RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 KCTD15Q96SI1 283 aaPredicted RBP5.28□□□□□ -1.56
SMARCE1-215ENST00000578995 DLG5Q8TDM6 1919 aa5.28□□□□□ -1.56
SMARCE1-215ENST00000578995 CPDO75976 1380 aa5.28□□□□□ -1.56
SMARCE1-215ENST00000578995 NPC1L1Q9UHC9 1359 aa5.28□□□□□ -1.56
SMARCE1-215ENST00000578995 FYB1O15117 783 aa5.27□□□□□ -1.57
SMARCE1-215ENST00000578995 RHOQP17081 205 aa5.27□□□□□ -1.57
SMARCE1-215ENST00000578995 TXKP42681 527 aa5.27□□□□□ -1.57
SMARCE1-215ENST00000578995 NCAPD2Q15021 1401 aa5.27□□□□□ -1.57
SMARCE1-215ENST00000578995 ERFEQ4G0M1 354 aa5.27□□□□□ -1.57
SMARCE1-215ENST00000578995 CDCA8Q53HL2 280 aa5.27□□□□□ -1.57
SMARCE1-215ENST00000578995 AMER1Q5JTC6 1135 aaPredicted RBP5.27□□□□□ -1.57
SMARCE1-215ENST00000578995 NKAPLQ5M9Q1 402 aa5.27□□□□□ -1.57
SMARCE1-215ENST00000578995 C1orf229Q6ZS94 237 aaPredicted RBP5.27□□□□□ -1.57
SMARCE1-215ENST00000578995 NME9Q86XW9 330 aa5.27□□□□□ -1.57
SMARCE1-215ENST00000578995 GOLGA6L1Q8N7Z2 621 aa5.27□□□□□ -1.57
SMARCE1-215ENST00000578995 KRI1Q8N9T8 703 aaKnown RBP5.27□□□□□ -1.57
SMARCE1-215ENST00000578995 NGDNQ8NEJ9 315 aaKnown RBP5.27□□□□□ -1.57
SMARCE1-215ENST00000578995 COL5A2P05997 1499 aaPredicted RBP5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 CFAP99D6REC4 459 aa5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 ADH1AP07327 375 aa5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 HOXB4P17483 251 aaPredicted RBP5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 GJA5P36382 358 aa5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 RNF144AP50876 292 aaPredicted RBP5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 PSME1Q06323 249 aa5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 LRP8Q14114 963 aa5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 CABLES1Q8TDN4 633 aa5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 GPKOWQ92917 476 aaPredicted RBP eCLIP5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 KLRG1Q96E93 195 aa5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 KRTAP4-9Q9BYQ8 210 aa5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 PANK3Q9H999 370 aa5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 RGS17Q9UGC6 210 aaPredicted RBP5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 DYRK1BQ9Y463 629 aa5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 ADAMTS7Q9UKP4 1686 aa5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 NSD2O96028 1365 aa5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 CDK12Q9NYV4 1490 aaPredicted RBP5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 TNS1Q9HBL0 1735 aaKnown RBP5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 TOGARAM1Q9Y4F4 1720 aa5.26□□□□□ -1.57
SMARCE1-215ENST00000578995 ITGB4P16144 1822 aa5.25□□□□□ -1.57
SMARCE1-215ENST00000578995 ATRNO75882 1429 aa5.25□□□□□ -1.57
SMARCE1-215ENST00000578995 SIPA1L3O60292 1781 aaPredicted RBP5.25□□□□□ -1.57
SMARCE1-215ENST00000578995 PAX4O43316 350 aa5.25□□□□□ -1.57
SMARCE1-215ENST00000578995 PTGIRP43119 386 aa5.25□□□□□ -1.57
SMARCE1-215ENST00000578995 TMC1Q8TDI8 760 aa5.25□□□□□ -1.57
SMARCE1-215ENST00000578995 CFHR5Q9BXR6 569 aa5.25□□□□□ -1.57
SMARCE1-215ENST00000578995 TERF2IPQ9NYB0 399 aa5.25□□□□□ -1.57
SMARCE1-215ENST00000578995 AATKQ6ZMQ8 1374 aa5.25□□□□□ -1.57
SMARCE1-215ENST00000578995 PARD3Q8TEW0 1356 aa5.25□□□□□ -1.57
SMARCE1-215ENST00000578995 KIAA0232Q92628 1395 aa5.25□□□□□ -1.57
SMARCE1-215ENST00000578995 SCN11AQ9UI33 1791 aa5.24□□□□□ -1.57
SMARCE1-215ENST00000578995 DYRK3O43781 588 aa5.24□□□□□ -1.57
SMARCE1-215ENST00000578995 HDGFL2Q7Z4V5 671 aaPredicted RBP5.24□□□□□ -1.57
SMARCE1-215ENST00000578995 FNBP4Q8N3X1 1017 aaPredicted RBP5.24□□□□□ -1.57
SMARCE1-215ENST00000578995 SLC10A4Q96EP9 437 aa5.24□□□□□ -1.57
SMARCE1-215ENST00000578995 GAS2L1Q99501 681 aaPredicted RBP5.24□□□□□ -1.57
SMARCE1-215ENST00000578995 DISP2A7MBM2 1401 aa5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 BLMP54132 1417 aaPredicted RBP5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 DOT1LQ8TEK3 1739 aa5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 FAM83GA6ND36 823 aa5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 GCP02774 474 aa5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 FBLN1P23142 703 aa5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 INTS6LQ5JSJ4 861 aaKnown RBP5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 NUTM2GQ5VZR2 741 aa5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 MCTP1Q6DN14 999 aa5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 ARHGEF25Q86VW2 580 aa5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 NLRP13Q86W25 1043 aa5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 ABTB2Q8N961 1025 aa5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 NUCKS1Q9H1E3 243 aaKnown RBP5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 GGNBP2Q9H3C7 697 aa5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 ZBTB3Q9H5J0 574 aa5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 PHF24Q9UPV7 400 aa5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 RTL1A6NKG5 1358 aa5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 KIF24Q5T7B8 1368 aa5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 EP400Q96L91 3159 aa5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 CGNL1Q0VF96 1302 aa5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 MAP3K19Q56UN5 1328 aa5.23□□□□□ -1.57
SMARCE1-215ENST00000578995 RGPD3A6NKT7 1758 aaPredicted RBP5.22□□□□□ -1.57
SMARCE1-215ENST00000578995 RGPD4Q7Z3J3 1758 aa5.22□□□□□ -1.57
SMARCE1-215ENST00000578995 NHSQ6T4R5 1651 aa5.22□□□□□ -1.57
SMARCE1-215ENST00000578995 INSRP06213 1382 aa5.22□□□□□ -1.57
SMARCE1-215ENST00000578995 SSTR3P32745 418 aaPredicted RBP5.22□□□□□ -1.57
SMARCE1-215ENST00000578995 PRSS36Q5K4E3 855 aa5.22□□□□□ -1.57
SMARCE1-215ENST00000578995 KRTAP4-2Q9BYR5 136 aa5.22□□□□□ -1.57
SMARCE1-215ENST00000578995 RGS12O14924 1447 aa5.22□□□□□ -1.57
SMARCE1-215ENST00000578995 AFF2P51816 1311 aa5.22□□□□□ -1.57
SMARCE1-215ENST00000578995 HYAL3O43820 417 aaPredicted RBP5.21□□□□□ -1.58
SMARCE1-215ENST00000578995 DGKGP49619 791 aa5.21□□□□□ -1.58
SMARCE1-215ENST00000578995 GIGYF2Q6Y7W6 1299 aaKnown RBP5.21□□□□□ -1.58
SMARCE1-215ENST00000578995 SLCO4C1Q6ZQN7 724 aa5.21□□□□□ -1.58
SMARCE1-215ENST00000578995 CCDC102AQ96A19 550 aa5.21□□□□□ -1.58
SMARCE1-215ENST00000578995 BTBD6Q96KE9 485 aa5.21□□□□□ -1.58
SMARCE1-215ENST00000578995 TPSG1Q9NRR2 321 aa5.21□□□□□ -1.58
SMARCE1-215ENST00000578995 PAPPAQ13219 1627 aa5.21□□□□□ -1.58
SMARCE1-215ENST00000578995 MEGF6O75095 1541 aa5.21□□□□□ -1.58
SMARCE1-215ENST00000578995 CRB1P82279 1406 aa5.21□□□□□ -1.58
SMARCE1-215ENST00000578995 RREB1Q92766 1687 aa5.21□□□□□ -1.58
SMARCE1-215ENST00000578995 BTAF1O14981 1849 aa5.2□□□□□ -1.58
SMARCE1-215ENST00000578995 TAF1LQ8IZX4 1826 aa5.2□□□□□ -1.58
SMARCE1-215ENST00000578995 LY75O60449 1722 aa5.2□□□□□ -1.58
SMARCE1-215ENST00000578995 FLT4P35916 1363 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms