RNA–Protein interactions for RNA: ENST00000577589.1

CUEDC1-205, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-205ENST00000577589 RIMBP2O15034 1052 aa16.69■□□□□ 0.26
CUEDC1-205ENST00000577589 ANXA1P04083 346 aa16.69■□□□□ 0.26
CUEDC1-205ENST00000577589 TM4SF4P48230 202 aa16.69■□□□□ 0.26
CUEDC1-205ENST00000577589 ZNF280AP59817 542 aaPredicted RBP16.69■□□□□ 0.26
CUEDC1-205ENST00000577589 CNGB1Q14028 1251 aaPredicted RBP16.69■□□□□ 0.26
CUEDC1-205ENST00000577589 DOK7Q18PE1 504 aa16.69■□□□□ 0.26
CUEDC1-205ENST00000577589 ANGEL2Q5VTE6 544 aaKnown RBP16.69■□□□□ 0.26
CUEDC1-205ENST00000577589 DDX46Q7L014 1031 aaKnown RBP16.69■□□□□ 0.26
CUEDC1-205ENST00000577589 VIL1P09327 827 aaKnown RBP16.68■□□□□ 0.26
CUEDC1-205ENST00000577589 FKBP1BP68106 108 aa16.68■□□□□ 0.26
CUEDC1-205ENST00000577589 GPSM2P81274 684 aa16.68■□□□□ 0.26
CUEDC1-205ENST00000577589 CELF1Q92879 486 aaKnown RBP16.68■□□□□ 0.26
CUEDC1-205ENST00000577589 CFHR5Q9BXR6 569 aa16.68■□□□□ 0.26
CUEDC1-205ENST00000577589 UBE2Q2LH0YL09 131 aa16.67■□□□□ 0.26
CUEDC1-205ENST00000577589 U2AF1L5P0DN76 240 aaPredicted RBP16.67■□□□□ 0.26
CUEDC1-205ENST00000577589 U2AF1Q01081 240 aaKnown RBP eCLIP16.67■□□□□ 0.26
CUEDC1-205ENST00000577589 SCARF1Q14162 830 aa16.67■□□□□ 0.26
CUEDC1-205ENST00000577589 TMC4Q7Z404 712 aa16.67■□□□□ 0.26
CUEDC1-205ENST00000577589 ZNF428Q96B54 188 aa16.67■□□□□ 0.26
CUEDC1-205ENST00000577589 GMLQ99445 158 aa16.66■□□□□ 0.26
CUEDC1-205ENST00000577589 NSFL1CQ9UNZ2 370 aaKnown RBP16.66■□□□□ 0.26
CUEDC1-205ENST00000577589 LAMA3Q16787 3333 aa16.66■□□□□ 0.26
CUEDC1-205ENST00000577589 FKTNO75072 461 aa16.65■□□□□ 0.26
CUEDC1-205ENST00000577589 PRAMEF18Q5VWM3 479 aa16.65■□□□□ 0.26
CUEDC1-205ENST00000577589 SH3TC1Q8TE82 1336 aa16.65■□□□□ 0.26
CUEDC1-205ENST00000577589 PITPNM2Q9BZ72 1349 aa16.65■□□□□ 0.26
CUEDC1-205ENST00000577589 C6orf229H3BNL8 230 aa16.64■□□□□ 0.25
CUEDC1-205ENST00000577589 MKRN3Q13064 507 aaKnown RBP16.64■□□□□ 0.25
CUEDC1-205ENST00000577589 TBC1D16Q8TBP0 767 aa16.64■□□□□ 0.25
CUEDC1-205ENST00000577589 COLQQ9Y215 455 aaPredicted RBP16.64■□□□□ 0.25
CUEDC1-205ENST00000577589 CLSPNQ9HAW4 1339 aa16.64■□□□□ 0.25
CUEDC1-205ENST00000577589 CAP1Q01518 475 aa16.63■□□□□ 0.25
CUEDC1-205ENST00000577589 OTOP1Q7RTM1 612 aa16.63■□□□□ 0.25
CUEDC1-205ENST00000577589 PNISRQ8TF01 805 aaKnown RBP16.63■□□□□ 0.25
CUEDC1-205ENST00000577589 TRMT112Q9UI30 125 aaKnown RBP16.63■□□□□ 0.25
CUEDC1-205ENST00000577589 CFAP53Q96M91 514 aa16.62■□□□□ 0.25
CUEDC1-205ENST00000577589 EN2P19622 333 aaPredicted RBP16.61■□□□□ 0.25
CUEDC1-205ENST00000577589 TCIRG1Q13488 830 aa16.61■□□□□ 0.25
CUEDC1-205ENST00000577589 SF3B3Q15393 1217 aaKnown RBP16.61■□□□□ 0.25
CUEDC1-205ENST00000577589 RSBN1LQ6PCB5 846 aaPredicted RBP16.61■□□□□ 0.25
CUEDC1-205ENST00000577589 MYOZ2Q9NPC6 264 aa16.61■□□□□ 0.25
CUEDC1-205ENST00000577589 COPS6Q7L5N1 327 aa16.6■□□□□ 0.25
CUEDC1-205ENST00000577589 AGBL3Q8NEM8 1001 aa16.6■□□□□ 0.25
CUEDC1-205ENST00000577589 XAGE3Q8WTP9 111 aa16.6■□□□□ 0.25
CUEDC1-205ENST00000577589 NUDCQ9Y266 331 aa16.6■□□□□ 0.25
CUEDC1-205ENST00000577589 TRIM17Q9Y577 477 aa16.6■□□□□ 0.25
CUEDC1-205ENST00000577589 PTPN12Q05209 780 aaKnown RBP16.59■□□□□ 0.25
CUEDC1-205ENST00000577589 NBPF9Q3BBW0 867 aa16.59■□□□□ 0.25
CUEDC1-205ENST00000577589 ARMC5Q96C12 935 aa16.59■□□□□ 0.25
CUEDC1-205ENST00000577589 EYA3Q99504 573 aa16.59■□□□□ 0.25
CUEDC1-205ENST00000577589 PODXL2Q9NZ53 605 aa16.59■□□□□ 0.25
CUEDC1-205ENST00000577589 EIF2S2P20042 333 aaKnown RBP16.58■□□□□ 0.24
CUEDC1-205ENST00000577589 PPP2R1AP30153 589 aa16.58■□□□□ 0.24
CUEDC1-205ENST00000577589 SREBF2Q12772 1141 aa16.58■□□□□ 0.24
CUEDC1-205ENST00000577589 HSP90AB3PQ58FF7 597 aa16.58■□□□□ 0.24
CUEDC1-205ENST00000577589 INTS3Q68E01 1043 aaKnown RBP16.58■□□□□ 0.24
CUEDC1-205ENST00000577589 PLEKHF1Q96S99 279 aa16.58■□□□□ 0.24
CUEDC1-205ENST00000577589 UNC80Q8N2C7 3258 aa16.58■□□□□ 0.24
CUEDC1-205ENST00000577589 SSC5DA1L4H1 1573 aa16.57■□□□□ 0.24
CUEDC1-205ENST00000577589 SPRYD7Q5W111 196 aa16.57■□□□□ 0.24
CUEDC1-205ENST00000577589 OTUD5Q96G74 571 aa16.57■□□□□ 0.24
CUEDC1-205ENST00000577589 FAM89AQ96GI7 184 aa16.57■□□□□ 0.24
CUEDC1-205ENST00000577589 IGF2BP3O00425 579 aaKnown RBP eCLIP16.56■□□□□ 0.24
CUEDC1-205ENST00000577589 UFL1O94874 794 aa16.56■□□□□ 0.24
CUEDC1-205ENST00000577589 USP17L8P0C7I0 530 aa16.56■□□□□ 0.24
CUEDC1-205ENST00000577589 AIMP1Q12904 312 aaKnown RBP16.56■□□□□ 0.24
CUEDC1-205ENST00000577589 LDLRAD1Q5T700 205 aa16.56■□□□□ 0.24
CUEDC1-205ENST00000577589 ISCA1Q9BUE6 129 aa16.56■□□□□ 0.24
CUEDC1-205ENST00000577589 PTPN22Q9Y2R2 807 aa16.56■□□□□ 0.24
CUEDC1-205ENST00000577589 ZSWIM8A7E2V4 1837 aa16.55■□□□□ 0.24
CUEDC1-205ENST00000577589 NFE2L2Q16236 605 aa16.55■□□□□ 0.24
CUEDC1-205ENST00000577589 NECTIN2Q92692 538 aa16.55■□□□□ 0.24
CUEDC1-205ENST00000577589 ZC3H12CQ9C0D7 883 aaKnown RBP16.55■□□□□ 0.24
CUEDC1-205ENST00000577589 FZD1Q9UP38 647 aa16.55■□□□□ 0.24
CUEDC1-205ENST00000577589 SPEF2Q9C093 1822 aa16.54■□□□□ 0.24
CUEDC1-205ENST00000577589 WTIPA6NIX2 430 aaPredicted RBP16.54■□□□□ 0.24
CUEDC1-205ENST00000577589 RPS8P62241 208 aaKnown RBP16.54■□□□□ 0.24
CUEDC1-205ENST00000577589 TTLL12Q14166 644 aaPredicted RBP16.54■□□□□ 0.24
CUEDC1-205ENST00000577589 IFNL1Q8IU54 200 aa16.54■□□□□ 0.24
CUEDC1-205ENST00000577589 CD99L2Q8TCZ2 262 aa16.54■□□□□ 0.24
CUEDC1-205ENST00000577589 MXD3Q9BW11 206 aa16.54■□□□□ 0.24
CUEDC1-205ENST00000577589 SEC31BQ9NQW1 1179 aa16.54■□□□□ 0.24
CUEDC1-205ENST00000577589 TSPYL4Q9UJ04 414 aa16.54■□□□□ 0.24
CUEDC1-205ENST00000577589 OTOFQ9HC10 1997 aa16.54■□□□□ 0.24
CUEDC1-205ENST00000577589 H0YGN5 161 aa16.53■□□□□ 0.24
CUEDC1-205ENST00000577589 WNT10BO00744 389 aa16.53■□□□□ 0.24
CUEDC1-205ENST00000577589 DLL1O00548 723 aa16.52■□□□□ 0.24
CUEDC1-205ENST00000577589 PRKG1Q13976 671 aa16.52■□□□□ 0.24
CUEDC1-205ENST00000577589 RTL5Q5HYW3 569 aaPredicted RBP16.52■□□□□ 0.24
CUEDC1-205ENST00000577589 ZNF333Q96JL9 665 aa16.52■□□□□ 0.24
CUEDC1-205ENST00000577589 GGA1Q9UJY5 639 aa16.52■□□□□ 0.24
CUEDC1-205ENST00000577589 ECM29Q5VYK3 1845 aa16.52■□□□□ 0.23
CUEDC1-205ENST00000577589 ATP5J2-PTCD1G3V325 749 aa16.51■□□□□ 0.23
CUEDC1-205ENST00000577589 SASH1O94885 1247 aa16.51■□□□□ 0.23
CUEDC1-205ENST00000577589 ALDH1A1P00352 501 aa16.51■□□□□ 0.23
CUEDC1-205ENST00000577589 KRT24Q2M2I5 525 aa16.51■□□□□ 0.23
CUEDC1-205ENST00000577589 USP17L3A6NCW0 530 aa16.5■□□□□ 0.23
CUEDC1-205ENST00000577589 USP17L4A6NCW7 530 aa16.5■□□□□ 0.23
CUEDC1-205ENST00000577589 CRHR2Q13324 411 aa16.5■□□□□ 0.23
CUEDC1-205ENST00000577589 DACT2Q5SW24 774 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms