RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-210	ENST00000579308	SEC31B	Q9NQW1	1179 aa		13.81	□□□□□ -0.2
CSNK1D-210	ENST00000579308	COL4A1	P02462	1669 aa		13.81	□□□□□ -0.2
CSNK1D-210	ENST00000579308	LAMB2	P55268	1798 aa		13.81	□□□□□ -0.2
CSNK1D-210	ENST00000579308	ELL2	O00472	640 aa	Predicted RBP	13.8	□□□□□ -0.2
CSNK1D-210	ENST00000579308	ECE2	O60344	883 aa		13.8	□□□□□ -0.2
CSNK1D-210	ENST00000579308	PCCA	P05165	728 aa	Predicted RBP	13.8	□□□□□ -0.2
CSNK1D-210	ENST00000579308	GOLGA2	Q08379	1002 aa		13.8	□□□□□ -0.2
CSNK1D-210	ENST00000579308	CCDC191	Q8NCU4	936 aa		13.8	□□□□□ -0.2
CSNK1D-210	ENST00000579308	THSD7B	Q9C0I4	1608 aa		13.79	□□□□□ -0.2
CSNK1D-210	ENST00000579308	CA12	O43570	354 aa		13.79	□□□□□ -0.2
CSNK1D-210	ENST00000579308	HSP90B1	P14625	803 aa	Known RBP	13.79	□□□□□ -0.2
CSNK1D-210	ENST00000579308	BRPF1	P55201	1214 aa	Predicted RBP	13.79	□□□□□ -0.2
CSNK1D-210	ENST00000579308	CALD1	Q05682	793 aa	Known RBP	13.79	□□□□□ -0.2
CSNK1D-210	ENST00000579308	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.79	□□□□□ -0.2
CSNK1D-210	ENST00000579308	MYD88	Q99836	296 aa		13.79	□□□□□ -0.2
CSNK1D-210	ENST00000579308	METTL22	Q9BUU2	404 aa	Predicted RBP	13.79	□□□□□ -0.2
CSNK1D-210	ENST00000579308	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.79	□□□□□ -0.2
CSNK1D-210	ENST00000579308	ZNF408	Q9H9D4	720 aa		13.79	□□□□□ -0.2
CSNK1D-210	ENST00000579308	LRRC37A	A6NMS7	1700 aa		13.78	□□□□□ -0.2
CSNK1D-210	ENST00000579308	PDE8A	O60658	829 aa		13.78	□□□□□ -0.2
CSNK1D-210	ENST00000579308	KRT26	Q7Z3Y9	468 aa		13.78	□□□□□ -0.2
CSNK1D-210	ENST00000579308	ZIC5	Q96T25	663 aa		13.78	□□□□□ -0.2
CSNK1D-210	ENST00000579308	CWC25	Q9NXE8	425 aa	Predicted RBP	13.78	□□□□□ -0.2
CSNK1D-210	ENST00000579308	TSKS	Q9UJT2	592 aa		13.78	□□□□□ -0.2
CSNK1D-210	ENST00000579308	DDX60	Q8IY21	1712 aa	Known RBP	13.78	□□□□□ -0.2
CSNK1D-210	ENST00000579308	TAF1	P21675	1872 aa		13.77	□□□□□ -0.21
CSNK1D-210	ENST00000579308	CCDC152	Q4G0S7	254 aa		13.77	□□□□□ -0.21
CSNK1D-210	ENST00000579308	TSPYL6	Q8N831	410 aa		13.77	□□□□□ -0.21
CSNK1D-210	ENST00000579308	JARID2	Q92833	1246 aa	Predicted RBP	13.77	□□□□□ -0.21
CSNK1D-210	ENST00000579308	ANKIB1	Q9P2G1	1089 aa		13.77	□□□□□ -0.21
CSNK1D-210	ENST00000579308	GGA1	Q9UJY5	639 aa		13.77	□□□□□ -0.21
CSNK1D-210	ENST00000579308	FAM155A	B1AL88	458 aa	Predicted RBP	13.76	□□□□□ -0.21
CSNK1D-210	ENST00000579308	UFL1	O94874	794 aa		13.76	□□□□□ -0.21
CSNK1D-210	ENST00000579308	HUNK	P57058	714 aa		13.76	□□□□□ -0.21
CSNK1D-210	ENST00000579308	ZNF280A	P59817	542 aa	Predicted RBP	13.76	□□□□□ -0.21
CSNK1D-210	ENST00000579308	NOG	Q13253	232 aa		13.76	□□□□□ -0.21
CSNK1D-210	ENST00000579308	RBM26	Q5T8P6	1007 aa	Known RBP	13.76	□□□□□ -0.21
CSNK1D-210	ENST00000579308	CCDC30	Q5VVM6	783 aa		13.76	□□□□□ -0.21
CSNK1D-210	ENST00000579308	GML	Q99445	158 aa		13.76	□□□□□ -0.21
CSNK1D-210	ENST00000579308	TRPM7	Q96QT4	1865 aa		13.76	□□□□□ -0.21
CSNK1D-210	ENST00000579308	ADM5	C9JUS6	153 aa		13.75	□□□□□ -0.21
CSNK1D-210	ENST00000579308	IGKV5-2	P06315	115 aa		13.75	□□□□□ -0.21
CSNK1D-210	ENST00000579308	KSR2	Q6VAB6	950 aa		13.75	□□□□□ -0.21
CSNK1D-210	ENST00000579308	DCPS	Q96C86	337 aa	Known RBP	13.75	□□□□□ -0.21
CSNK1D-210	ENST00000579308	CHMP4A	Q9BY43	222 aa		13.75	□□□□□ -0.21
CSNK1D-210	ENST00000579308	GBA2	Q9HCG7	927 aa	Predicted RBP	13.75	□□□□□ -0.21
CSNK1D-210	ENST00000579308	MAP3K2	Q9Y2U5	619 aa		13.75	□□□□□ -0.21
CSNK1D-210	ENST00000579308	ASTN2	O75129	1339 aa	Predicted RBP	13.74	□□□□□ -0.21
CSNK1D-210	ENST00000579308	WTIP	A6NIX2	430 aa	Predicted RBP	13.74	□□□□□ -0.21
CSNK1D-210	ENST00000579308	DDX58	O95786	925 aa	Known RBP	13.74	□□□□□ -0.21
CSNK1D-210	ENST00000579308	KIF4B	Q2VIQ3	1234 aa		13.74	□□□□□ -0.21
CSNK1D-210	ENST00000579308	RGMB	Q6NW40	437 aa		13.74	□□□□□ -0.21
CSNK1D-210	ENST00000579308	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.74	□□□□□ -0.21
CSNK1D-210	ENST00000579308	AGBL3	Q8NEM8	1001 aa		13.74	□□□□□ -0.21
CSNK1D-210	ENST00000579308	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.74	□□□□□ -0.21
CSNK1D-210	ENST00000579308	ZNF609	O15014	1411 aa		13.73	□□□□□ -0.21
CSNK1D-210	ENST00000579308	XDH	P47989	1333 aa		13.73	□□□□□ -0.21
CSNK1D-210	ENST00000579308	PI4KAP2	A4QPH2	592 aa		13.73	□□□□□ -0.21
CSNK1D-210	ENST00000579308	ATP2B4	P23634	1241 aa		13.73	□□□□□ -0.21
CSNK1D-210	ENST00000579308	RGS19	P49795	217 aa		13.73	□□□□□ -0.21
CSNK1D-210	ENST00000579308	CTSW	P56202	376 aa		13.73	□□□□□ -0.21
CSNK1D-210	ENST00000579308	ANKRD18A	Q8IVF6	992 aa		13.73	□□□□□ -0.21
CSNK1D-210	ENST00000579308	PI4KAP1	Q8N8J0	262 aa		13.73	□□□□□ -0.21
CSNK1D-210	ENST00000579308	C2orf69	Q8N8R5	385 aa		13.73	□□□□□ -0.21
CSNK1D-210	ENST00000579308	TTLL11	Q8NHH1	800 aa		13.73	□□□□□ -0.21
CSNK1D-210	ENST00000579308	CCDC102A	Q96A19	550 aa		13.73	□□□□□ -0.21
CSNK1D-210	ENST00000579308	MINPP1	Q9UNW1	487 aa		13.73	□□□□□ -0.21
CSNK1D-210	ENST00000579308		G3V3G9	751 aa		13.72	□□□□□ -0.21
CSNK1D-210	ENST00000579308	SCARF1	Q14162	830 aa		13.72	□□□□□ -0.21
CSNK1D-210	ENST00000579308	CCDC27	Q2M243	656 aa		13.72	□□□□□ -0.21
CSNK1D-210	ENST00000579308	DCAF8	Q5TAQ9	597 aa		13.72	□□□□□ -0.21
CSNK1D-210	ENST00000579308	PODN	Q7Z5L7	613 aa		13.72	□□□□□ -0.21
CSNK1D-210	ENST00000579308	SULF1	Q8IWU6	871 aa		13.72	□□□□□ -0.21
CSNK1D-210	ENST00000579308	BSDC1	Q9NW68	430 aa	Predicted RBP	13.72	□□□□□ -0.21
CSNK1D-210	ENST00000579308	GGA3	Q9NZ52	723 aa		13.72	□□□□□ -0.21
CSNK1D-210	ENST00000579308	USP17L3	A6NCW0	530 aa		13.71	□□□□□ -0.21
CSNK1D-210	ENST00000579308	USP17L4	A6NCW7	530 aa		13.71	□□□□□ -0.21
CSNK1D-210	ENST00000579308	CCDC85C	A6NKD9	419 aa		13.71	□□□□□ -0.21
CSNK1D-210	ENST00000579308		H7C1W4	665 aa		13.71	□□□□□ -0.21
CSNK1D-210	ENST00000579308	USP17L8	P0C7I0	530 aa		13.71	□□□□□ -0.21
CSNK1D-210	ENST00000579308	KIF23	Q02241	960 aa	Predicted RBP	13.71	□□□□□ -0.21
CSNK1D-210	ENST00000579308	CCDC184	Q52MB2	194 aa		13.71	□□□□□ -0.21
CSNK1D-210	ENST00000579308	USP17L1	Q7RTZ2	530 aa		13.71	□□□□□ -0.21
CSNK1D-210	ENST00000579308	TSR2	Q969E8	191 aa	Known RBP	13.71	□□□□□ -0.21
CSNK1D-210	ENST00000579308	CDCA5	Q96FF9	252 aa		13.71	□□□□□ -0.21
CSNK1D-210	ENST00000579308	CDC5L	Q99459	802 aa	Known RBP	13.71	□□□□□ -0.21
CSNK1D-210	ENST00000579308	MCOLN1	Q9GZU1	580 aa		13.71	□□□□□ -0.21
CSNK1D-210	ENST00000579308	GREM2	Q9H772	168 aa		13.71	□□□□□ -0.21
CSNK1D-210	ENST00000579308	NEURL1B	A8MQ27	555 aa		13.7	□□□□□ -0.22
CSNK1D-210	ENST00000579308	ZNF157	P51786	506 aa	Predicted RBP	13.7	□□□□□ -0.22
CSNK1D-210	ENST00000579308	CWF19L2	Q2TBE0	894 aa	Known RBP	13.7	□□□□□ -0.22
CSNK1D-210	ENST00000579308	ANGEL2	Q5VTE6	544 aa	Known RBP	13.7	□□□□□ -0.22
CSNK1D-210	ENST00000579308	G2E3	Q7L622	706 aa		13.7	□□□□□ -0.22
CSNK1D-210	ENST00000579308	WWC1	Q8IX03	1113 aa		13.7	□□□□□ -0.22
CSNK1D-210	ENST00000579308	MYOZ2	Q9NPC6	264 aa		13.7	□□□□□ -0.22
CSNK1D-210	ENST00000579308	SAGE1	Q9NXZ1	904 aa		13.7	□□□□□ -0.22
CSNK1D-210	ENST00000579308	SLC4A2	P04920	1241 aa		13.69	□□□□□ -0.22
CSNK1D-210	ENST00000579308	SLC10A3	P09131	477 aa		13.69	□□□□□ -0.22
CSNK1D-210	ENST00000579308	FAM161A	Q3B820	660 aa		13.69	□□□□□ -0.22
CSNK1D-210	ENST00000579308	NCBP3	Q53F19	620 aa	Known RBP	13.69	□□□□□ -0.22

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