RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 CALD1Q05682 793 aaKnown RBP11.53□□□□□ -0.56
GGA3-207ENST00000578896 CCDC30Q5VVM6 783 aa11.53□□□□□ -0.56
GGA3-207ENST00000578896 G2E3Q7L622 706 aa11.53□□□□□ -0.56
GGA3-207ENST00000578896 METTL22Q9BUU2 404 aaPredicted RBP11.53□□□□□ -0.56
GGA3-207ENST00000578896 CWC25Q9NXE8 425 aaPredicted RBP11.53□□□□□ -0.56
GGA3-207ENST00000578896 TLL2Q9Y6L7 1015 aa11.53□□□□□ -0.56
GGA3-207ENST00000578896 RTL9Q8NET4 1388 aa11.53□□□□□ -0.56
GGA3-207ENST00000578896 PI4KAP2A4QPH2 592 aa11.52□□□□□ -0.57
GGA3-207ENST00000578896 UFL1O94874 794 aa11.52□□□□□ -0.57
GGA3-207ENST00000578896 IGKV5-2P06315 115 aa11.52□□□□□ -0.57
GGA3-207ENST00000578896 PI4KAP1Q8N8J0 262 aa11.52□□□□□ -0.57
GGA3-207ENST00000578896 CCDC191Q8NCU4 936 aa11.52□□□□□ -0.57
GGA3-207ENST00000578896 PRDM10Q9NQV6 1147 aa11.52□□□□□ -0.57
GGA3-207ENST00000578896 ANKIB1Q9P2G1 1089 aa11.52□□□□□ -0.57
GGA3-207ENST00000578896 PGAP2Q9UHJ9 254 aa11.52□□□□□ -0.57
GGA3-207ENST00000578896 ASTN2O75129 1339 aaPredicted RBP11.52□□□□□ -0.57
GGA3-207ENST00000578896 CASP8AP2Q9UKL3 1982 aa11.51□□□□□ -0.57
GGA3-207ENST00000578896 PDE8AO60658 829 aa11.51□□□□□ -0.57
GGA3-207ENST00000578896 MAP2K1Q02750 393 aaPredicted RBP11.51□□□□□ -0.57
GGA3-207ENST00000578896 CWF19L2Q2TBE0 894 aaKnown RBP11.51□□□□□ -0.57
GGA3-207ENST00000578896 CCDC152Q4G0S7 254 aa11.51□□□□□ -0.57
GGA3-207ENST00000578896 CDC37L1Q7L3B6 337 aa11.51□□□□□ -0.57
GGA3-207ENST00000578896 SAPCD2Q86UD0 394 aa11.51□□□□□ -0.57
GGA3-207ENST00000578896 ZIC5Q96T25 663 aa11.51□□□□□ -0.57
GGA3-207ENST00000578896 EYA3Q99504 573 aa11.51□□□□□ -0.57
GGA3-207ENST00000578896 ZC3H12CQ9C0D7 883 aaKnown RBP11.51□□□□□ -0.57
GGA3-207ENST00000578896 ADM5C9JUS6 153 aa11.5□□□□□ -0.57
GGA3-207ENST00000578896 G3V3G9 751 aa11.5□□□□□ -0.57
GGA3-207ENST00000578896 DDX58O95786 925 aaKnown RBP11.5□□□□□ -0.57
GGA3-207ENST00000578896 ECE1P42892 770 aa11.5□□□□□ -0.57
GGA3-207ENST00000578896 DCAF8Q5TAQ9 597 aa11.5□□□□□ -0.57
GGA3-207ENST00000578896 KSR2Q6VAB6 950 aa11.5□□□□□ -0.57
GGA3-207ENST00000578896 WWC1Q8IX03 1113 aa11.5□□□□□ -0.57
GGA3-207ENST00000578896 ZC3H15Q8WU90 426 aaKnown RBP11.5□□□□□ -0.57
GGA3-207ENST00000578896 DPF2Q92785 391 aa11.5□□□□□ -0.57
GGA3-207ENST00000578896 GGA1Q9UJY5 639 aa11.5□□□□□ -0.57
GGA3-207ENST00000578896 CDHR2Q9BYE9 1310 aa11.5□□□□□ -0.57
GGA3-207ENST00000578896 SPEF2Q9C093 1822 aa11.49□□□□□ -0.57
GGA3-207ENST00000578896 SLC4A2P04920 1241 aa11.49□□□□□ -0.57
GGA3-207ENST00000578896 TWISTNBQ3B726 338 aaPredicted RBP11.49□□□□□ -0.57
GGA3-207ENST00000578896 ANKRD18AQ8IVF6 992 aa11.49□□□□□ -0.57
GGA3-207ENST00000578896 GREM2Q9H772 168 aa11.49□□□□□ -0.57
GGA3-207ENST00000578896 PODXL2Q9NZ53 605 aa11.49□□□□□ -0.57
GGA3-207ENST00000578896 SCAF8Q9UPN6 1271 aaKnown RBP11.49□□□□□ -0.57
GGA3-207ENST00000578896 VIL1P09327 827 aaKnown RBP11.48□□□□□ -0.57
GGA3-207ENST00000578896 CTSWP56202 376 aa11.48□□□□□ -0.57
GGA3-207ENST00000578896 KRT26Q7Z3Y9 468 aa11.48□□□□□ -0.57
GGA3-207ENST00000578896 TTLL11Q8NHH1 800 aa11.48□□□□□ -0.57
GGA3-207ENST00000578896 MXD3Q9BW11 206 aa11.48□□□□□ -0.57
GGA3-207ENST00000578896 STK31Q9BXU1 1019 aa11.48□□□□□ -0.57
GGA3-207ENST00000578896 MRS2Q9HD23 443 aa11.48□□□□□ -0.57
GGA3-207ENST00000578896 MYH3P11055 1940 aa11.47□□□□□ -0.57
GGA3-207ENST00000578896 NEURL1BA8MQ27 555 aa11.47□□□□□ -0.57
GGA3-207ENST00000578896 HSP90B1P14625 803 aaKnown RBP11.47□□□□□ -0.57
GGA3-207ENST00000578896 HUNKP57058 714 aa11.47□□□□□ -0.57
GGA3-207ENST00000578896 KIF4BQ2VIQ3 1234 aa11.47□□□□□ -0.57
GGA3-207ENST00000578896 UBE3BQ7Z3V4 1068 aa11.47□□□□□ -0.57
GGA3-207ENST00000578896 BEGAINQ9BUH8 593 aa11.47□□□□□ -0.57
GGA3-207ENST00000578896 MINPP1Q9UNW1 487 aa11.47□□□□□ -0.57
GGA3-207ENST00000578896 XDHP47989 1333 aa11.46□□□□□ -0.57
GGA3-207ENST00000578896 H7C1W4 665 aa11.46□□□□□ -0.57
GGA3-207ENST00000578896 ATP2B4P23634 1241 aa11.46□□□□□ -0.57
GGA3-207ENST00000578896 RPS12P25398 132 aaKnown RBP11.46□□□□□ -0.57
GGA3-207ENST00000578896 NEXNQ0ZGT2 675 aa11.46□□□□□ -0.57
GGA3-207ENST00000578896 CCDC27Q2M243 656 aa11.46□□□□□ -0.57
GGA3-207ENST00000578896 RSBN1LQ6PCB5 846 aaPredicted RBP11.46□□□□□ -0.57
GGA3-207ENST00000578896 TXNRD3Q86VQ6 643 aa11.46□□□□□ -0.57
GGA3-207ENST00000578896 DCPSQ96C86 337 aaKnown RBP11.46□□□□□ -0.57
GGA3-207ENST00000578896 GGA3Q9NZ52 723 aa11.46□□□□□ -0.57
GGA3-207ENST00000578896 FANCIQ9NVI1 1328 aa11.45□□□□□ -0.58
GGA3-207ENST00000578896 KLRK1P26718 216 aa11.45□□□□□ -0.58
GGA3-207ENST00000578896 MAP2K2P36507 400 aa11.45□□□□□ -0.58
GGA3-207ENST00000578896 EXOSC9Q06265 439 aaKnown RBP11.45□□□□□ -0.58
GGA3-207ENST00000578896 FLIIQ13045 1269 aa11.45□□□□□ -0.58
GGA3-207ENST00000578896 SCARF1Q14162 830 aa11.45□□□□□ -0.58
GGA3-207ENST00000578896 FBXW7Q969H0 707 aa11.45□□□□□ -0.58
GGA3-207ENST00000578896 ABHD8Q96I13 439 aa11.45□□□□□ -0.58
GGA3-207ENST00000578896 CDC5LQ99459 802 aaKnown RBP11.45□□□□□ -0.58
GGA3-207ENST00000578896 GBA2Q9HCG7 927 aaPredicted RBP11.45□□□□□ -0.58
GGA3-207ENST00000578896 SPINK5Q9NQ38 1064 aaPredicted RBP11.45□□□□□ -0.58
GGA3-207ENST00000578896 THSD7BQ9C0I4 1608 aa11.45□□□□□ -0.58
GGA3-207ENST00000578896 F6X3S4 739 aa11.44□□□□□ -0.58
GGA3-207ENST00000578896 SNAP23O00161 211 aa11.44□□□□□ -0.58
GGA3-207ENST00000578896 VAMP4O75379 141 aa11.44□□□□□ -0.58
GGA3-207ENST00000578896 CCT4P50991 539 aaKnown RBP11.44□□□□□ -0.58
GGA3-207ENST00000578896 FKBP5Q13451 457 aaPredicted RBP11.44□□□□□ -0.58
GGA3-207ENST00000578896 GCKRQ14397 625 aa11.44□□□□□ -0.58
GGA3-207ENST00000578896 FAM161AQ3B820 660 aa11.44□□□□□ -0.58
GGA3-207ENST00000578896 ANGEL2Q5VTE6 544 aaKnown RBP11.44□□□□□ -0.58
GGA3-207ENST00000578896 PRAMEF18Q5VWM3 479 aa11.44□□□□□ -0.58
GGA3-207ENST00000578896 CDCA5Q96FF9 252 aa11.44□□□□□ -0.58
GGA3-207ENST00000578896 GMLQ99445 158 aa11.44□□□□□ -0.58
GGA3-207ENST00000578896 CHMP4AQ9BY43 222 aa11.44□□□□□ -0.58
GGA3-207ENST00000578896 BSDC1Q9NW68 430 aaPredicted RBP11.44□□□□□ -0.58
GGA3-207ENST00000578896 PSME4Q14997 1843 aa11.44□□□□□ -0.58
GGA3-207ENST00000578896 USP17L3A6NCW0 530 aa11.43□□□□□ -0.58
GGA3-207ENST00000578896 USP17L4A6NCW7 530 aa11.43□□□□□ -0.58
GGA3-207ENST00000578896 ANP32CO43423 234 aa11.43□□□□□ -0.58
GGA3-207ENST00000578896 USP17L8P0C7I0 530 aa11.43□□□□□ -0.58
GGA3-207ENST00000578896 ITGA6P23229 1130 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms