RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 ISCA1Q9BUE6 129 aa13.95□□□□□ -0.18
CALCOCO2-228ENST00000576582 ZC3H12CQ9C0D7 883 aaKnown RBP13.95□□□□□ -0.18
CALCOCO2-228ENST00000576582 EGFRP00533 1210 aa13.94□□□□□ -0.18
CALCOCO2-228ENST00000576582 RALBP1Q15311 655 aa13.94□□□□□ -0.18
CALCOCO2-228ENST00000576582 TBC1D16Q8TBP0 767 aa13.94□□□□□ -0.18
CALCOCO2-228ENST00000576582 CSRNP1Q96S65 589 aa13.94□□□□□ -0.18
CALCOCO2-228ENST00000576582 DBF4Q9UBU7 674 aaPredicted RBP13.94□□□□□ -0.18
CALCOCO2-228ENST00000576582 LRRC37AA6NMS7 1700 aa13.93□□□□□ -0.18
CALCOCO2-228ENST00000576582 DUOX1Q9NRD9 1551 aa13.93□□□□□ -0.18
CALCOCO2-228ENST00000576582 ADM5C9JUS6 153 aa13.93□□□□□ -0.18
CALCOCO2-228ENST00000576582 SLC10A3P09131 477 aa13.93□□□□□ -0.18
CALCOCO2-228ENST00000576582 FKBP1BP68106 108 aa13.93□□□□□ -0.18
CALCOCO2-228ENST00000576582 DOK7Q18PE1 504 aa13.93□□□□□ -0.18
CALCOCO2-228ENST00000576582 KIF4BQ2VIQ3 1234 aa13.93□□□□□ -0.18
CALCOCO2-228ENST00000576582 KCNQ5Q9NR82 932 aa13.93□□□□□ -0.18
CALCOCO2-228ENST00000576582 HYPKQ9NX55 129 aa13.93□□□□□ -0.18
CALCOCO2-228ENST00000576582 PODXL2Q9NZ53 605 aa13.93□□□□□ -0.18
CALCOCO2-228ENST00000576582 CHPF2Q9P2E5 772 aa13.93□□□□□ -0.18
CALCOCO2-228ENST00000576582 TNRC18O15417 2968 aaPredicted RBP13.93□□□□□ -0.18
CALCOCO2-228ENST00000576582 RTL9Q8NET4 1388 aa13.93□□□□□ -0.18
CALCOCO2-228ENST00000576582 G3V3G9 751 aa13.92□□□□□ -0.18
CALCOCO2-228ENST00000576582 DCAF8Q5TAQ9 597 aa13.92□□□□□ -0.18
CALCOCO2-228ENST00000576582 HDGFL1Q5TGJ6 251 aa13.92□□□□□ -0.18
CALCOCO2-228ENST00000576582 CTU1Q7Z7A3 348 aaKnown RBP13.92□□□□□ -0.18
CALCOCO2-228ENST00000576582 AGBL3Q8NEM8 1001 aa13.92□□□□□ -0.18
CALCOCO2-228ENST00000576582 ATP5J2-PTCD1G3V325 749 aa13.91□□□□□ -0.18
CALCOCO2-228ENST00000576582 IRS4O14654 1257 aaPredicted RBP13.91□□□□□ -0.18
CALCOCO2-228ENST00000576582 ZNF280AP59817 542 aaPredicted RBP13.91□□□□□ -0.18
CALCOCO2-228ENST00000576582 CDCA5Q96FF9 252 aa13.91□□□□□ -0.18
CALCOCO2-228ENST00000576582 GGA3Q9NZ52 723 aa13.91□□□□□ -0.18
CALCOCO2-228ENST00000576582 POLR2AP24928 1970 aaKnown RBP13.91□□□□□ -0.18
CALCOCO2-228ENST00000576582 SCARF1Q14162 830 aa13.9□□□□□ -0.18
CALCOCO2-228ENST00000576582 PKN2Q16513 984 aaKnown RBP13.9□□□□□ -0.18
CALCOCO2-228ENST00000576582 KRT24Q2M2I5 525 aa13.9□□□□□ -0.18
CALCOCO2-228ENST00000576582 ZBTB38Q8NAP3 1195 aaPredicted RBP13.9□□□□□ -0.18
CALCOCO2-228ENST00000576582 ANKIB1Q9P2G1 1089 aa13.9□□□□□ -0.18
CALCOCO2-228ENST00000576582 LAS1LQ9Y4W2 734 aaKnown RBP13.9□□□□□ -0.18
CALCOCO2-228ENST00000576582 TAF1P21675 1872 aa13.9□□□□□ -0.18
CALCOCO2-228ENST00000576582 DDX60Q8IY21 1712 aaKnown RBP13.9□□□□□ -0.18
CALCOCO2-228ENST00000576582 RSBN1LQ6PCB5 846 aaPredicted RBP13.89□□□□□ -0.19
CALCOCO2-228ENST00000576582 ZNF428Q96B54 188 aa13.89□□□□□ -0.19
CALCOCO2-228ENST00000576582 GGA1Q9UJY5 639 aa13.89□□□□□ -0.19
CALCOCO2-228ENST00000576582 ZNF609O15014 1411 aa13.89□□□□□ -0.19
CALCOCO2-228ENST00000576582 UFL1O94874 794 aa13.88□□□□□ -0.19
CALCOCO2-228ENST00000576582 USP17L8P0C7I0 530 aa13.88□□□□□ -0.19
CALCOCO2-228ENST00000576582 SOX10P56693 466 aa13.88□□□□□ -0.19
CALCOCO2-228ENST00000576582 NEUROD2Q15784 382 aa13.88□□□□□ -0.19
CALCOCO2-228ENST00000576582 RTL5Q5HYW3 569 aaPredicted RBP13.88□□□□□ -0.19
CALCOCO2-228ENST00000576582 ANGEL2Q5VTE6 544 aaKnown RBP13.88□□□□□ -0.19
CALCOCO2-228ENST00000576582 ANP32EQ9BTT0 268 aa13.88□□□□□ -0.19
CALCOCO2-228ENST00000576582 TRIM35Q9UPQ4 493 aa13.88□□□□□ -0.19
CALCOCO2-228ENST00000576582 MYBBP1AQ9BQG0 1328 aaKnown RBP13.88□□□□□ -0.19
CALCOCO2-228ENST00000576582 PITPNM2Q9BZ72 1349 aa13.88□□□□□ -0.19
CALCOCO2-228ENST00000576582 CCDC152Q4G0S7 254 aa13.87□□□□□ -0.19
CALCOCO2-228ENST00000576582 PRPF38BQ5VTL8 546 aaKnown RBP13.87□□□□□ -0.19
CALCOCO2-228ENST00000576582 RIC3Q7Z5B4 369 aa13.87□□□□□ -0.19
CALCOCO2-228ENST00000576582 PODNQ7Z5L7 613 aa13.87□□□□□ -0.19
CALCOCO2-228ENST00000576582 RASAL3Q86YV0 1011 aa13.87□□□□□ -0.19
CALCOCO2-228ENST00000576582 RUNDC1Q96C34 613 aa13.87□□□□□ -0.19
CALCOCO2-228ENST00000576582 GMLQ99445 158 aa13.87□□□□□ -0.19
CALCOCO2-228ENST00000576582 AKAP11Q9UKA4 1901 aa13.87□□□□□ -0.19
CALCOCO2-228ENST00000576582 ASTN2O75129 1339 aaPredicted RBP13.87□□□□□ -0.19
CALCOCO2-228ENST00000576582 GOLGA2Q08379 1002 aa13.86□□□□□ -0.19
CALCOCO2-228ENST00000576582 DUSP27Q5VZP5 1158 aa13.86□□□□□ -0.19
CALCOCO2-228ENST00000576582 MYOZ2Q9NPC6 264 aa13.86□□□□□ -0.19
CALCOCO2-228ENST00000576582 SEC31BQ9NQW1 1179 aa13.86□□□□□ -0.19
CALCOCO2-228ENST00000576582 HDAC9Q9UKV0 1011 aa13.86□□□□□ -0.19
CALCOCO2-228ENST00000576582 USP17L3A6NCW0 530 aa13.85□□□□□ -0.19
CALCOCO2-228ENST00000576582 USP17L4A6NCW7 530 aa13.85□□□□□ -0.19
CALCOCO2-228ENST00000576582 PDE8AO60658 829 aa13.85□□□□□ -0.19
CALCOCO2-228ENST00000576582 PCCAP05165 728 aaPredicted RBP13.85□□□□□ -0.19
CALCOCO2-228ENST00000576582 ATP2B4P23634 1241 aa13.85□□□□□ -0.19
CALCOCO2-228ENST00000576582 TM4SF4P48230 202 aa13.85□□□□□ -0.19
CALCOCO2-228ENST00000576582 MMP14P50281 582 aa13.85□□□□□ -0.19
CALCOCO2-228ENST00000576582 NOM1Q5C9Z4 860 aaKnown RBP13.85□□□□□ -0.19
CALCOCO2-228ENST00000576582 USP17L1Q7RTZ2 530 aa13.85□□□□□ -0.19
CALCOCO2-228ENST00000576582 CCDC191Q8NCU4 936 aa13.85□□□□□ -0.19
CALCOCO2-228ENST00000576582 CHMP4AQ9BY43 222 aa13.85□□□□□ -0.19
CALCOCO2-228ENST00000576582 HPS5Q9UPZ3 1129 aa13.85□□□□□ -0.19
CALCOCO2-228ENST00000576582 XDHP47989 1333 aa13.85□□□□□ -0.19
CALCOCO2-228ENST00000576582 ANKRD18AQ8IVF6 992 aa13.84□□□□□ -0.19
CALCOCO2-228ENST00000576582 CCDC146Q8IYE0 955 aa13.84□□□□□ -0.19
CALCOCO2-228ENST00000576582 MIER1Q8N108 512 aa13.84□□□□□ -0.19
CALCOCO2-228ENST00000576582 COL4A1P02462 1669 aa13.84□□□□□ -0.19
CALCOCO2-228ENST00000576582 OGFOD1Q8N543 542 aa13.83□□□□□ -0.2
CALCOCO2-228ENST00000576582 ZNF296Q8WUU4 475 aaPredicted RBP13.83□□□□□ -0.2
CALCOCO2-228ENST00000576582 SCN9AQ15858 1988 aa13.83□□□□□ -0.2
CALCOCO2-228ENST00000576582 UBE2Q2LH0YL09 131 aa13.82□□□□□ -0.2
CALCOCO2-228ENST00000576582 TBC1D8O95759 1140 aa13.82□□□□□ -0.2
CALCOCO2-228ENST00000576582 ZNF853P0CG23 659 aa13.82□□□□□ -0.2
CALCOCO2-228ENST00000576582 NF2P35240 595 aa13.82□□□□□ -0.2
CALCOCO2-228ENST00000576582 WDR43Q15061 677 aaKnown RBP eCLIP13.82□□□□□ -0.2
CALCOCO2-228ENST00000576582 CDC5LQ99459 802 aaKnown RBP13.82□□□□□ -0.2
CALCOCO2-228ENST00000576582 MYD88Q99836 296 aa13.82□□□□□ -0.2
CALCOCO2-228ENST00000576582 CWC25Q9NXE8 425 aaPredicted RBP13.82□□□□□ -0.2
CALCOCO2-228ENST00000576582 PAPPA2Q9BXP8 1791 aa13.81□□□□□ -0.2
CALCOCO2-228ENST00000576582 GPR25O00155 361 aa13.81□□□□□ -0.2
CALCOCO2-228ENST00000576582 SREBF2Q12772 1141 aa13.81□□□□□ -0.2
CALCOCO2-228ENST00000576582 MOB2Q70IA6 237 aa13.81□□□□□ -0.2
CALCOCO2-228ENST00000576582 CFHR5Q9BXR6 569 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms