RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, human

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LIMD2-208	ENST00000579814	RAD17	O75943	681 aa		33.18	■■■□□ 2.9
LIMD2-208	ENST00000579814	POTEI	P0CG38	1075 aa		33.18	■■■□□ 2.9
LIMD2-208	ENST00000579814	POTEJ	P0CG39	1038 aa		33.18	■■■□□ 2.9
LIMD2-208	ENST00000579814	FAM161A	Q3B820	660 aa		33.18	■■■□□ 2.9
LIMD2-208	ENST00000579814	SMC4	Q9NTJ3	1288 aa		33.18	■■■□□ 2.9
LIMD2-208	ENST00000579814	XDH	P47989	1333 aa		33.18	■■■□□ 2.9
LIMD2-208	ENST00000579814	COL4A1	P02462	1669 aa		33.17	■■■□□ 2.9
LIMD2-208	ENST00000579814	ATP2B4	P23634	1241 aa		33.17	■■■□□ 2.9
LIMD2-208	ENST00000579814	SCNN1D	P51172	638 aa		33.17	■■■□□ 2.9
LIMD2-208	ENST00000579814	MINPP1	Q9UNW1	487 aa		33.17	■■■□□ 2.9
LIMD2-208	ENST00000579814	CLEC11A	Q9Y240	323 aa		33.17	■■■□□ 2.9
LIMD2-208	ENST00000579814		G3V3G9	751 aa		33.16	■■■□□ 2.9
LIMD2-208	ENST00000579814	FOXO4	P98177	505 aa		33.16	■■■□□ 2.9
LIMD2-208	ENST00000579814	DCAF8	Q5TAQ9	597 aa		33.16	■■■□□ 2.9
LIMD2-208	ENST00000579814	GPR101	Q96P66	508 aa	Predicted RBP	33.16	■■■□□ 2.9
LIMD2-208	ENST00000579814	MPHOSPH8	Q99549	860 aa		33.16	■■■□□ 2.9
LIMD2-208	ENST00000579814	DBNDD1	Q9H9R9	158 aa		33.16	■■■□□ 2.9
LIMD2-208	ENST00000579814	ANKRD18B	A2A2Z9	1011 aa		33.15	■■■□□ 2.9
LIMD2-208	ENST00000579814	YDJC	A8MPS7	323 aa		33.15	■■■□□ 2.9
LIMD2-208	ENST00000579814	LRRC37A	A6NMS7	1700 aa		33.14	■■■□□ 2.9
LIMD2-208	ENST00000579814	DUOX1	Q9NRD9	1551 aa		33.14	■■■□□ 2.9
LIMD2-208	ENST00000579814	EPS15	P42566	896 aa		33.14	■■■□□ 2.9
LIMD2-208	ENST00000579814	IFIT5	Q13325	482 aa	Known RBP	33.14	■■■□□ 2.9
LIMD2-208	ENST00000579814	DOK7	Q18PE1	504 aa		33.14	■■■□□ 2.9
LIMD2-208	ENST00000579814	CHMP3	Q9Y3E7	222 aa		33.14	■■■□□ 2.9
LIMD2-208	ENST00000579814	ECE2	O60344	883 aa		33.12	■■■□□ 2.89
LIMD2-208	ENST00000579814	GMPS	P49915	693 aa	Predicted RBP	33.12	■■■□□ 2.89
LIMD2-208	ENST00000579814	LMBR1L	Q6UX01	489 aa		33.12	■■■□□ 2.89
LIMD2-208	ENST00000579814	GPRC5D	Q9NZD1	345 aa		33.12	■■■□□ 2.89
LIMD2-208	ENST00000579814	HNRNPU	Q00839	825 aa	Known RBP eCLIP	33.11	■■■□□ 2.89
LIMD2-208	ENST00000579814	SCN4A	P35499	1836 aa		33.1	■■■□□ 2.89
LIMD2-208	ENST00000579814	EPHA10	Q5JZY3	1008 aa		33.1	■■■□□ 2.89
LIMD2-208	ENST00000579814	USP50	Q70EL3	339 aa	Predicted RBP	33.1	■■■□□ 2.89
LIMD2-208	ENST00000579814	ANKRD2	Q9GZV1	360 aa		33.1	■■■□□ 2.89
LIMD2-208	ENST00000579814	CCDC57	Q2TAC2	916 aa		33.09	■■■□□ 2.89
LIMD2-208	ENST00000579814	ADARB2	Q9NS39	739 aa	Known RBP	33.09	■■■□□ 2.89
LIMD2-208	ENST00000579814	CCT4	P50991	539 aa	Known RBP	33.08	■■■□□ 2.89
LIMD2-208	ENST00000579814	LEMD3	Q9Y2U8	911 aa		33.08	■■■□□ 2.89
LIMD2-208	ENST00000579814	PSMD14	O00487	310 aa		33.07	■■■□□ 2.88
LIMD2-208	ENST00000579814	NBPF7	P0C2Y1	421 aa	Predicted RBP	33.07	■■■□□ 2.88
LIMD2-208	ENST00000579814	BRPF1	P55201	1214 aa	Predicted RBP	33.07	■■■□□ 2.88
LIMD2-208	ENST00000579814	NOB1	Q9ULX3	412 aa	Known RBP	33.07	■■■□□ 2.88
LIMD2-208	ENST00000579814	UTY	O14607	1347 aa		33.06	■■■□□ 2.88
LIMD2-208	ENST00000579814	HTRA3	P83110	453 aa		33.06	■■■□□ 2.88
LIMD2-208	ENST00000579814	TAF7L	Q5H9L4	462 aa		33.06	■■■□□ 2.88
LIMD2-208	ENST00000579814	SUCLG2	Q96I99	432 aa		33.06	■■■□□ 2.88
LIMD2-208	ENST00000579814	RARS	P54136	660 aa	Known RBP	33.05	■■■□□ 2.88
LIMD2-208	ENST00000579814	CNTROB	Q8N137	903 aa		33.05	■■■□□ 2.88
LIMD2-208	ENST00000579814	KCNQ5	Q9NR82	932 aa		33.05	■■■□□ 2.88
LIMD2-208	ENST00000579814	MAP1S	Q66K74	1059 aa	Predicted RBP	33.04	■■■□□ 2.88
LIMD2-208	ENST00000579814	DNAJC5G	Q8N7S2	189 aa		33.04	■■■□□ 2.88
LIMD2-208	ENST00000579814	DPF2	Q92785	391 aa		33.04	■■■□□ 2.88
LIMD2-208	ENST00000579814	CNOT7	Q9UIV1	285 aa	Known RBP	33.04	■■■□□ 2.88
LIMD2-208	ENST00000579814	ZBTB12	Q9Y330	459 aa	Predicted RBP	33.04	■■■□□ 2.88
LIMD2-208	ENST00000579814		H7C1D1	291 aa		33.03	■■■□□ 2.88
LIMD2-208	ENST00000579814	CHRND	Q07001	517 aa		33.03	■■■□□ 2.88
LIMD2-208	ENST00000579814	PODN	Q7Z5L7	613 aa		33.03	■■■□□ 2.88
LIMD2-208	ENST00000579814	API5	Q9BZZ5	524 aa	Known RBP	33.03	■■■□□ 2.88
LIMD2-208	ENST00000579814	WTIP	A6NIX2	430 aa	Predicted RBP	33.02	■■■□□ 2.88
LIMD2-208	ENST00000579814	ITGBL1	O95965	494 aa	Predicted RBP	33.02	■■■□□ 2.88
LIMD2-208	ENST00000579814	RPS12	P25398	132 aa	Known RBP	33.02	■■■□□ 2.88
LIMD2-208	ENST00000579814	ZNF804B	A4D1E1	1349 aa		33.02	■■■□□ 2.88
LIMD2-208	ENST00000579814	KCNJ4	P48050	445 aa		33.01	■■■□□ 2.87
LIMD2-208	ENST00000579814	KAZALD1	Q96I82	304 aa		33.01	■■■□□ 2.87
LIMD2-208	ENST00000579814	USP44	Q9H0E7	712 aa		33.01	■■■□□ 2.87
LIMD2-208	ENST00000579814	CEP350	Q5VT06	3117 aa		33.01	■■■□□ 2.87
LIMD2-208	ENST00000579814	LTBP1	Q14766	1721 aa		33	■■■□□ 2.87
LIMD2-208	ENST00000579814	MED23	Q9ULK4	1368 aa		33	■■■□□ 2.87
LIMD2-208	ENST00000579814	VIL1	P09327	827 aa	Known RBP	33	■■■□□ 2.87
LIMD2-208	ENST00000579814	LDHAL6A	Q6ZMR3	332 aa		33	■■■□□ 2.87
LIMD2-208	ENST00000579814	MYH3	P11055	1940 aa		32.99	■■■□□ 2.87
LIMD2-208	ENST00000579814	MICALL2	Q8IY33	904 aa		32.99	■■■□□ 2.87
LIMD2-208	ENST00000579814	ZNF594	Q96JF6	807 aa	Predicted RBP	32.99	■■■□□ 2.87
LIMD2-208	ENST00000579814	PASK	Q96RG2	1323 aa		32.99	■■■□□ 2.87
LIMD2-208	ENST00000579814	BICC1	Q9H694	974 aa	Known RBP	32.98	■■■□□ 2.87
LIMD2-208	ENST00000579814	CNNM1	Q9NRU3	951 aa		32.98	■■■□□ 2.87
LIMD2-208	ENST00000579814	KLRG1	Q96E93	195 aa		32.97	■■■□□ 2.87
LIMD2-208	ENST00000579814	COA1	Q9GZY4	146 aa		32.97	■■■□□ 2.87
LIMD2-208	ENST00000579814	KIF16B	Q96L93	1317 aa		32.97	■■■□□ 2.87
LIMD2-208	ENST00000579814	RABL6	Q3YEC7	729 aa	Predicted RBP	32.96	■■■□□ 2.87
LIMD2-208	ENST00000579814	ARHGAP45	Q92619	1136 aa		32.96	■■■□□ 2.87
LIMD2-208	ENST00000579814	CREBZF	Q9NS37	354 aa		32.96	■■■□□ 2.87
LIMD2-208	ENST00000579814	USP17L3	A6NCW0	530 aa		32.95	■■■□□ 2.87
LIMD2-208	ENST00000579814	USP17L4	A6NCW7	530 aa		32.95	■■■□□ 2.87
LIMD2-208	ENST00000579814	TAF5L	O75529	589 aa		32.95	■■■□□ 2.87
LIMD2-208	ENST00000579814	USP17L1	Q7RTZ2	530 aa		32.95	■■■□□ 2.87
LIMD2-208	ENST00000579814	HELB	Q8NG08	1087 aa	Predicted RBP	32.95	■■■□□ 2.87
LIMD2-208	ENST00000579814	ZC3H15	Q8WU90	426 aa	Known RBP	32.95	■■■□□ 2.87
LIMD2-208	ENST00000579814	SHTN1	A0MZ66	631 aa		32.94	■■■□□ 2.86
LIMD2-208	ENST00000579814	RSBN1L	Q6PCB5	846 aa	Predicted RBP	32.94	■■■□□ 2.86
LIMD2-208	ENST00000579814	IPO8	O15397	1037 aa	Known RBP	32.93	■■■□□ 2.86
LIMD2-208	ENST00000579814	TXNRD3	Q86VQ6	643 aa		32.93	■■■□□ 2.86
LIMD2-208	ENST00000579814	AGBL3	Q8NEM8	1001 aa		32.93	■■■□□ 2.86
LIMD2-208	ENST00000579814	HIRA	P54198	1017 aa	Predicted RBP	32.92	■■■□□ 2.86
LIMD2-208	ENST00000579814	ANKRD44	Q8N8A2	993 aa		32.92	■■■□□ 2.86
LIMD2-208	ENST00000579814	TRPM4	Q8TD43	1214 aa		32.92	■■■□□ 2.86
LIMD2-208	ENST00000579814	PGAP2	Q9UHJ9	254 aa		32.92	■■■□□ 2.86
LIMD2-208	ENST00000579814	TMEM88B	A6NKF7	163 aa		32.91	■■■□□ 2.86
LIMD2-208	ENST00000579814	PLIN1	O60240	522 aa		32.91	■■■□□ 2.86
LIMD2-208	ENST00000579814	SAMD7	Q7Z3H4	446 aa		32.91	■■■□□ 2.86

Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms