 aa28.31■■■□□ 2.12
NDEL1-207ENST00000580012 GGA1Q9UJY5 639 aa28.31■■■□□ 2.12
NDEL1-207ENST00000580012 PA2G4Q9UQ80 394 aaKnown RBP28.31■■■□□ 2.12
NDEL1-207ENST00000580012 LEMD3Q9Y2U8 911 aa28.31■■■□□ 2.12
NDEL1-207ENST00000580012 LRRC37AA6NMS7 1700 aa28.31■■■□□ 2.12
NDEL1-207ENST00000580012 MROH5Q6ZUA9 1318 aa28.3■■■□□ 2.12
NDEL1-207ENST00000580012 WTIPA6NIX2 430 aaPredicted RBP28.3■■■□□ 2.12
NDEL1-207ENST00000580012 IARSP41252 1262 aaKnown RBP28.3■■■□□ 2.12
NDEL1-207ENST00000580012 C9orf131Q5VYM1 1079 aa28.3■■■□□ 2.12
NDEL1-207ENST00000580012 FER1L6Q2WGJ9 1857 aa28.29■■■□□ 2.12
NDEL1-207ENST00000580012 KIAA2012Q0VF49 1180 aa28.28■■■□□ 2.12
NDEL1-207ENST00000580012 VGLL2Q8N8G2 317 aa28.28■■■□□ 2.12
NDEL1-207ENST00000580012 HELBQ8NG08 1087 aaPredicted RBP28.28■■■□□ 2.12
NDEL1-207ENST00000580012 NOP58Q9Y2X3 529 aaKnown RBP28.28■■■□□ 2.12
NDEL1-207ENST00000580012 C6orf229H3BNL8 230 aa28.27■■■□□ 2.12
NDEL1-207ENST00000580012 TAF5LO75529 589 aa28.27■■■□□ 2.12
NDEL1-207ENST00000580012 UFL1O94874 794 aa28.27■■■□□ 2.12
NDEL1-207ENST00000580012 AAMPQ13685 434 aa28.27■■■□□ 2.12
NDEL1-207ENST00000580012 RNF181Q9P0P0 153 aa28.27■■■□□ 2.12
NDEL1-207ENST00000580012 DUOX1Q9NRD9 1551 aa28.27■■■□□ 2.12
NDEL1-207ENST00000580012 CACNA1SQ13698 1873 aa28.27■■■□□ 2.12
NDEL1-207ENST00000580012 IL15P40933 162 aaPredicted RBP28.26■■■□□ 2.11
NDEL1-207ENST00000580012 EYA3Q99504 573 aa28.26■■■□□ 2.11
NDEL1-207ENST00000580012 ZNF804BA4D1E1 1349 aa28.25■■■□□ 2.11
NDEL1-207ENST00000580012 WASHC4Q2M389 1173 aa28.25■■■□□ 2.11
NDEL1-207ENST00000580012 C15orf52Q6ZUT6 534 aaKnown RBP28.25■■■□□ 2.11
NDEL1-207ENST00000580012 SIL1Q9H173 461 aa28.25■■■□□ 2.11
NDEL1-207ENST00000580012 IRS2Q9Y4H2 1338 aa28.24■■■□□ 2.11
NDEL1-207ENST00000580012 LTBP1Q14766 1721 aa28.24■■■□□ 2.11
NDEL1-207ENST00000580012 PDE8BO95263 885 aa28.24■■■□□ 2.11
NDEL1-207ENST00000580012 METTL24Q5JXM2 366 aa28.24■■■□□ 2.11
NDEL1-207ENST00000580012 PCDHB15Q9Y5E8 787 aa28.24■■■□□ 2.11
NDEL1-207ENST00000580012 SNAP23O00161 211 aa28.23■■■□□ 2.11
NDEL1-207ENST00000580012 PPIP5K2O43314 1243 aa28.23■■■□□ 2.11
NDEL1-207ENST00000580012 UBE4AQ14139 1066 aa28.23■■■□□ 2.11
NDEL1-207ENST00000580012 AOC3Q16853 763 aa28.23■■■□□ 2.11
NDEL1-207ENST00000580012 LARGE2Q8N3Y3 721 aa28.23■■■□□ 2.11
NDEL1-207ENST00000580012 EXOC6Q8TAG9 804 aa28.23■■■□□ 2.11
NDEL1-207ENST00000580012 GPR101Q96P66 508 aaPredicted RBP28.23■■■□□ 2.11
NDEL1-207ENST00000580012 ZC3H12CQ9C0D7 883 aaKnown RBP28.23■■■□□ 2.11
NDEL1-207ENST00000580012 CENPBP07199 599 aaPredicted RBP28.22■■■□□ 2.11
NDEL1-207ENST00000580012 ZC3H4Q9UPT8 1303 aaKnown RBP28.21■■■□□ 2.11
NDEL1-207ENST00000580012 HMMRO75330 724 aa28.21■■■□□ 2.11
NDEL1-207ENST00000580012 FGFR2P21802 821 aa28.21■■■□□ 2.11
NDEL1-207ENST00000580012 CEP126Q9P2H0 1117 aa28.21■■■□□ 2.11
NDEL1-207ENST00000580012 FZD9O00144 591 aa28.2■■■□□ 2.1
NDEL1-207ENST00000580012 SURF6O75683 361 aaKnown RBP28.2■■■□□ 2.1
NDEL1-207ENST00000580012 G3BP1Q13283 466 aaKnown RBP eCLIP28.2■■■□□ 2.1
NDEL1-207ENST00000580012 TXNRD3Q86VQ6 643 aa28.2■■■□□ 2.1
NDEL1-207ENST00000580012 MED23Q9ULK4 1368 aa28.2■■■□□ 2.1
NDEL1-207ENST00000580012 RIMBP2O15034 1052 aa28.19■■■□□ 2.1
NDEL1-207ENST00000580012 JDP2Q8WYK2 163 aa28.19■■■□□ 2.1
NDEL1-207ENST00000580012 SASH1O94885 1247 aa28.18■■■□□ 2.1
NDEL1-207ENST00000580012 KLRK1P26718 216 aa28.18■■■□□ 2.1
NDEL1-207ENST00000580012 KCNJ4P48050 445 aa28.18■■■□□ 2.1
NDEL1-207ENST00000580012 COL4A5P29400 1685 aa28.18■■■□□ 2.1
NDEL1-207ENST00000580012 NIM1KQ8IY84 436 aa28.17■■■□□ 2.1
NDEL1-207ENST00000580012 ZNRF3Q9ULT6 936 aa28.17■■■□□ 2.1
NDEL1-207ENST00000580012 TFCP2Q12800 502 aa28.16■■■□□ 2.1
NDEL1-207ENST00000580012 PUM3Q15397 648 aaKnown RBP28.16■■■□□ 2.1
NDEL1-207ENST00000580012 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.16■■■□□ 2.1
NDEL1-207ENST00000580012 SBF1O95248 1867 aa28.16■■■□□ 2.1
NDEL1-207ENST00000580012 IRX6P78412 446 aaPredicted RBP28.15■■■□□ 2.1
NDEL1-207ENST00000580012 LPIN2Q92539 896 aa28.15■■■□□ 2.1
NDEL1-207ENST00000580012 YDJCA8MPS7 323 aa28.14■■■□□ 2.1
NDEL1-207ENST00000580012 DOK7Q18PE1 504 aa28.14■■■□□ 2.1
NDEL1-207ENST00000580012 HSP90AB4PQ58FF6 505 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms