RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 ZBED9Q6R2W3 1325 aa17.65■□□□□ 0.42
GGA3-203ENST00000577435 ANKRD18BA2A2Z9 1011 aa17.64■□□□□ 0.41
GGA3-203ENST00000577435 NBPF7P0C2Y1 421 aaPredicted RBP17.64■□□□□ 0.41
GGA3-203ENST00000577435 HSPA6P17066 643 aa17.64■□□□□ 0.41
GGA3-203ENST00000577435 ATP2B4P23634 1241 aa17.64■□□□□ 0.41
GGA3-203ENST00000577435 EPHA10Q5JZY3 1008 aa17.64■□□□□ 0.41
GGA3-203ENST00000577435 LMBR1LQ6UX01 489 aa17.64■□□□□ 0.41
GGA3-203ENST00000577435 SMC1BQ8NDV3 1235 aa17.64■□□□□ 0.41
GGA3-203ENST00000577435 KAZALD1Q96I82 304 aa17.64■□□□□ 0.41
GGA3-203ENST00000577435 API5Q9BZZ5 524 aaKnown RBP17.64■□□□□ 0.41
GGA3-203ENST00000577435 TAF1DQ9H5J8 278 aaPredicted RBP17.64■□□□□ 0.41
GGA3-203ENST00000577435 HACL1Q9UJ83 578 aa17.64■□□□□ 0.41
GGA3-203ENST00000577435 IFIT5Q13325 482 aaKnown RBP17.63■□□□□ 0.41
GGA3-203ENST00000577435 ZC3H12CQ9C0D7 883 aaKnown RBP17.63■□□□□ 0.41
GGA3-203ENST00000577435 USP44Q9H0E7 712 aa17.63■□□□□ 0.41
GGA3-203ENST00000577435 GJA3Q9Y6H8 435 aa17.63■□□□□ 0.41
GGA3-203ENST00000577435 CEP350Q5VT06 3117 aa17.63■□□□□ 0.41
GGA3-203ENST00000577435 YDJCA8MPS7 323 aa17.62■□□□□ 0.41
GGA3-203ENST00000577435 RIMBP2O15034 1052 aa17.62■□□□□ 0.41
GGA3-203ENST00000577435 UFL1O94874 794 aa17.62■□□□□ 0.41
GGA3-203ENST00000577435 CCT4P50991 539 aaKnown RBP17.62■□□□□ 0.41
GGA3-203ENST00000577435 TNIP1Q15025 636 aa17.62■□□□□ 0.41
GGA3-203ENST00000577435 CIAPIN1Q6FI81 312 aa17.62■□□□□ 0.41
GGA3-203ENST00000577435 SUCLG2Q96I99 432 aa17.62■□□□□ 0.41
GGA3-203ENST00000577435 MPHOSPH8Q99549 860 aa17.62■□□□□ 0.41
GGA3-203ENST00000577435 SPEF2Q9C093 1822 aa17.62■□□□□ 0.41
GGA3-203ENST00000577435 SCNN1DP51172 638 aa17.61■□□□□ 0.41
GGA3-203ENST00000577435 RABL6Q3YEC7 729 aaPredicted RBP17.61■□□□□ 0.41
GGA3-203ENST00000577435 ANKRD2Q9GZV1 360 aa17.61■□□□□ 0.41
GGA3-203ENST00000577435 LEMD3Q9Y2U8 911 aa17.61■□□□□ 0.41
GGA3-203ENST00000577435 KIF16BQ96L93 1317 aa17.61■□□□□ 0.41
GGA3-203ENST00000577435 EPHX2P34913 555 aa17.6■□□□□ 0.41
GGA3-203ENST00000577435 CCDC57Q2TAC2 916 aa17.6■□□□□ 0.41
GGA3-203ENST00000577435 PNMA8AQ86V59 439 aaPredicted RBP17.6■□□□□ 0.41
GGA3-203ENST00000577435 DBNDD1Q9H9R9 158 aa17.6■□□□□ 0.41
GGA3-203ENST00000577435 IPO8O15397 1037 aaKnown RBP17.59■□□□□ 0.41
GGA3-203ENST00000577435 ECE2O60344 883 aa17.59■□□□□ 0.41
GGA3-203ENST00000577435 RAD17O75943 681 aa17.59■□□□□ 0.41
GGA3-203ENST00000577435 LMOD1P29536 600 aaPredicted RBP17.59■□□□□ 0.41
GGA3-203ENST00000577435 CHADLQ6NUI6 762 aa17.59■□□□□ 0.41
GGA3-203ENST00000577435 LDHDQ86WU2 507 aa17.59■□□□□ 0.41
GGA3-203ENST00000577435 CHMP3Q9Y3E7 222 aa17.59■□□□□ 0.41
GGA3-203ENST00000577435 EPS15P42566 896 aa17.58■□□□□ 0.4
GGA3-203ENST00000577435 APLP1P51693 650 aa17.58■□□□□ 0.4
GGA3-203ENST00000577435 CHRNDQ07001 517 aa17.58■□□□□ 0.4
GGA3-203ENST00000577435 DOK7Q18PE1 504 aa17.58■□□□□ 0.4
GGA3-203ENST00000577435 INTS3Q68E01 1043 aaKnown RBP17.58■□□□□ 0.4
GGA3-203ENST00000577435 GPR101Q96P66 508 aaPredicted RBP17.58■□□□□ 0.4
GGA3-203ENST00000577435 BICC1Q9H694 974 aaKnown RBP17.58■□□□□ 0.4
GGA3-203ENST00000577435 GPRC5DQ9NZD1 345 aa17.58■□□□□ 0.4
GGA3-203ENST00000577435 SCN9AQ15858 1988 aa17.57■□□□□ 0.4
GGA3-203ENST00000577435 MED23Q9ULK4 1368 aa17.57■□□□□ 0.4
GGA3-203ENST00000577435 WTIPA6NIX2 430 aaPredicted RBP17.57■□□□□ 0.4
GGA3-203ENST00000577435 BCAR3O75815 825 aa17.57■□□□□ 0.4
GGA3-203ENST00000577435 POTEIP0CG38 1075 aa17.57■□□□□ 0.4
GGA3-203ENST00000577435 POTEJP0CG39 1038 aa17.57■□□□□ 0.4
GGA3-203ENST00000577435 GMPSP49915 693 aaPredicted RBP17.57■□□□□ 0.4
GGA3-203ENST00000577435 PODNQ7Z5L7 613 aa17.57■□□□□ 0.4
GGA3-203ENST00000577435 ANKRD44Q8N8A2 993 aa17.57■□□□□ 0.4
GGA3-203ENST00000577435 DPF2Q92785 391 aa17.57■□□□□ 0.4
GGA3-203ENST00000577435 ADAMTSL1Q8N6G6 1762 aa17.56■□□□□ 0.4
GGA3-203ENST00000577435 ZNF804BA4D1E1 1349 aa17.56■□□□□ 0.4
GGA3-203ENST00000577435 PSMD14O00487 310 aa17.56■□□□□ 0.4
GGA3-203ENST00000577435 LDHAL6AQ6ZMR3 332 aa17.56■□□□□ 0.4
GGA3-203ENST00000577435 USP50Q70EL3 339 aaPredicted RBP17.56■□□□□ 0.4
GGA3-203ENST00000577435 ZNF594Q96JF6 807 aaPredicted RBP17.56■□□□□ 0.4
GGA3-203ENST00000577435 KCNQ5Q9NR82 932 aa17.56■□□□□ 0.4
GGA3-203ENST00000577435 HDAC5Q9UQL6 1122 aa17.56■□□□□ 0.4
GGA3-203ENST00000577435 G3V3G9 751 aa17.55■□□□□ 0.4
GGA3-203ENST00000577435 VIL1P09327 827 aaKnown RBP17.55■□□□□ 0.4
GGA3-203ENST00000577435 RPS12P25398 132 aaKnown RBP17.55■□□□□ 0.4
GGA3-203ENST00000577435 TAF7LQ5H9L4 462 aa17.55■□□□□ 0.4
GGA3-203ENST00000577435 DCAF8Q5TAQ9 597 aa17.55■□□□□ 0.4
GGA3-203ENST00000577435 ATF7IPQ6VMQ6 1270 aa17.55■□□□□ 0.4
GGA3-203ENST00000577435 C15orf52Q6ZUT6 534 aaKnown RBP17.55■□□□□ 0.4
GGA3-203ENST00000577435 ADARB2Q9NS39 739 aaKnown RBP17.55■□□□□ 0.4
GGA3-203ENST00000577435 PSME4Q14997 1843 aa17.54■□□□□ 0.4
GGA3-203ENST00000577435 TRIM27P14373 513 aa17.54■□□□□ 0.4
GGA3-203ENST00000577435 EAPPQ56P03 285 aaPredicted RBP17.54■□□□□ 0.4
GGA3-203ENST00000577435 COA1Q9GZY4 146 aa17.54■□□□□ 0.4
GGA3-203ENST00000577435 UBTFL1P0CB47 393 aaPredicted RBP17.53■□□□□ 0.4
GGA3-203ENST00000577435 TXNRD3Q86VQ6 643 aa17.53■□□□□ 0.4
GGA3-203ENST00000577435 CNNM1Q9NRU3 951 aa17.53■□□□□ 0.4
GGA3-203ENST00000577435 CNOT7Q9UIV1 285 aaKnown RBP17.53■□□□□ 0.4
GGA3-203ENST00000577435 RIPOR2Q9Y4F9 1068 aa17.53■□□□□ 0.4
GGA3-203ENST00000577435 A0A1B0GUL6 1792 aa17.53■□□□□ 0.4
GGA3-203ENST00000577435 IRS2Q9Y4H2 1338 aa17.52■□□□□ 0.4
GGA3-203ENST00000577435 H7C1D1 291 aa17.52■□□□□ 0.4
GGA3-203ENST00000577435 TAF5LO75529 589 aa17.52■□□□□ 0.4
GGA3-203ENST00000577435 ITGBL1O95965 494 aaPredicted RBP17.52■□□□□ 0.4
GGA3-203ENST00000577435 ZKSCAN2Q63HK3 967 aa17.52■□□□□ 0.4
GGA3-203ENST00000577435 HELBQ8NG08 1087 aaPredicted RBP17.52■□□□□ 0.4
GGA3-203ENST00000577435 PGAP2Q9UHJ9 254 aa17.52■□□□□ 0.4
GGA3-203ENST00000577435 CLEC11AQ9Y240 323 aa17.52■□□□□ 0.4
GGA3-203ENST00000577435 ZBTB12Q9Y330 459 aaPredicted RBP17.52■□□□□ 0.4
GGA3-203ENST00000577435 ZNF609O15014 1411 aa17.52■□□□□ 0.4
GGA3-203ENST00000577435 PASKQ96RG2 1323 aa17.51■□□□□ 0.39
GGA3-203ENST00000577435 USP17L3A6NCW0 530 aa17.51■□□□□ 0.39
GGA3-203ENST00000577435 USP17L4A6NCW7 530 aa17.51■□□□□ 0.39
GGA3-203ENST00000577435 KCNJ4P48050 445 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms