RNA–Protein interactions for RNA: ENST00000578218.5

THRA-208, Transcript of thyroid hormone receptor alpha, human

TSL 4

Gene THRA, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
THRA-208	ENST00000578218	AOC2	O75106	756 aa		32.19	■■■□□ 2.74
THRA-208	ENST00000578218	UFL1	O94874	794 aa		32.19	■■■□□ 2.74
THRA-208	ENST00000578218	RPS12	P25398	132 aa	Known RBP	32.19	■■■□□ 2.74
THRA-208	ENST00000578218	CCDC30	Q5VVM6	783 aa		32.19	■■■□□ 2.74
THRA-208	ENST00000578218	C8orf58	Q8NAV2	365 aa		32.19	■■■□□ 2.74
THRA-208	ENST00000578218	CHMP4A	Q9BY43	222 aa		32.19	■■■□□ 2.74
THRA-208	ENST00000578218	MYH3	P11055	1940 aa		32.19	■■■□□ 2.74
THRA-208	ENST00000578218	RTL9	Q8NET4	1388 aa		32.19	■■■□□ 2.74
THRA-208	ENST00000578218	PCCA	P05165	728 aa	Predicted RBP	32.18	■■■□□ 2.74
THRA-208	ENST00000578218	SAMD7	Q7Z3H4	446 aa		32.18	■■■□□ 2.74
THRA-208	ENST00000578218	ANKIB1	Q9P2G1	1089 aa		32.18	■■■□□ 2.74
THRA-208	ENST00000578218	PSME4	Q14997	1843 aa		32.17	■■■□□ 2.74
THRA-208	ENST00000578218		G3V3G9	751 aa		32.17	■■■□□ 2.74
THRA-208	ENST00000578218	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	32.17	■■■□□ 2.74
THRA-208	ENST00000578218	DCAF8	Q5TAQ9	597 aa		32.17	■■■□□ 2.74
THRA-208	ENST00000578218	ZC3H12C	Q9C0D7	883 aa	Known RBP	32.17	■■■□□ 2.74
THRA-208	ENST00000578218	PDE8A	O60658	829 aa		32.16	■■■□□ 2.74
THRA-208	ENST00000578218	MAP2K2	P36507	400 aa		32.16	■■■□□ 2.74
THRA-208	ENST00000578218	HHIPL1	Q96JK4	782 aa		32.16	■■■□□ 2.74
THRA-208	ENST00000578218	CCDC85A	Q96PX6	553 aa	Predicted RBP	32.16	■■■□□ 2.74
THRA-208	ENST00000578218	METTL22	Q9BUU2	404 aa	Predicted RBP	32.16	■■■□□ 2.74
THRA-208	ENST00000578218	GGA1	Q9UJY5	639 aa		32.16	■■■□□ 2.74
THRA-208	ENST00000578218	USP48	Q86UV5	1035 aa		32.15	■■■□□ 2.74
THRA-208	ENST00000578218	PODXL2	Q9NZ53	605 aa		32.15	■■■□□ 2.74
THRA-208	ENST00000578218	JARID2	Q92833	1246 aa	Predicted RBP	32.14	■■■□□ 2.74
THRA-208	ENST00000578218	KCNQ5	Q9NR82	932 aa		32.13	■■■□□ 2.73
THRA-208	ENST00000578218	MAP3K2	Q9Y2U5	619 aa		32.13	■■■□□ 2.73
THRA-208	ENST00000578218	EGFR	P00533	1210 aa		32.12	■■■□□ 2.73
THRA-208	ENST00000578218	RBM26	Q5T8P6	1007 aa	Known RBP	32.12	■■■□□ 2.73
THRA-208	ENST00000578218	KRT26	Q7Z3Y9	468 aa		32.12	■■■□□ 2.73
THRA-208	ENST00000578218	TSKS	Q9UJT2	592 aa		32.12	■■■□□ 2.73
THRA-208	ENST00000578218	POLR2A	P24928	1970 aa	Known RBP	32.12	■■■□□ 2.73
THRA-208	ENST00000578218	KIF4B	Q2VIQ3	1234 aa		32.11	■■■□□ 2.73
THRA-208	ENST00000578218	ANKRD18A	Q8IVF6	992 aa		32.11	■■■□□ 2.73
THRA-208	ENST00000578218	TSPYL6	Q8N831	410 aa		32.11	■■■□□ 2.73
THRA-208	ENST00000578218	TSR2	Q969E8	191 aa	Known RBP	32.11	■■■□□ 2.73
THRA-208	ENST00000578218	DCPS	Q96C86	337 aa	Known RBP	32.11	■■■□□ 2.73
THRA-208	ENST00000578218	STK31	Q9BXU1	1019 aa		32.11	■■■□□ 2.73
THRA-208	ENST00000578218	XDH	P47989	1333 aa		32.09	■■■□□ 2.73
THRA-208	ENST00000578218	HUNK	P57058	714 aa		32.09	■■■□□ 2.73
THRA-208	ENST00000578218	ADM5	C9JUS6	153 aa		32.08	■■■□□ 2.73
THRA-208	ENST00000578218	CA12	O43570	354 aa		32.08	■■■□□ 2.73
THRA-208	ENST00000578218	BRPF1	P55201	1214 aa	Predicted RBP	32.08	■■■□□ 2.73
THRA-208	ENST00000578218	CTSW	P56202	376 aa		32.08	■■■□□ 2.73
THRA-208	ENST00000578218	NEXN	Q0ZGT2	675 aa		32.08	■■■□□ 2.73
THRA-208	ENST00000578218	ABHD8	Q96I13	439 aa		32.08	■■■□□ 2.73
THRA-208	ENST00000578218	DLK2	Q6UY11	383 aa		32.07	■■■□□ 2.72
THRA-208	ENST00000578218	KSR2	Q6VAB6	950 aa		32.07	■■■□□ 2.72
THRA-208	ENST00000578218	CDC5L	Q99459	802 aa	Known RBP	32.07	■■■□□ 2.72
THRA-208	ENST00000578218	GGA3	Q9NZ52	723 aa		32.07	■■■□□ 2.72
THRA-208	ENST00000578218	PI4KAP2	A4QPH2	592 aa		32.06	■■■□□ 2.72
THRA-208	ENST00000578218	VIL1	P09327	827 aa	Known RBP	32.06	■■■□□ 2.72
THRA-208	ENST00000578218	PI4KAP1	Q8N8J0	262 aa		32.06	■■■□□ 2.72
THRA-208	ENST00000578218	ZNF609	O15014	1411 aa		32.06	■■■□□ 2.72
THRA-208	ENST00000578218	NOG	Q13253	232 aa		32.05	■■■□□ 2.72
THRA-208	ENST00000578218	SULF1	Q8IWU6	871 aa		32.04	■■■□□ 2.72
THRA-208	ENST00000578218	GBA2	Q9HCG7	927 aa	Predicted RBP	32.04	■■■□□ 2.72
THRA-208	ENST00000578218	IGKV5-2	P06315	115 aa		32.03	■■■□□ 2.72
THRA-208	ENST00000578218	ATP2B4	P23634	1241 aa		32.03	■■■□□ 2.72
THRA-208	ENST00000578218	RSBN1L	Q6PCB5	846 aa	Predicted RBP	32.03	■■■□□ 2.72
THRA-208	ENST00000578218	C2orf69	Q8N8R5	385 aa		32.03	■■■□□ 2.72
THRA-208	ENST00000578218	TWISTNB	Q3B726	338 aa	Predicted RBP	32.02	■■■□□ 2.72
THRA-208	ENST00000578218	CCDC27	Q2M243	656 aa		32.01	■■■□□ 2.71
THRA-208	ENST00000578218	CWF19L2	Q2TBE0	894 aa	Known RBP	32.01	■■■□□ 2.71
THRA-208	ENST00000578218	CCDC184	Q52MB2	194 aa		32.01	■■■□□ 2.71
THRA-208	ENST00000578218	AGBL3	Q8NEM8	1001 aa		32.01	■■■□□ 2.71
THRA-208	ENST00000578218	RGMB	Q6NW40	437 aa		32	■■■□□ 2.71
THRA-208	ENST00000578218	MED23	Q9ULK4	1368 aa		31.99	■■■□□ 2.71
THRA-208	ENST00000578218	WWC1	Q8IX03	1113 aa		31.99	■■■□□ 2.71
THRA-208	ENST00000578218	GREM2	Q9H772	168 aa		31.99	■■■□□ 2.71
THRA-208	ENST00000578218	ASTN2	O75129	1339 aa	Predicted RBP	31.99	■■■□□ 2.71
THRA-208	ENST00000578218	ZNF646	O15015	1829 aa	Predicted RBP	31.98	■■■□□ 2.71
THRA-208	ENST00000578218	CASP8AP2	Q9UKL3	1982 aa		31.98	■■■□□ 2.71
THRA-208	ENST00000578218	NEURL1B	A8MQ27	555 aa		31.98	■■■□□ 2.71
THRA-208	ENST00000578218	ZNF280A	P59817	542 aa	Predicted RBP	31.98	■■■□□ 2.71
THRA-208	ENST00000578218	TTLL11	Q8NHH1	800 aa		31.98	■■■□□ 2.71
THRA-208	ENST00000578218	UBE3B	Q7Z3V4	1068 aa		31.97	■■■□□ 2.71
THRA-208	ENST00000578218	CACNA1F	O60840	1977 aa		31.96	■■■□□ 2.71
THRA-208	ENST00000578218	USP17L3	A6NCW0	530 aa		31.96	■■■□□ 2.71
THRA-208	ENST00000578218	USP17L4	A6NCW7	530 aa		31.96	■■■□□ 2.71
THRA-208	ENST00000578218	ANGEL2	Q5VTE6	544 aa	Known RBP	31.96	■■■□□ 2.71
THRA-208	ENST00000578218	G2E3	Q7L622	706 aa		31.96	■■■□□ 2.71
THRA-208	ENST00000578218	USP17L1	Q7RTZ2	530 aa		31.96	■■■□□ 2.71
THRA-208	ENST00000578218	PODN	Q7Z5L7	613 aa		31.96	■■■□□ 2.71
THRA-208	ENST00000578218	CDCA5	Q96FF9	252 aa		31.96	■■■□□ 2.71
THRA-208	ENST00000578218	ZIC5	Q96T25	663 aa		31.96	■■■□□ 2.71
THRA-208	ENST00000578218	BSDC1	Q9NW68	430 aa	Predicted RBP	31.96	■■■□□ 2.71
THRA-208	ENST00000578218	PAPPA2	Q9BXP8	1791 aa		31.95	■■■□□ 2.71
THRA-208	ENST00000578218	SLC4A2	P04920	1241 aa		31.95	■■■□□ 2.71
THRA-208	ENST00000578218	IL16	Q14005	1332 aa		31.95	■■■□□ 2.7
THRA-208	ENST00000578218	USP17L8	P0C7I0	530 aa		31.94	■■■□□ 2.7
THRA-208	ENST00000578218	ZNF157	P51786	506 aa	Predicted RBP	31.94	■■■□□ 2.7
THRA-208	ENST00000578218	SCARF1	Q14162	830 aa		31.94	■■■□□ 2.7
THRA-208	ENST00000578218	FBXW7	Q969H0	707 aa		31.94	■■■□□ 2.7
THRA-208	ENST00000578218	CCDC102A	Q96A19	550 aa		31.94	■■■□□ 2.7
THRA-208	ENST00000578218	MYOZ2	Q9NPC6	264 aa		31.94	■■■□□ 2.7
THRA-208	ENST00000578218	MINPP1	Q9UNW1	487 aa		31.94	■■■□□ 2.7
THRA-208	ENST00000578218	AKAP11	Q9UKA4	1901 aa		31.93	■■■□□ 2.7
THRA-208	ENST00000578218	CCDC85C	A6NKD9	419 aa		31.93	■■■□□ 2.7
THRA-208	ENST00000578218	IGHMBP2	P38935	993 aa	Known RBP	31.93	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms