RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 KRT26Q7Z3Y9 468 aa27.26■■□□□ 1.95
TSEN54-205ENST00000578415 NOGQ13253 232 aa27.25■■□□□ 1.95
TSEN54-205ENST00000578415 ZBTB38Q8NAP3 1195 aaPredicted RBP27.25■■□□□ 1.95
TSEN54-205ENST00000578415 SEC31BQ9NQW1 1179 aa27.25■■□□□ 1.95
TSEN54-205ENST00000578415 ADM5C9JUS6 153 aa27.24■■□□□ 1.95
TSEN54-205ENST00000578415 RIC3Q7Z5B4 369 aa27.24■■□□□ 1.95
TSEN54-205ENST00000578415 PHAXQ9H814 394 aaKnown RBP27.24■■□□□ 1.95
TSEN54-205ENST00000578415 PODXL2Q9NZ53 605 aa27.24■■□□□ 1.95
TSEN54-205ENST00000578415 GOLGA2Q08379 1002 aa27.23■■□□□ 1.95
TSEN54-205ENST00000578415 RBM26Q5T8P6 1007 aaKnown RBP27.23■■□□□ 1.95
TSEN54-205ENST00000578415 MCOLN1Q9GZU1 580 aa27.22■■□□□ 1.95
TSEN54-205ENST00000578415 GBA2Q9HCG7 927 aaPredicted RBP27.22■■□□□ 1.95
TSEN54-205ENST00000578415 FAM155AB1AL88 458 aaPredicted RBP27.21■■□□□ 1.95
TSEN54-205ENST00000578415 VIL1P09327 827 aaKnown RBP27.21■■□□□ 1.95
TSEN54-205ENST00000578415 KIF4BQ2VIQ3 1234 aa27.21■■□□□ 1.95
TSEN54-205ENST00000578415 DCPSQ96C86 337 aaKnown RBP27.21■■□□□ 1.95
TSEN54-205ENST00000578415 ZC3H12CQ9C0D7 883 aaKnown RBP27.21■■□□□ 1.95
TSEN54-205ENST00000578415 UFL1O94874 794 aa27.2■■□□□ 1.94
TSEN54-205ENST00000578415 RGS19P49795 217 aa27.2■■□□□ 1.94
TSEN54-205ENST00000578415 RGMBQ6NW40 437 aa27.2■■□□□ 1.94
TSEN54-205ENST00000578415 MYD88Q99836 296 aa27.2■■□□□ 1.94
TSEN54-205ENST00000578415 IFT57Q9NWB7 429 aa27.2■■□□□ 1.94
TSEN54-205ENST00000578415 SCN9AQ15858 1988 aa27.19■■□□□ 1.94
TSEN54-205ENST00000578415 ELL2O00472 640 aaPredicted RBP27.19■■□□□ 1.94
TSEN54-205ENST00000578415 ASTN2O75129 1339 aaPredicted RBP27.18■■□□□ 1.94
TSEN54-205ENST00000578415 PCCAP05165 728 aaPredicted RBP27.18■■□□□ 1.94
TSEN54-205ENST00000578415 C2orf69Q8N8R5 385 aa27.18■■□□□ 1.94
TSEN54-205ENST00000578415 CCDC191Q8NCU4 936 aa27.18■■□□□ 1.94
TSEN54-205ENST00000578415 GGA3Q9NZ52 723 aa27.18■■□□□ 1.94
TSEN54-205ENST00000578415 ANKIB1Q9P2G1 1089 aa27.18■■□□□ 1.94
TSEN54-205ENST00000578415 GGA1Q9UJY5 639 aa27.18■■□□□ 1.94
TSEN54-205ENST00000578415 HSP90B1P14625 803 aaKnown RBP27.17■■□□□ 1.94
TSEN54-205ENST00000578415 CCDC152Q4G0S7 254 aa27.17■■□□□ 1.94
TSEN54-205ENST00000578415 JARID2Q92833 1246 aaPredicted RBP27.17■■□□□ 1.94
TSEN54-205ENST00000578415 APAF1O14727 1248 aa27.16■■□□□ 1.94
TSEN54-205ENST00000578415 CCDC85AQ96PX6 553 aaPredicted RBP27.16■■□□□ 1.94
TSEN54-205ENST00000578415 CASP8AP2Q9UKL3 1982 aa27.16■■□□□ 1.94
TSEN54-205ENST00000578415 ZNF609O15014 1411 aa27.16■■□□□ 1.94
TSEN54-205ENST00000578415 PDE8AO60658 829 aa27.15■■□□□ 1.94
TSEN54-205ENST00000578415 ZNF280AP59817 542 aaPredicted RBP27.15■■□□□ 1.94
TSEN54-205ENST00000578415 GNAI1P63096 354 aa27.15■■□□□ 1.94
TSEN54-205ENST00000578415 MLLT1Q03111 559 aaPredicted RBP27.15■■□□□ 1.94
TSEN54-205ENST00000578415 DGKZQ13574 1117 aa27.15■■□□□ 1.94
TSEN54-205ENST00000578415 SULF1Q8IWU6 871 aa27.15■■□□□ 1.94
TSEN54-205ENST00000578415 C8orf58Q8NAV2 365 aa27.15■■□□□ 1.94
TSEN54-205ENST00000578415 CCDC102AQ96A19 550 aa27.15■■□□□ 1.94
TSEN54-205ENST00000578415 CWC25Q9NXE8 425 aaPredicted RBP27.15■■□□□ 1.94
TSEN54-205ENST00000578415 RSBN1LQ6PCB5 846 aaPredicted RBP27.14■■□□□ 1.94
TSEN54-205ENST00000578415 METTL22Q9BUU2 404 aaPredicted RBP27.14■■□□□ 1.94
TSEN54-205ENST00000578415 PRKRIP1Q9H875 184 aaPredicted RBP27.14■■□□□ 1.94
TSEN54-205ENST00000578415 G3V3G9 751 aa27.13■■□□□ 1.93
TSEN54-205ENST00000578415 ZNF157P51786 506 aaPredicted RBP27.13■■□□□ 1.93
TSEN54-205ENST00000578415 KIF23Q02241 960 aaPredicted RBP27.13■■□□□ 1.93
TSEN54-205ENST00000578415 DCAF8Q5TAQ9 597 aa27.13■■□□□ 1.93
TSEN54-205ENST00000578415 POLR2AP24928 1970 aaKnown RBP27.13■■□□□ 1.93
TSEN54-205ENST00000578415 CALD1Q05682 793 aaKnown RBP27.12■■□□□ 1.93
TSEN54-205ENST00000578415 AGBL3Q8NEM8 1001 aa27.12■■□□□ 1.93
TSEN54-205ENST00000578415 CDCA5Q96FF9 252 aa27.12■■□□□ 1.93
TSEN54-205ENST00000578415 GMLQ99445 158 aa27.12■■□□□ 1.93
TSEN54-205ENST00000578415 SAGE1Q9NXZ1 904 aa27.12■■□□□ 1.93
TSEN54-205ENST00000578415 XDHP47989 1333 aa27.12■■□□□ 1.93
TSEN54-205ENST00000578415 ANGEL2Q5VTE6 544 aaKnown RBP27.11■■□□□ 1.93
TSEN54-205ENST00000578415 SLC10A3P09131 477 aa27.1■■□□□ 1.93
TSEN54-205ENST00000578415 SCARF1Q14162 830 aa27.1■■□□□ 1.93
TSEN54-205ENST00000578415 ANKRD18AQ8IVF6 992 aa27.1■■□□□ 1.93
TSEN54-205ENST00000578415 WTIPA6NIX2 430 aaPredicted RBP27.08■■□□□ 1.93
TSEN54-205ENST00000578415 DDX58O95786 925 aaKnown RBP27.08■■□□□ 1.93
TSEN54-205ENST00000578415 CCDC30Q5VVM6 783 aa27.08■■□□□ 1.93
TSEN54-205ENST00000578415 RNF186Q9NXI6 227 aa27.08■■□□□ 1.93
TSEN54-205ENST00000578415 MAP3K2Q9Y2U5 619 aa27.08■■□□□ 1.93
TSEN54-205ENST00000578415 IGKV5-2P06315 115 aa27.07■■□□□ 1.92
TSEN54-205ENST00000578415 ATP2B4P23634 1241 aa27.07■■□□□ 1.92
TSEN54-205ENST00000578415 CTSWP56202 376 aa27.07■■□□□ 1.92
TSEN54-205ENST00000578415 TSPYL6Q8N831 410 aa27.07■■□□□ 1.92
TSEN54-205ENST00000578415 MYOZ2Q9NPC6 264 aa27.07■■□□□ 1.92
TSEN54-205ENST00000578415 USP17L3A6NCW0 530 aa27.06■■□□□ 1.92
TSEN54-205ENST00000578415 USP17L4A6NCW7 530 aa27.06■■□□□ 1.92
TSEN54-205ENST00000578415 TRPA1O75762 1119 aa27.06■■□□□ 1.92
TSEN54-205ENST00000578415 USP17L8P0C7I0 530 aa27.06■■□□□ 1.92
TSEN54-205ENST00000578415 USP17L1Q7RTZ2 530 aa27.06■■□□□ 1.92
TSEN54-205ENST00000578415 PODNQ7Z5L7 613 aa27.06■■□□□ 1.92
TSEN54-205ENST00000578415 CSRNP1Q96S65 589 aa27.06■■□□□ 1.92
TSEN54-205ENST00000578415 RASAL3Q86YV0 1011 aa27.05■■□□□ 1.92
TSEN54-205ENST00000578415 CDC5LQ99459 802 aaKnown RBP27.05■■□□□ 1.92
TSEN54-205ENST00000578415 PSME4Q14997 1843 aa27.04■■□□□ 1.92
TSEN54-205ENST00000578415 PI4KAP2A4QPH2 592 aa27.04■■□□□ 1.92
TSEN54-205ENST00000578415 SLC34A2O95436 690 aa27.04■■□□□ 1.92
TSEN54-205ENST00000578415 KSR2Q6VAB6 950 aa27.04■■□□□ 1.92
TSEN54-205ENST00000578415 PI4KAP1Q8N8J0 262 aa27.04■■□□□ 1.92
TSEN54-205ENST00000578415 TTLL11Q8NHH1 800 aa27.04■■□□□ 1.92
TSEN54-205ENST00000578415 PITPNM2Q9BZ72 1349 aa27.04■■□□□ 1.92
TSEN54-205ENST00000578415 GREM2Q9H772 168 aa27.03■■□□□ 1.92
TSEN54-205ENST00000578415 BSDC1Q9NW68 430 aaPredicted RBP27.03■■□□□ 1.92
TSEN54-205ENST00000578415 MINPP1Q9UNW1 487 aa27.03■■□□□ 1.92
TSEN54-205ENST00000578415 MED23Q9ULK4 1368 aa27.02■■□□□ 1.92
TSEN54-205ENST00000578415 FKBP1BP68106 108 aa27.02■■□□□ 1.92
TSEN54-205ENST00000578415 CHMP4AQ9BY43 222 aa27.02■■□□□ 1.92
TSEN54-205ENST00000578415 SCAF8Q9UPN6 1271 aaKnown RBP27.02■■□□□ 1.92
TSEN54-205ENST00000578415 PAPPA2Q9BXP8 1791 aa27■■□□□ 1.91
TSEN54-205ENST00000578415 CWF19L2Q2TBE0 894 aaKnown RBP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms