RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 CASP7P55210 303 aa17.49■□□□□ 0.39
NDE1-211ENST00000576502 CXCL9Q07325 125 aa17.49■□□□□ 0.39
NDE1-211ENST00000576502 MRPL50Q8N5N7 158 aaKnown RBP17.49■□□□□ 0.39
NDE1-211ENST00000576502 SMC4Q9NTJ3 1288 aa17.49■□□□□ 0.39
NDE1-211ENST00000576502 POLLQ9UGP5 575 aa17.49■□□□□ 0.39
NDE1-211ENST00000576502 LTBP1Q14766 1721 aa17.49■□□□□ 0.39
NDE1-211ENST00000576502 RIMBP2O15034 1052 aa17.48■□□□□ 0.39
NDE1-211ENST00000576502 CSF1RP07333 972 aa17.48■□□□□ 0.39
NDE1-211ENST00000576502 ITGA6P23229 1130 aa17.48■□□□□ 0.39
NDE1-211ENST00000576502 IFIT5Q13325 482 aaKnown RBP17.48■□□□□ 0.39
NDE1-211ENST00000576502 USP50Q70EL3 339 aaPredicted RBP17.48■□□□□ 0.39
NDE1-211ENST00000576502 TRMT2AQ8IZ69 625 aaKnown RBP17.48■□□□□ 0.39
NDE1-211ENST00000576502 SSH1Q8WYL5 1049 aa17.48■□□□□ 0.39
NDE1-211ENST00000576502 CDCA7LQ96GN5 454 aa17.48■□□□□ 0.39
NDE1-211ENST00000576502 ANKRD2Q9GZV1 360 aa17.48■□□□□ 0.39
NDE1-211ENST00000576502 CHMP3Q9Y3E7 222 aa17.48■□□□□ 0.39
NDE1-211ENST00000576502 SPEF2Q9C093 1822 aa17.47■□□□□ 0.39
NDE1-211ENST00000576502 RAD17O75943 681 aa17.47■□□□□ 0.39
NDE1-211ENST00000576502 FAM161AQ3B820 660 aa17.47■□□□□ 0.39
NDE1-211ENST00000576502 MIER1Q8N108 512 aa17.47■□□□□ 0.39
NDE1-211ENST00000576502 DBNDD1Q9H9R9 158 aa17.47■□□□□ 0.39
NDE1-211ENST00000576502 GPRC5DQ9NZD1 345 aa17.47■□□□□ 0.39
NDE1-211ENST00000576502 ECE2O60344 883 aa17.46■□□□□ 0.39
NDE1-211ENST00000576502 SCNN1DP51172 638 aa17.46■□□□□ 0.39
NDE1-211ENST00000576502 TAF7LQ5H9L4 462 aa17.46■□□□□ 0.39
NDE1-211ENST00000576502 ADARB2Q9NS39 739 aaKnown RBP17.46■□□□□ 0.39
NDE1-211ENST00000576502 COL4A1P02462 1669 aa17.45■□□□□ 0.38
NDE1-211ENST00000576502 H7C1D1 291 aa17.45■□□□□ 0.38
NDE1-211ENST00000576502 RPS12P25398 132 aaKnown RBP17.45■□□□□ 0.38
NDE1-211ENST00000576502 GMPSP49915 693 aaPredicted RBP17.45■□□□□ 0.38
NDE1-211ENST00000576502 CCDC57Q2TAC2 916 aa17.45■□□□□ 0.38
NDE1-211ENST00000576502 MINPP1Q9UNW1 487 aa17.45■□□□□ 0.38
NDE1-211ENST00000576502 LEMD3Q9Y2U8 911 aa17.45■□□□□ 0.38
NDE1-211ENST00000576502 POTEIP0CG38 1075 aa17.44■□□□□ 0.38
NDE1-211ENST00000576502 POTEJP0CG39 1038 aa17.44■□□□□ 0.38
NDE1-211ENST00000576502 EPS15P42566 896 aa17.44■□□□□ 0.38
NDE1-211ENST00000576502 KCNJ4P48050 445 aa17.44■□□□□ 0.38
NDE1-211ENST00000576502 DPF2Q92785 391 aa17.44■□□□□ 0.38
NDE1-211ENST00000576502 MED23Q9ULK4 1368 aa17.43■□□□□ 0.38
NDE1-211ENST00000576502 YDJCA8MPS7 323 aa17.43■□□□□ 0.38
NDE1-211ENST00000576502 CCT4P50991 539 aaKnown RBP17.43■□□□□ 0.38
NDE1-211ENST00000576502 DOK7Q18PE1 504 aa17.43■□□□□ 0.38
NDE1-211ENST00000576502 LMBR1LQ6UX01 489 aa17.43■□□□□ 0.38
NDE1-211ENST00000576502 PODNQ7Z5L7 613 aa17.43■□□□□ 0.38
NDE1-211ENST00000576502 ADAMTSL1Q8N6G6 1762 aa17.43■□□□□ 0.38
NDE1-211ENST00000576502 PSMD14O00487 310 aa17.42■□□□□ 0.38
NDE1-211ENST00000576502 FOXO4P98177 505 aa17.42■□□□□ 0.38
NDE1-211ENST00000576502 HNRNPUQ00839 825 aaKnown RBP eCLIP17.42■□□□□ 0.38
NDE1-211ENST00000576502 CNTROBQ8N137 903 aa17.42■□□□□ 0.38
NDE1-211ENST00000576502 API5Q9BZZ5 524 aaKnown RBP17.42■□□□□ 0.38
NDE1-211ENST00000576502 CREBZFQ9NS37 354 aa17.42■□□□□ 0.38
NDE1-211ENST00000576502 HDAC5Q9UQL6 1122 aa17.42■□□□□ 0.38
NDE1-211ENST00000576502 KIF16BQ96L93 1317 aa17.42■□□□□ 0.38
NDE1-211ENST00000576502 BRPF1P55201 1214 aaPredicted RBP17.41■□□□□ 0.38
NDE1-211ENST00000576502 KLRG1Q96E93 195 aa17.41■□□□□ 0.38
NDE1-211ENST00000576502 GPR101Q96P66 508 aaPredicted RBP17.41■□□□□ 0.38
NDE1-211ENST00000576502 CNOT7Q9UIV1 285 aaKnown RBP17.41■□□□□ 0.38
NDE1-211ENST00000576502 UTYO14607 1347 aa17.41■□□□□ 0.38
NDE1-211ENST00000576502 ZC3H15Q8WU90 426 aaKnown RBP17.4■□□□□ 0.38
NDE1-211ENST00000576502 CNNM1Q9NRU3 951 aa17.4■□□□□ 0.38
NDE1-211ENST00000576502 ZNF804BA4D1E1 1349 aa17.4■□□□□ 0.38
NDE1-211ENST00000576502 PASKQ96RG2 1323 aa17.4■□□□□ 0.38
NDE1-211ENST00000576502 CHRNDQ07001 517 aa17.39■□□□□ 0.37
NDE1-211ENST00000576502 MAP1SQ66K74 1059 aaPredicted RBP17.39■□□□□ 0.37
NDE1-211ENST00000576502 LDHAL6AQ6ZMR3 332 aa17.39■□□□□ 0.37
NDE1-211ENST00000576502 MICALL2Q8IY33 904 aa17.39■□□□□ 0.37
NDE1-211ENST00000576502 AGBL3Q8NEM8 1001 aa17.39■□□□□ 0.37
NDE1-211ENST00000576502 COA1Q9GZY4 146 aa17.39■□□□□ 0.37
NDE1-211ENST00000576502 PSME4Q14997 1843 aa17.39■□□□□ 0.37
NDE1-211ENST00000576502 USP17L3A6NCW0 530 aa17.38■□□□□ 0.37
NDE1-211ENST00000576502 USP17L4A6NCW7 530 aa17.38■□□□□ 0.37
NDE1-211ENST00000576502 TMEM88BA6NKF7 163 aa17.38■□□□□ 0.37
NDE1-211ENST00000576502 IPO8O15397 1037 aaKnown RBP17.38■□□□□ 0.37
NDE1-211ENST00000576502 ITGBL1O95965 494 aaPredicted RBP17.38■□□□□ 0.37
NDE1-211ENST00000576502 VIL1P09327 827 aaKnown RBP17.38■□□□□ 0.37
NDE1-211ENST00000576502 NBPF7P0C2Y1 421 aaPredicted RBP17.38■□□□□ 0.37
NDE1-211ENST00000576502 USP17L1Q7RTZ2 530 aa17.38■□□□□ 0.37
NDE1-211ENST00000576502 DNAJC5GQ8N7S2 189 aa17.38■□□□□ 0.37
NDE1-211ENST00000576502 ZNF609O15014 1411 aa17.38■□□□□ 0.37
NDE1-211ENST00000576502 RARSP54136 660 aaKnown RBP17.37■□□□□ 0.37
NDE1-211ENST00000576502 EPHA10Q5JZY3 1008 aa17.37■□□□□ 0.37
NDE1-211ENST00000576502 ARHGAP45Q92619 1136 aa17.37■□□□□ 0.37
NDE1-211ENST00000576502 SUCLG2Q96I99 432 aa17.37■□□□□ 0.37
NDE1-211ENST00000576502 NOB1Q9ULX3 412 aaKnown RBP17.37■□□□□ 0.37
NDE1-211ENST00000576502 ZBTB12Q9Y330 459 aaPredicted RBP17.37■□□□□ 0.37
NDE1-211ENST00000576502 MYO3BQ8WXR4 1341 aa17.37■□□□□ 0.37
NDE1-211ENST00000576502 SCN9AQ15858 1988 aa17.37■□□□□ 0.37
NDE1-211ENST00000576502 CEP350Q5VT06 3117 aa17.36■□□□□ 0.37
NDE1-211ENST00000576502 MMP14P50281 582 aa17.36■□□□□ 0.37
NDE1-211ENST00000576502 HTRA3P83110 453 aa17.36■□□□□ 0.37
NDE1-211ENST00000576502 RSBN1LQ6PCB5 846 aaPredicted RBP17.36■□□□□ 0.37
NDE1-211ENST00000576502 RABL6Q3YEC7 729 aaPredicted RBP17.35■□□□□ 0.37
NDE1-211ENST00000576502 ZNF804AQ7Z570 1209 aa17.35■□□□□ 0.37
NDE1-211ENST00000576502 BICC1Q9H694 974 aaKnown RBP17.35■□□□□ 0.37
NDE1-211ENST00000576502 TRPM7Q96QT4 1865 aa17.35■□□□□ 0.37
NDE1-211ENST00000576502 UBTFL1P0CB47 393 aaPredicted RBP17.34■□□□□ 0.37
NDE1-211ENST00000576502 STRIP1Q5VSL9 837 aa17.34■□□□□ 0.37
NDE1-211ENST00000576502 MROH5Q6ZUA9 1318 aa17.34■□□□□ 0.37
NDE1-211ENST00000576502 C15orf52Q6ZUT6 534 aaKnown RBP17.34■□□□□ 0.37
NDE1-211ENST00000576502 CDC37L1Q7L3B6 337 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms