RNA–Protein interactions for RNA: ENST00000578315.1

UPF3AP2-202, Transcript of UPF3A pseudogene 2, humanhuman

TSL 5 BASIC

Gene UPF3AP2, Length 730 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-202ENST00000578315 TBC1D16Q8TBP0 767 aa17.74■□□□□ 0.43
UPF3AP2-202ENST00000578315 EYA3Q99504 573 aa17.74■□□□□ 0.43
UPF3AP2-202ENST00000578315 IRS4O14654 1257 aaPredicted RBP17.73■□□□□ 0.43
UPF3AP2-202ENST00000578315 TRPA1O75762 1119 aa17.73■□□□□ 0.43
UPF3AP2-202ENST00000578315 RPS12P25398 132 aaKnown RBP17.73■□□□□ 0.43
UPF3AP2-202ENST00000578315 KIF4BQ2VIQ3 1234 aa17.73■□□□□ 0.43
UPF3AP2-202ENST00000578315 CCDC102AQ96A19 550 aa17.73■□□□□ 0.43
UPF3AP2-202ENST00000578315 G3V3G9 751 aa17.72■□□□□ 0.43
UPF3AP2-202ENST00000578315 RPS8P62241 208 aaKnown RBP17.72■□□□□ 0.43
UPF3AP2-202ENST00000578315 DCAF8Q5TAQ9 597 aa17.72■□□□□ 0.43
UPF3AP2-202ENST00000578315 ZC3H12CQ9C0D7 883 aaKnown RBP17.72■□□□□ 0.43
UPF3AP2-202ENST00000578315 SEC31BQ9NQW1 1179 aa17.72■□□□□ 0.43
UPF3AP2-202ENST00000578315 RNF186Q9NXI6 227 aa17.72■□□□□ 0.43
UPF3AP2-202ENST00000578315 GGA3Q9NZ52 723 aa17.72■□□□□ 0.43
UPF3AP2-202ENST00000578315 DBF4Q9UBU7 674 aaPredicted RBP17.72■□□□□ 0.43
UPF3AP2-202ENST00000578315 TRIM35Q9UPQ4 493 aa17.72■□□□□ 0.43
UPF3AP2-202ENST00000578315 TNRC18O15417 2968 aaPredicted RBP17.71■□□□□ 0.43
UPF3AP2-202ENST00000578315 SOX10P56693 466 aa17.71■□□□□ 0.43
UPF3AP2-202ENST00000578315 SULF1Q8IWU6 871 aa17.71■□□□□ 0.43
UPF3AP2-202ENST00000578315 UFL1O94874 794 aa17.7■□□□□ 0.42
UPF3AP2-202ENST00000578315 CDCA5Q96FF9 252 aa17.7■□□□□ 0.42
UPF3AP2-202ENST00000578315 SAGE1Q9NXZ1 904 aa17.7■□□□□ 0.42
UPF3AP2-202ENST00000578315 ANKIB1Q9P2G1 1089 aa17.7■□□□□ 0.42
UPF3AP2-202ENST00000578315 SCN9AQ15858 1988 aa17.7■□□□□ 0.42
UPF3AP2-202ENST00000578315 VIL1P09327 827 aaKnown RBP17.69■□□□□ 0.42
UPF3AP2-202ENST00000578315 RALBP1Q15311 655 aa17.69■□□□□ 0.42
UPF3AP2-202ENST00000578315 ANGEL2Q5VTE6 544 aaKnown RBP17.69■□□□□ 0.42
UPF3AP2-202ENST00000578315 DUSP27Q5VZP5 1158 aa17.69■□□□□ 0.42
UPF3AP2-202ENST00000578315 JARID2Q92833 1246 aaPredicted RBP17.69■□□□□ 0.42
UPF3AP2-202ENST00000578315 CCDC85AQ96PX6 553 aaPredicted RBP17.69■□□□□ 0.42
UPF3AP2-202ENST00000578315 CSRNP1Q96S65 589 aa17.69■□□□□ 0.42
UPF3AP2-202ENST00000578315 HYPKQ9NX55 129 aa17.69■□□□□ 0.42
UPF3AP2-202ENST00000578315 SLC10A3P09131 477 aa17.68■□□□□ 0.42
UPF3AP2-202ENST00000578315 SCARF1Q14162 830 aa17.68■□□□□ 0.42
UPF3AP2-202ENST00000578315 RIC3Q7Z5B4 369 aa17.68■□□□□ 0.42
UPF3AP2-202ENST00000578315 RUNDC1Q96C34 613 aa17.68■□□□□ 0.42
UPF3AP2-202ENST00000578315 GGA1Q9UJY5 639 aa17.68■□□□□ 0.42
UPF3AP2-202ENST00000578315 SCAF8Q9UPN6 1271 aaKnown RBP17.68■□□□□ 0.42
UPF3AP2-202ENST00000578315 HOXB7P09629 217 aa17.67■□□□□ 0.42
UPF3AP2-202ENST00000578315 TRIM28Q13263 835 aaKnown RBP17.67■□□□□ 0.42
UPF3AP2-202ENST00000578315 PHAXQ9H814 394 aaKnown RBP17.67■□□□□ 0.42
UPF3AP2-202ENST00000578315 PODXL2Q9NZ53 605 aa17.67■□□□□ 0.42
UPF3AP2-202ENST00000578315 RSBN1LQ6PCB5 846 aaPredicted RBP17.66■□□□□ 0.42
UPF3AP2-202ENST00000578315 ZBTB38Q8NAP3 1195 aaPredicted RBP17.66■□□□□ 0.42
UPF3AP2-202ENST00000578315 MYD88Q99836 296 aa17.66■□□□□ 0.42
UPF3AP2-202ENST00000578315 AKAP11Q9UKA4 1901 aa17.66■□□□□ 0.42
UPF3AP2-202ENST00000578315 ELL2O00472 640 aaPredicted RBP17.65■□□□□ 0.42
UPF3AP2-202ENST00000578315 ZNF280AP59817 542 aaPredicted RBP17.65■□□□□ 0.42
UPF3AP2-202ENST00000578315 GOLGA2Q08379 1002 aa17.65■□□□□ 0.42
UPF3AP2-202ENST00000578315 WDR43Q15061 677 aaKnown RBP eCLIP17.65■□□□□ 0.42
UPF3AP2-202ENST00000578315 MOB2Q70IA6 237 aa17.65■□□□□ 0.42
UPF3AP2-202ENST00000578315 RASAL3Q86YV0 1011 aa17.65■□□□□ 0.42
UPF3AP2-202ENST00000578315 MBIPQ9NS73 344 aa17.65■□□□□ 0.42
UPF3AP2-202ENST00000578315 CCDC152Q4G0S7 254 aa17.64■□□□□ 0.41
UPF3AP2-202ENST00000578315 ADAMTS8Q9UP79 889 aa17.64■□□□□ 0.41
UPF3AP2-202ENST00000578315 PRAMEF18Q5VWM3 479 aa17.63■□□□□ 0.41
UPF3AP2-202ENST00000578315 CTU1Q7Z7A3 348 aaKnown RBP17.63■□□□□ 0.41
UPF3AP2-202ENST00000578315 AGBL3Q8NEM8 1001 aa17.63■□□□□ 0.41
UPF3AP2-202ENST00000578315 MYOZ2Q9NPC6 264 aa17.63■□□□□ 0.41
UPF3AP2-202ENST00000578315 MYBBP1AQ9BQG0 1328 aaKnown RBP17.63■□□□□ 0.41
UPF3AP2-202ENST00000578315 WTIPA6NIX2 430 aaPredicted RBP17.62■□□□□ 0.41
UPF3AP2-202ENST00000578315 UBE2Q2LH0YL09 131 aa17.62■□□□□ 0.41
UPF3AP2-202ENST00000578315 PDE8AO60658 829 aa17.62■□□□□ 0.41
UPF3AP2-202ENST00000578315 USP17L8P0C7I0 530 aa17.62■□□□□ 0.41
UPF3AP2-202ENST00000578315 PCCAP05165 728 aaPredicted RBP17.61■□□□□ 0.41
UPF3AP2-202ENST00000578315 HSP90B1P14625 803 aaKnown RBP17.61■□□□□ 0.41
UPF3AP2-202ENST00000578315 ANKRD18AQ8IVF6 992 aa17.61■□□□□ 0.41
UPF3AP2-202ENST00000578315 GMLQ99445 158 aa17.61■□□□□ 0.41
UPF3AP2-202ENST00000578315 MXD3Q9BW11 206 aa17.61■□□□□ 0.41
UPF3AP2-202ENST00000578315 XDHP47989 1333 aa17.61■□□□□ 0.41
UPF3AP2-202ENST00000578315 USP17L3A6NCW0 530 aa17.6■□□□□ 0.41
UPF3AP2-202ENST00000578315 USP17L4A6NCW7 530 aa17.6■□□□□ 0.41
UPF3AP2-202ENST00000578315 TBC1D8O95759 1140 aa17.6■□□□□ 0.41
UPF3AP2-202ENST00000578315 DDX10Q13206 875 aaKnown RBP17.6■□□□□ 0.41
UPF3AP2-202ENST00000578315 NBPF9Q3BBW0 867 aa17.6■□□□□ 0.41
UPF3AP2-202ENST00000578315 USP17L1Q7RTZ2 530 aa17.6■□□□□ 0.41
UPF3AP2-202ENST00000578315 CCDC191Q8NCU4 936 aa17.6■□□□□ 0.41
UPF3AP2-202ENST00000578315 FBXW7Q969H0 707 aa17.6■□□□□ 0.41
UPF3AP2-202ENST00000578315 CWC25Q9NXE8 425 aaPredicted RBP17.6■□□□□ 0.41
UPF3AP2-202ENST00000578315 PAPPA2Q9BXP8 1791 aa17.59■□□□□ 0.41
UPF3AP2-202ENST00000578315 FKBP1BP68106 108 aa17.59■□□□□ 0.41
UPF3AP2-202ENST00000578315 MKRN3Q13064 507 aaKnown RBP17.59■□□□□ 0.41
UPF3AP2-202ENST00000578315 TTLL12Q14166 644 aaPredicted RBP17.59■□□□□ 0.41
UPF3AP2-202ENST00000578315 REM2Q8IYK8 340 aaPredicted RBP17.59■□□□□ 0.41
UPF3AP2-202ENST00000578315 HPS5Q9UPZ3 1129 aa17.59■□□□□ 0.41
UPF3AP2-202ENST00000578315 PSME4Q14997 1843 aa17.58■□□□□ 0.41
UPF3AP2-202ENST00000578315 ZNF609O15014 1411 aa17.58■□□□□ 0.41
UPF3AP2-202ENST00000578315 PITPNM2Q9BZ72 1349 aa17.58■□□□□ 0.4
UPF3AP2-202ENST00000578315 ATP2B4P23634 1241 aa17.58■□□□□ 0.4
UPF3AP2-202ENST00000578315 PODNQ7Z5L7 613 aa17.58■□□□□ 0.4
UPF3AP2-202ENST00000578315 HDAC9Q9UKV0 1011 aa17.58■□□□□ 0.4
UPF3AP2-202ENST00000578315 ZNF853P0CG23 659 aa17.57■□□□□ 0.4
UPF3AP2-202ENST00000578315 C8orf58Q8NAV2 365 aa17.57■□□□□ 0.4
UPF3AP2-202ENST00000578315 ZNF296Q8WUU4 475 aaPredicted RBP17.57■□□□□ 0.4
UPF3AP2-202ENST00000578315 METTL22Q9BUU2 404 aaPredicted RBP17.57■□□□□ 0.4
UPF3AP2-202ENST00000578315 PCDH10Q9P2E7 1040 aa17.56■□□□□ 0.4
UPF3AP2-202ENST00000578315 MAP3K2Q9Y2U5 619 aa17.56■□□□□ 0.4
UPF3AP2-202ENST00000578315 SPEF2Q9C093 1822 aa17.56■□□□□ 0.4
UPF3AP2-202ENST00000578315 PDE4DIPQ5VU43 2346 aa17.55■□□□□ 0.4
UPF3AP2-202ENST00000578315 APAF1O14727 1248 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms