RNA–Protein interactions for RNA: ENST00000577681.1

CCL13-202, Transcript of C-C motif chemokine ligand 13, humanhuman

TSL 1 (best)

Gene CCL13, Length 669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-202ENST00000577681 DNAJC5GQ8N7S2 189 aa10.01□□□□□ -0.81
CCL13-202ENST00000577681 C7orf43Q8WVR3 580 aa10.01□□□□□ -0.81
CCL13-202ENST00000577681 SPOCK2Q92563 424 aa10.01□□□□□ -0.81
CCL13-202ENST00000577681 RBM17Q96I25 401 aaKnown RBP10.01□□□□□ -0.81
CCL13-202ENST00000577681 BICC1Q9H694 974 aaKnown RBP10.01□□□□□ -0.81
CCL13-202ENST00000577681 TAF1P21675 1872 aa10.01□□□□□ -0.81
CCL13-202ENST00000577681 DPEP1P16444 411 aa10□□□□□ -0.81
CCL13-202ENST00000577681 RFX5P48382 616 aaPredicted RBP10□□□□□ -0.81
CCL13-202ENST00000577681 ATP8B2P98198 1209 aa10□□□□□ -0.81
CCL13-202ENST00000577681 GRAPQ13588 217 aa10□□□□□ -0.81
CCL13-202ENST00000577681 RTL5Q5HYW3 569 aaPredicted RBP10□□□□□ -0.81
CCL13-202ENST00000577681 CC2D2BQ6DHV5 1058 aa10□□□□□ -0.81
CCL13-202ENST00000577681 LMBR1LQ6UX01 489 aa10□□□□□ -0.81
CCL13-202ENST00000577681 DDX46Q7L014 1031 aaKnown RBP10□□□□□ -0.81
CCL13-202ENST00000577681 C16orf71Q8IYS4 520 aaPredicted RBP10□□□□□ -0.81
CCL13-202ENST00000577681 TNS4Q8IZW8 715 aa10□□□□□ -0.81
CCL13-202ENST00000577681 CCDC24Q8N4L8 307 aa10□□□□□ -0.81
CCL13-202ENST00000577681 GRAPLQ8TC17 118 aaPredicted RBP10□□□□□ -0.81
CCL13-202ENST00000577681 SSH3Q8TE77 659 aa10□□□□□ -0.81
CCL13-202ENST00000577681 JARID2Q92833 1246 aaPredicted RBP10□□□□□ -0.81
CCL13-202ENST00000577681 PIM2Q9P1W9 311 aa10□□□□□ -0.81
CCL13-202ENST00000577681 LRRFIP2Q9Y608 721 aaKnown RBP10□□□□□ -0.81
CCL13-202ENST00000577681 SNED1Q8TER0 1413 aa9.99□□□□□ -0.81
CCL13-202ENST00000577681 A0A0G2JLW4 131 aa9.99□□□□□ -0.81
CCL13-202ENST00000577681 CHRNA5P30532 468 aa9.99□□□□□ -0.81
CCL13-202ENST00000577681 RPS8P62241 208 aaKnown RBP9.99□□□□□ -0.81
CCL13-202ENST00000577681 HTRA3P83110 453 aa9.99□□□□□ -0.81
CCL13-202ENST00000577681 TTLL6Q8N841 843 aa9.99□□□□□ -0.81
CCL13-202ENST00000577681 RPGRQ92834 1020 aaKnown RBP9.99□□□□□ -0.81
CCL13-202ENST00000577681 PHF12Q96QT6 1004 aa9.99□□□□□ -0.81
CCL13-202ENST00000577681 CDC5LQ99459 802 aaKnown RBP9.99□□□□□ -0.81
CCL13-202ENST00000577681 GREM2Q9H772 168 aa9.99□□□□□ -0.81
CCL13-202ENST00000577681 COPRSQ9NQ92 184 aa9.99□□□□□ -0.81
CCL13-202ENST00000577681 CACNA1SQ13698 1873 aa9.99□□□□□ -0.81
CCL13-202ENST00000577681 FER1L6Q2WGJ9 1857 aa9.99□□□□□ -0.81
CCL13-202ENST00000577681 LTBP1Q14766 1721 aa9.99□□□□□ -0.81
CCL13-202ENST00000577681 A0A1B0GUL6 1792 aa9.98□□□□□ -0.81
CCL13-202ENST00000577681 ANKRD18BA2A2Z9 1011 aa9.98□□□□□ -0.81
CCL13-202ENST00000577681 ITGA6P23229 1130 aa9.98□□□□□ -0.81
CCL13-202ENST00000577681 IFIT5Q13325 482 aaKnown RBP9.98□□□□□ -0.81
CCL13-202ENST00000577681 ERICH6BQ5W0A0 696 aa9.98□□□□□ -0.81
CCL13-202ENST00000577681 CEP85Q6P2H3 762 aa9.98□□□□□ -0.81
CCL13-202ENST00000577681 ARHGAP27Q6ZUM4 889 aa9.98□□□□□ -0.81
CCL13-202ENST00000577681 SP8Q8IXZ3 490 aa9.98□□□□□ -0.81
CCL13-202ENST00000577681 CRBNQ96SW2 442 aa9.98□□□□□ -0.81
CCL13-202ENST00000577681 NMRK2Q9NPI5 230 aa9.98□□□□□ -0.81
CCL13-202ENST00000577681 BSDC1Q9NW68 430 aaPredicted RBP9.98□□□□□ -0.81
CCL13-202ENST00000577681 BCS1LQ9Y276 419 aa9.98□□□□□ -0.81
CCL13-202ENST00000577681 NOP58Q9Y2X3 529 aaKnown RBP9.98□□□□□ -0.81
CCL13-202ENST00000577681 PCNTO95613 3336 aa9.97□□□□□ -0.81
CCL13-202ENST00000577681 COL4A1P02462 1669 aa9.97□□□□□ -0.81
CCL13-202ENST00000577681 CIAO1O76071 339 aa9.97□□□□□ -0.81
CCL13-202ENST00000577681 PTPN12Q05209 780 aaKnown RBP9.97□□□□□ -0.81
CCL13-202ENST00000577681 CCDC57Q2TAC2 916 aa9.97□□□□□ -0.81
CCL13-202ENST00000577681 FAM161AQ3B820 660 aa9.97□□□□□ -0.81
CCL13-202ENST00000577681 DALRD3Q5D0E6 543 aaKnown RBP9.97□□□□□ -0.81
CCL13-202ENST00000577681 SOGA3Q5TF21 947 aa9.97□□□□□ -0.81
CCL13-202ENST00000577681 PRPF40BQ6NWY9 871 aaKnown RBP9.97□□□□□ -0.81
CCL13-202ENST00000577681 SIRT2Q8IXJ6 389 aa9.97□□□□□ -0.81
CCL13-202ENST00000577681 CELF1Q92879 486 aaKnown RBP9.97□□□□□ -0.81
CCL13-202ENST00000577681 KLRG1Q96E93 195 aa9.97□□□□□ -0.81
CCL13-202ENST00000577681 PODXL2Q9NZ53 605 aa9.97□□□□□ -0.81
CCL13-202ENST00000577681 ATP6V0A2Q9Y487 856 aa9.97□□□□□ -0.81
CCL13-202ENST00000577681 SRGAP3O43295 1099 aa9.96□□□□□ -0.82
CCL13-202ENST00000577681 ANKRD18AQ8IVF6 992 aa9.96□□□□□ -0.82
CCL13-202ENST00000577681 RBM46Q8TBY0 533 aaKnown RBP9.96□□□□□ -0.82
CCL13-202ENST00000577681 ZNF622Q969S3 477 aaKnown RBP eCLIP9.96□□□□□ -0.82
CCL13-202ENST00000577681 VPS33BQ9H267 617 aa9.96□□□□□ -0.82
CCL13-202ENST00000577681 SEC31BQ9NQW1 1179 aa9.96□□□□□ -0.82
CCL13-202ENST00000577681 RIPOR2Q9Y4F9 1068 aa9.96□□□□□ -0.82
CCL13-202ENST00000577681 LTBP3Q9NS15 1303 aa9.96□□□□□ -0.82
CCL13-202ENST00000577681 SPEF2Q9C093 1822 aa9.96□□□□□ -0.82
CCL13-202ENST00000577681 PNMA6EA0A0J9YXQ4 647 aa9.95□□□□□ -0.82
CCL13-202ENST00000577681 IGHMBP2P38935 993 aaKnown RBP9.95□□□□□ -0.82
CCL13-202ENST00000577681 PRELPP51888 382 aa9.95□□□□□ -0.82
CCL13-202ENST00000577681 HDAC1Q13547 482 aaPredicted RBP9.95□□□□□ -0.82
CCL13-202ENST00000577681 ZNF579Q8NAF0 562 aaKnown RBP9.95□□□□□ -0.82
CCL13-202ENST00000577681 SP7Q8TDD2 431 aaPredicted RBP9.95□□□□□ -0.82
CCL13-202ENST00000577681 RTFDC1Q9BY42 306 aaPredicted RBP9.95□□□□□ -0.82
CCL13-202ENST00000577681 PCDHB15Q9Y5E8 787 aa9.95□□□□□ -0.82
CCL13-202ENST00000577681 SBF1O95248 1867 aa9.95□□□□□ -0.82
CCL13-202ENST00000577681 DICER1Q9UPY3 1922 aaKnown RBP9.95□□□□□ -0.82
CCL13-202ENST00000577681 MROH5Q6ZUA9 1318 aa9.94□□□□□ -0.82
CCL13-202ENST00000577681 EYA2O00167 538 aa9.94□□□□□ -0.82
CCL13-202ENST00000577681 PPEF1O14829 653 aaPredicted RBP9.94□□□□□ -0.82
CCL13-202ENST00000577681 HMMRO75330 724 aa9.94□□□□□ -0.82
CCL13-202ENST00000577681 DCAF8Q5TAQ9 597 aa9.94□□□□□ -0.82
CCL13-202ENST00000577681 C15orf52Q6ZUT6 534 aaKnown RBP9.94□□□□□ -0.82
CCL13-202ENST00000577681 ATG9AQ7Z3C6 839 aa9.94□□□□□ -0.82
CCL13-202ENST00000577681 RTKN2Q8IZC4 609 aa9.94□□□□□ -0.82
CCL13-202ENST00000577681 JMYQ8N9B5 988 aa9.94□□□□□ -0.82
CCL13-202ENST00000577681 EXOC6Q8TAG9 804 aa9.94□□□□□ -0.82
CCL13-202ENST00000577681 PSMD1Q99460 953 aa9.94□□□□□ -0.82
CCL13-202ENST00000577681 ANKRD2Q9GZV1 360 aa9.94□□□□□ -0.82
CCL13-202ENST00000577681 MINPP1Q9UNW1 487 aa9.94□□□□□ -0.82
CCL13-202ENST00000577681 IL15P40933 162 aaPredicted RBP9.93□□□□□ -0.82
CCL13-202ENST00000577681 FSTL1Q12841 308 aa9.93□□□□□ -0.82
CCL13-202ENST00000577681 CCDC93Q567U6 631 aa9.93□□□□□ -0.82
CCL13-202ENST00000577681 HSP90AB4PQ58FF6 505 aa9.93□□□□□ -0.82
CCL13-202ENST00000577681 C9orf131Q5VYM1 1079 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms