RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 RPS8P62241 208 aaKnown RBP17.4■□□□□ 0.38
COPS3-214ENST00000577246 FKBP1BP68106 108 aa17.4■□□□□ 0.38
COPS3-214ENST00000577246 DOK7Q18PE1 504 aa17.4■□□□□ 0.38
COPS3-214ENST00000577246 TBC1D16Q8TBP0 767 aa17.4■□□□□ 0.38
COPS3-214ENST00000577246 ISCA1Q9BUE6 129 aa17.4■□□□□ 0.38
COPS3-214ENST00000577246 CASP8AP2Q9UKL3 1982 aa17.4■□□□□ 0.38
COPS3-214ENST00000577246 RTL9Q8NET4 1388 aa17.4■□□□□ 0.38
COPS3-214ENST00000577246 CHL1O00533 1208 aa17.39■□□□□ 0.37
COPS3-214ENST00000577246 DLK2Q6UY11 383 aa17.39■□□□□ 0.37
COPS3-214ENST00000577246 CTU1Q7Z7A3 348 aaKnown RBP17.39■□□□□ 0.37
COPS3-214ENST00000577246 HYPKQ9NX55 129 aa17.39■□□□□ 0.37
COPS3-214ENST00000577246 PODXL2Q9NZ53 605 aa17.39■□□□□ 0.37
COPS3-214ENST00000577246 DDX60Q8IY21 1712 aaKnown RBP17.38■□□□□ 0.37
COPS3-214ENST00000577246 IRS4O14654 1257 aaPredicted RBP17.38■□□□□ 0.37
COPS3-214ENST00000577246 TRIM28Q13263 835 aaKnown RBP17.38■□□□□ 0.37
COPS3-214ENST00000577246 AGBL3Q8NEM8 1001 aa17.38■□□□□ 0.37
COPS3-214ENST00000577246 CDCA5Q96FF9 252 aa17.38■□□□□ 0.37
COPS3-214ENST00000577246 ANKIB1Q9P2G1 1089 aa17.38■□□□□ 0.37
COPS3-214ENST00000577246 ZNF609O15014 1411 aa17.38■□□□□ 0.37
COPS3-214ENST00000577246 ATP5J2-PTCD1G3V325 749 aa17.37■□□□□ 0.37
COPS3-214ENST00000577246 SOX10P56693 466 aa17.37■□□□□ 0.37
COPS3-214ENST00000577246 PKN2Q16513 984 aaKnown RBP17.37■□□□□ 0.37
COPS3-214ENST00000577246 CSRNP1Q96S65 589 aa17.37■□□□□ 0.37
COPS3-214ENST00000577246 GGA1Q9UJY5 639 aa17.37■□□□□ 0.37
COPS3-214ENST00000577246 LAS1LQ9Y4W2 734 aaKnown RBP17.37■□□□□ 0.37
COPS3-214ENST00000577246 UFL1O94874 794 aa17.36■□□□□ 0.37
COPS3-214ENST00000577246 ZNF280AP59817 542 aaPredicted RBP17.36■□□□□ 0.37
COPS3-214ENST00000577246 RALBP1Q15311 655 aa17.36■□□□□ 0.37
COPS3-214ENST00000577246 KCNQ5Q9NR82 932 aa17.36■□□□□ 0.37
COPS3-214ENST00000577246 GOLGA2Q08379 1002 aa17.35■□□□□ 0.37
COPS3-214ENST00000577246 NEUROD2Q15784 382 aa17.35■□□□□ 0.37
COPS3-214ENST00000577246 KRT24Q2M2I5 525 aa17.35■□□□□ 0.37
COPS3-214ENST00000577246 RTL5Q5HYW3 569 aaPredicted RBP17.35■□□□□ 0.37
COPS3-214ENST00000577246 ANGEL2Q5VTE6 544 aaKnown RBP17.35■□□□□ 0.37
COPS3-214ENST00000577246 RSBN1LQ6PCB5 846 aaPredicted RBP17.35■□□□□ 0.37
COPS3-214ENST00000577246 RASAL3Q86YV0 1011 aa17.35■□□□□ 0.37
COPS3-214ENST00000577246 ZBTB38Q8NAP3 1195 aaPredicted RBP17.35■□□□□ 0.37
COPS3-214ENST00000577246 ZNF428Q96B54 188 aa17.35■□□□□ 0.37
COPS3-214ENST00000577246 PITPNM2Q9BZ72 1349 aa17.35■□□□□ 0.37
COPS3-214ENST00000577246 SCARF1Q14162 830 aa17.34■□□□□ 0.37
COPS3-214ENST00000577246 CCDC152Q4G0S7 254 aa17.34■□□□□ 0.37
COPS3-214ENST00000577246 PRPF38BQ5VTL8 546 aaKnown RBP17.34■□□□□ 0.37
COPS3-214ENST00000577246 USP17L8P0C7I0 530 aa17.33■□□□□ 0.36
COPS3-214ENST00000577246 RIC3Q7Z5B4 369 aa17.33■□□□□ 0.36
COPS3-214ENST00000577246 HDAC9Q9UKV0 1011 aa17.33■□□□□ 0.36
COPS3-214ENST00000577246 PODNQ7Z5L7 613 aa17.32■□□□□ 0.36
COPS3-214ENST00000577246 RUNDC1Q96C34 613 aa17.32■□□□□ 0.36
COPS3-214ENST00000577246 MYOZ2Q9NPC6 264 aa17.32■□□□□ 0.36
COPS3-214ENST00000577246 PAPPA2Q9BXP8 1791 aa17.31■□□□□ 0.36
COPS3-214ENST00000577246 ASTN2O75129 1339 aaPredicted RBP17.31■□□□□ 0.36
COPS3-214ENST00000577246 XDHP47989 1333 aa17.31■□□□□ 0.36
COPS3-214ENST00000577246 HPS5Q9UPZ3 1129 aa17.31■□□□□ 0.36
COPS3-214ENST00000577246 TAF1P21675 1872 aa17.31■□□□□ 0.36
COPS3-214ENST00000577246 USP17L3A6NCW0 530 aa17.3■□□□□ 0.36
COPS3-214ENST00000577246 USP17L4A6NCW7 530 aa17.3■□□□□ 0.36
COPS3-214ENST00000577246 PDE8AO60658 829 aa17.3■□□□□ 0.36
COPS3-214ENST00000577246 ATP2B4P23634 1241 aa17.3■□□□□ 0.36
COPS3-214ENST00000577246 NF2P35240 595 aa17.3■□□□□ 0.36
COPS3-214ENST00000577246 WDR43Q15061 677 aaKnown RBP eCLIP17.3■□□□□ 0.36
COPS3-214ENST00000577246 DUSP27Q5VZP5 1158 aa17.3■□□□□ 0.36
COPS3-214ENST00000577246 USP17L1Q7RTZ2 530 aa17.3■□□□□ 0.36
COPS3-214ENST00000577246 ANKRD18AQ8IVF6 992 aa17.3■□□□□ 0.36
COPS3-214ENST00000577246 CCDC191Q8NCU4 936 aa17.3■□□□□ 0.36
COPS3-214ENST00000577246 CHMP4AQ9BY43 222 aa17.3■□□□□ 0.36
COPS3-214ENST00000577246 SEC31BQ9NQW1 1179 aa17.3■□□□□ 0.36
COPS3-214ENST00000577246 TRIM35Q9UPQ4 493 aa17.3■□□□□ 0.36
COPS3-214ENST00000577246 PCCAP05165 728 aaPredicted RBP17.29■□□□□ 0.36
COPS3-214ENST00000577246 NOM1Q5C9Z4 860 aaKnown RBP17.29■□□□□ 0.36
COPS3-214ENST00000577246 CCDC146Q8IYE0 955 aa17.29■□□□□ 0.36
COPS3-214ENST00000577246 OGFOD1Q8N543 542 aa17.29■□□□□ 0.36
COPS3-214ENST00000577246 GMLQ99445 158 aa17.29■□□□□ 0.36
COPS3-214ENST00000577246 AKAP11Q9UKA4 1901 aa17.28■□□□□ 0.36
COPS3-214ENST00000577246 MMP14P50281 582 aa17.28■□□□□ 0.36
COPS3-214ENST00000577246 TTLL12Q14166 644 aaPredicted RBP17.28■□□□□ 0.36
COPS3-214ENST00000577246 CDC5LQ99459 802 aaKnown RBP17.28■□□□□ 0.36
COPS3-214ENST00000577246 CWC25Q9NXE8 425 aaPredicted RBP17.28■□□□□ 0.36
COPS3-214ENST00000577246 MYO3BQ8WXR4 1341 aa17.27■□□□□ 0.36
COPS3-214ENST00000577246 DDX58O95786 925 aaKnown RBP17.27■□□□□ 0.36
COPS3-214ENST00000577246 SREBF2Q12772 1141 aa17.27■□□□□ 0.36
COPS3-214ENST00000577246 ZNF296Q8WUU4 475 aaPredicted RBP17.27■□□□□ 0.36
COPS3-214ENST00000577246 MYD88Q99836 296 aa17.27■□□□□ 0.36
COPS3-214ENST00000577246 TNRC18O15417 2968 aaPredicted RBP17.27■□□□□ 0.35
COPS3-214ENST00000577246 COL4A1P02462 1669 aa17.26■□□□□ 0.35
COPS3-214ENST00000577246 MYBBP1AQ9BQG0 1328 aaKnown RBP17.26■□□□□ 0.35
COPS3-214ENST00000577246 CALD1Q05682 793 aaKnown RBP17.26■□□□□ 0.35
COPS3-214ENST00000577246 MED23Q9ULK4 1368 aa17.26■□□□□ 0.35
COPS3-214ENST00000577246 UBE2Q2LH0YL09 131 aa17.25■□□□□ 0.35
COPS3-214ENST00000577246 TBC1D8O95759 1140 aa17.25■□□□□ 0.35
COPS3-214ENST00000577246 TM4SF4P48230 202 aa17.25■□□□□ 0.35
COPS3-214ENST00000577246 FBXO46Q6PJ61 603 aaPredicted RBP17.25■□□□□ 0.35
COPS3-214ENST00000577246 MBIPQ9NS73 344 aa17.25■□□□□ 0.35
COPS3-214ENST00000577246 SCN9AQ15858 1988 aa17.24■□□□□ 0.35
COPS3-214ENST00000577246 PDE4DIPQ5VU43 2346 aa17.24■□□□□ 0.35
COPS3-214ENST00000577246 GPR25O00155 361 aa17.24■□□□□ 0.35
COPS3-214ENST00000577246 ARMC9Q7Z3E5 817 aa17.24■□□□□ 0.35
COPS3-214ENST00000577246 CCDC85AQ96PX6 553 aaPredicted RBP17.24■□□□□ 0.35
COPS3-214ENST00000577246 POLR2AP24928 1970 aaKnown RBP17.23■□□□□ 0.35
COPS3-214ENST00000577246 ALDH1A1P00352 501 aa17.23■□□□□ 0.35
COPS3-214ENST00000577246 CTSWP56202 376 aa17.23■□□□□ 0.35
COPS3-214ENST00000577246 STRIP1Q5VSL9 837 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms