RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 PTPN12Q05209 780 aaKnown RBP25.01■■□□□ 1.59
SUPT4H1-202ENST00000577396 C9orf131Q5VYM1 1079 aa25.01■■□□□ 1.59
SUPT4H1-202ENST00000577396 KLHDC4Q8TBB5 520 aa25.01■■□□□ 1.59
SUPT4H1-202ENST00000577396 PUS3Q9BZE2 481 aaKnown RBP25.01■■□□□ 1.59
SUPT4H1-202ENST00000577396 C1orf115Q9H7X2 142 aa25.01■■□□□ 1.59
SUPT4H1-202ENST00000577396 ZNF277Q9NRM2 450 aaPredicted RBP25.01■■□□□ 1.59
SUPT4H1-202ENST00000577396 POLLQ9UGP5 575 aa25.01■■□□□ 1.59
SUPT4H1-202ENST00000577396 SUPT16HQ9Y5B9 1047 aaKnown RBP25.01■■□□□ 1.59
SUPT4H1-202ENST00000577396 TAF7LQ5H9L4 462 aa25■■□□□ 1.59
SUPT4H1-202ENST00000577396 CHD4Q14839 1912 aa25■■□□□ 1.59
SUPT4H1-202ENST00000577396 RIPOR2Q9Y4F9 1068 aa24.99■■□□□ 1.59
SUPT4H1-202ENST00000577396 PNMA6EA0A0J9YXQ4 647 aa24.98■■□□□ 1.59
SUPT4H1-202ENST00000577396 TBC1D16Q8TBP0 767 aa24.98■■□□□ 1.59
SUPT4H1-202ENST00000577396 ANKIB1Q9P2G1 1089 aa24.98■■□□□ 1.59
SUPT4H1-202ENST00000577396 DUOX1Q9NRD9 1551 aa24.98■■□□□ 1.59
SUPT4H1-202ENST00000577396 LTBP1Q14766 1721 aa24.98■■□□□ 1.59
SUPT4H1-202ENST00000577396 XDHP47989 1333 aa24.98■■□□□ 1.59
SUPT4H1-202ENST00000577396 WTIPA6NIX2 430 aaPredicted RBP24.97■■□□□ 1.59
SUPT4H1-202ENST00000577396 SRGAP3O43295 1099 aa24.97■■□□□ 1.59
SUPT4H1-202ENST00000577396 ATP8B2P98198 1209 aa24.97■■□□□ 1.59
SUPT4H1-202ENST00000577396 CHRNDQ07001 517 aa24.97■■□□□ 1.59
SUPT4H1-202ENST00000577396 VPS33BQ9H267 617 aa24.97■■□□□ 1.59
SUPT4H1-202ENST00000577396 RNF181Q9P0P0 153 aa24.97■■□□□ 1.59
SUPT4H1-202ENST00000577396 SPEF2Q9C093 1822 aa24.97■■□□□ 1.59
SUPT4H1-202ENST00000577396 LRRC24Q50LG9 513 aa24.97■■□□□ 1.59
SUPT4H1-202ENST00000577396 SUPT20HQ8NEM7 779 aa24.97■■□□□ 1.59
SUPT4H1-202ENST00000577396 COPRSQ9NQ92 184 aa24.97■■□□□ 1.59
SUPT4H1-202ENST00000577396 CNNM1Q9NRU3 951 aa24.97■■□□□ 1.59
SUPT4H1-202ENST00000577396 IARSP41252 1262 aaKnown RBP24.96■■□□□ 1.59
SUPT4H1-202ENST00000577396 ANKRD2Q9GZV1 360 aa24.96■■□□□ 1.59
SUPT4H1-202ENST00000577396 CHMP4BQ9H444 224 aaKnown RBP24.96■■□□□ 1.59
SUPT4H1-202ENST00000577396 CCDC88AQ3V6T2 1871 aa24.95■■□□□ 1.59
SUPT4H1-202ENST00000577396 POLA2Q14181 598 aa24.95■■□□□ 1.58
SUPT4H1-202ENST00000577396 ATP2B4P23634 1241 aa24.94■■□□□ 1.58
SUPT4H1-202ENST00000577396 CEP85Q6P2H3 762 aa24.94■■□□□ 1.58
SUPT4H1-202ENST00000577396 SSH3Q8TE77 659 aa24.94■■□□□ 1.58
SUPT4H1-202ENST00000577396 GGA1Q9UJY5 639 aa24.94■■□□□ 1.58
SUPT4H1-202ENST00000577396 PA2G4Q9UQ80 394 aaKnown RBP24.94■■□□□ 1.58
SUPT4H1-202ENST00000577396 C6orf229H3BNL8 230 aa24.94■■□□□ 1.58
SUPT4H1-202ENST00000577396 EYA2O00167 538 aa24.94■■□□□ 1.58
SUPT4H1-202ENST00000577396 KIAA2012Q0VF49 1180 aa24.94■■□□□ 1.58
SUPT4H1-202ENST00000577396 ATG9AQ7Z3C6 839 aa24.94■■□□□ 1.58
SUPT4H1-202ENST00000577396 HELBQ8NG08 1087 aaPredicted RBP24.94■■□□□ 1.58
SUPT4H1-202ENST00000577396 FBXO3Q9UK99 471 aa24.94■■□□□ 1.58
SUPT4H1-202ENST00000577396 LEMD3Q9Y2U8 911 aa24.94■■□□□ 1.58
SUPT4H1-202ENST00000577396 TAF5LO75529 589 aa24.93■■□□□ 1.58
SUPT4H1-202ENST00000577396 UFL1O94874 794 aa24.93■■□□□ 1.58
SUPT4H1-202ENST00000577396 AOC3Q16853 763 aa24.93■■□□□ 1.58
SUPT4H1-202ENST00000577396 WASHC4Q2M389 1173 aa24.92■■□□□ 1.58
SUPT4H1-202ENST00000577396 GPR101Q96P66 508 aaPredicted RBP24.92■■□□□ 1.58
SUPT4H1-202ENST00000577396 COL4A5P29400 1685 aa24.92■■□□□ 1.58
SUPT4H1-202ENST00000577396 MROH5Q6ZUA9 1318 aa24.92■■□□□ 1.58
SUPT4H1-202ENST00000577396 SNAP23O00161 211 aa24.91■■□□□ 1.58
SUPT4H1-202ENST00000577396 PPIP5K2O43314 1243 aa24.91■■□□□ 1.58
SUPT4H1-202ENST00000577396 CIAO1O76071 339 aa24.91■■□□□ 1.58
SUPT4H1-202ENST00000577396 CRBNQ96SW2 442 aa24.91■■□□□ 1.58
SUPT4H1-202ENST00000577396 SIRT2Q8IXJ6 389 aa24.9■■□□□ 1.58
SUPT4H1-202ENST00000577396 LARGE2Q8N3Y3 721 aa24.9■■□□□ 1.58
SUPT4H1-202ENST00000577396 VGLL2Q8N8G2 317 aa24.9■■□□□ 1.58
SUPT4H1-202ENST00000577396 SIL1Q9H173 461 aa24.9■■□□□ 1.58
SUPT4H1-202ENST00000577396 DICER1Q9UPY3 1922 aaKnown RBP24.9■■□□□ 1.58
SUPT4H1-202ENST00000577396 ZNF804BA4D1E1 1349 aa24.9■■□□□ 1.58
SUPT4H1-202ENST00000577396 RPAP2Q8IXW5 612 aaPredicted RBP24.9■■□□□ 1.58
SUPT4H1-202ENST00000577396 EYA3Q99504 573 aa24.9■■□□□ 1.58
SUPT4H1-202ENST00000577396 RIMBP2O15034 1052 aa24.89■■□□□ 1.57
SUPT4H1-202ENST00000577396 ZC3H12CQ9C0D7 883 aaKnown RBP24.89■■□□□ 1.57
SUPT4H1-202ENST00000577396 ZC3H4Q9UPT8 1303 aaKnown RBP24.89■■□□□ 1.57
SUPT4H1-202ENST00000577396 IRS2Q9Y4H2 1338 aa24.89■■□□□ 1.57
SUPT4H1-202ENST00000577396 FZD9O00144 591 aa24.88■■□□□ 1.57
SUPT4H1-202ENST00000577396 PDE8BO95263 885 aa24.88■■□□□ 1.57
SUPT4H1-202ENST00000577396 YY1P25490 414 aa24.88■■□□□ 1.57
SUPT4H1-202ENST00000577396 IL15P40933 162 aaPredicted RBP24.87■■□□□ 1.57
SUPT4H1-202ENST00000577396 METTL24Q5JXM2 366 aa24.87■■□□□ 1.57
SUPT4H1-202ENST00000577396 TXNRD3Q86VQ6 643 aa24.87■■□□□ 1.57
SUPT4H1-202ENST00000577396 JDP2Q8WYK2 163 aa24.87■■□□□ 1.57
SUPT4H1-202ENST00000577396 A0A1B0GUL6 1792 aa24.86■■□□□ 1.57
SUPT4H1-202ENST00000577396 KLRK1P26718 216 aa24.86■■□□□ 1.57
SUPT4H1-202ENST00000577396 UBE4AQ14139 1066 aa24.86■■□□□ 1.57
SUPT4H1-202ENST00000577396 C15orf52Q6ZUT6 534 aaKnown RBP24.86■■□□□ 1.57
SUPT4H1-202ENST00000577396 NOP58Q9Y2X3 529 aaKnown RBP24.86■■□□□ 1.57
SUPT4H1-202ENST00000577396 MED23Q9ULK4 1368 aa24.85■■□□□ 1.57
SUPT4H1-202ENST00000577396 ZNRF3Q9ULT6 936 aa24.85■■□□□ 1.57
SUPT4H1-202ENST00000577396 NIM1KQ8IY84 436 aa24.84■■□□□ 1.57
SUPT4H1-202ENST00000577396 FGFR2P21802 821 aa24.83■■□□□ 1.57
SUPT4H1-202ENST00000577396 KCNJ4P48050 445 aa24.83■■□□□ 1.57
SUPT4H1-202ENST00000577396 DOK7Q18PE1 504 aa24.83■■□□□ 1.57
SUPT4H1-202ENST00000577396 YDJCA8MPS7 323 aa24.83■■□□□ 1.56
SUPT4H1-202ENST00000577396 SURF6O75683 361 aaKnown RBP24.83■■□□□ 1.56
SUPT4H1-202ENST00000577396 DBNDD1Q9H9R9 158 aa24.83■■□□□ 1.56
SUPT4H1-202ENST00000577396 CEP126Q9P2H0 1117 aa24.83■■□□□ 1.56
SUPT4H1-202ENST00000577396 PCDHB15Q9Y5E8 787 aa24.83■■□□□ 1.56
SUPT4H1-202ENST00000577396 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.83■■□□□ 1.56
SUPT4H1-202ENST00000577396 SASH1O94885 1247 aa24.82■■□□□ 1.56
SUPT4H1-202ENST00000577396 G3BP1Q13283 466 aaKnown RBP eCLIP24.82■■□□□ 1.56
SUPT4H1-202ENST00000577396 GLTPD2A6NH11 291 aa24.81■■□□□ 1.56
SUPT4H1-202ENST00000577396 TIAM2Q8IVF5 1701 aa24.81■■□□□ 1.56
SUPT4H1-202ENST00000577396 ZNF541Q9H0D2 1346 aa24.81■■□□□ 1.56
SUPT4H1-202ENST00000577396 ECE2O60344 883 aa24.8■■□□□ 1.56
SUPT4H1-202ENST00000577396 PUM3Q15397 648 aaKnown RBP24.8■■□□□ 1.56
SUPT4H1-202ENST00000577396 EXOC6Q8TAG9 804 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 192.6 ms