RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 RRAGCQ9HB90 399 aa11.02□□□□□ -0.65
SMG6-216ENST00000575176 BSDC1Q9NW68 430 aaPredicted RBP11.02□□□□□ -0.65
SMG6-216ENST00000575176 NOB1Q9ULX3 412 aaKnown RBP11.02□□□□□ -0.65
SMG6-216ENST00000575176 MINPP1Q9UNW1 487 aa11.02□□□□□ -0.65
SMG6-216ENST00000575176 POLR2AP24928 1970 aaKnown RBP11.02□□□□□ -0.65
SMG6-216ENST00000575176 PAPPA2Q9BXP8 1791 aa11.02□□□□□ -0.65
SMG6-216ENST00000575176 TOMM70O94826 608 aa11.01□□□□□ -0.65
SMG6-216ENST00000575176 RFX5P48382 616 aaPredicted RBP11.01□□□□□ -0.65
SMG6-216ENST00000575176 CXCL9Q07325 125 aa11.01□□□□□ -0.65
SMG6-216ENST00000575176 SLC4A10Q6U841 1118 aa11.01□□□□□ -0.65
SMG6-216ENST00000575176 LMBR1LQ6UX01 489 aa11.01□□□□□ -0.65
SMG6-216ENST00000575176 TXNRD3Q86VQ6 643 aa11.01□□□□□ -0.65
SMG6-216ENST00000575176 GPC2Q8N158 579 aa11.01□□□□□ -0.65
SMG6-216ENST00000575176 LARGE2Q8N3Y3 721 aa11.01□□□□□ -0.65
SMG6-216ENST00000575176 RBM46Q8TBY0 533 aaKnown RBP11.01□□□□□ -0.65
SMG6-216ENST00000575176 BICC1Q9H694 974 aaKnown RBP11.01□□□□□ -0.65
SMG6-216ENST00000575176 XDHP47989 1333 aa11.01□□□□□ -0.65
SMG6-216ENST00000575176 KIF16BQ96L93 1317 aa11.01□□□□□ -0.65
SMG6-216ENST00000575176 LAMB1P07942 1786 aa11□□□□□ -0.65
SMG6-216ENST00000575176 SHTN1A0MZ66 631 aa11□□□□□ -0.65
SMG6-216ENST00000575176 SNAP23O00161 211 aa11□□□□□ -0.65
SMG6-216ENST00000575176 HSP90B1P14625 803 aaKnown RBP11□□□□□ -0.65
SMG6-216ENST00000575176 INTS3Q68E01 1043 aaKnown RBP11□□□□□ -0.65
SMG6-216ENST00000575176 ANKRD18AQ8IVF6 992 aa11□□□□□ -0.65
SMG6-216ENST00000575176 ARHGAP45Q92619 1136 aa11□□□□□ -0.65
SMG6-216ENST00000575176 CDC5LQ99459 802 aaKnown RBP11□□□□□ -0.65
SMG6-216ENST00000575176 TAF1DQ9H5J8 278 aaPredicted RBP11□□□□□ -0.65
SMG6-216ENST00000575176 KCNQ5Q9NR82 932 aa11□□□□□ -0.65
SMG6-216ENST00000575176 NSFL1CQ9UNZ2 370 aaKnown RBP11□□□□□ -0.65
SMG6-216ENST00000575176 COL1A1P02452 1464 aaPredicted RBP11□□□□□ -0.65
SMG6-216ENST00000575176 UFL1O94874 794 aa10.99□□□□□ -0.65
SMG6-216ENST00000575176 VEGFAP15692 232 aaPredicted RBP10.99□□□□□ -0.65
SMG6-216ENST00000575176 NIM1KQ8IY84 436 aa10.99□□□□□ -0.65
SMG6-216ENST00000575176 VGLL2Q8N8G2 317 aa10.99□□□□□ -0.65
SMG6-216ENST00000575176 SUPT20HQ8NEM7 779 aa10.99□□□□□ -0.65
SMG6-216ENST00000575176 ZNF594Q96JF6 807 aaPredicted RBP10.99□□□□□ -0.65
SMG6-216ENST00000575176 MEIS3Q99687 375 aa10.99□□□□□ -0.65
SMG6-216ENST00000575176 DBNDD1Q9H9R9 158 aa10.99□□□□□ -0.65
SMG6-216ENST00000575176 ZNRF3Q9ULT6 936 aa10.99□□□□□ -0.65
SMG6-216ENST00000575176 ECE2O60344 883 aa10.98□□□□□ -0.65
SMG6-216ENST00000575176 RLBP1P12271 317 aa10.98□□□□□ -0.65
SMG6-216ENST00000575176 CHRNDQ07001 517 aa10.98□□□□□ -0.65
SMG6-216ENST00000575176 PUS3Q9BZE2 481 aaKnown RBP10.98□□□□□ -0.65
SMG6-216ENST00000575176 PASKQ96RG2 1323 aa10.98□□□□□ -0.65
SMG6-216ENST00000575176 EGFRP00533 1210 aa10.97□□□□□ -0.65
SMG6-216ENST00000575176 HSPA6P17066 643 aa10.97□□□□□ -0.65
SMG6-216ENST00000575176 EPS15P42566 896 aa10.97□□□□□ -0.65
SMG6-216ENST00000575176 CCT4P50991 539 aaKnown RBP10.97□□□□□ -0.65
SMG6-216ENST00000575176 WASHC4Q2M389 1173 aa10.97□□□□□ -0.65
SMG6-216ENST00000575176 ATF7IPQ6VMQ6 1270 aa10.97□□□□□ -0.65
SMG6-216ENST00000575176 C15orf52Q6ZUT6 534 aaKnown RBP10.97□□□□□ -0.65
SMG6-216ENST00000575176 JDP2Q8WYK2 163 aa10.97□□□□□ -0.65
SMG6-216ENST00000575176 GMLQ99445 158 aa10.97□□□□□ -0.65
SMG6-216ENST00000575176 API5Q9BZZ5 524 aaKnown RBP10.97□□□□□ -0.65
SMG6-216ENST00000575176 GPRC5DQ9NZD1 345 aa10.97□□□□□ -0.65
SMG6-216ENST00000575176 GGA1Q9UJY5 639 aa10.97□□□□□ -0.65
SMG6-216ENST00000575176 OTOFQ9HC10 1997 aa10.96□□□□□ -0.65
SMG6-216ENST00000575176 AKAP11Q9UKA4 1901 aa10.96□□□□□ -0.65
SMG6-216ENST00000575176 ANKRD18BA2A2Z9 1011 aa10.96□□□□□ -0.65
SMG6-216ENST00000575176 PSMD14O00487 310 aa10.96□□□□□ -0.65
SMG6-216ENST00000575176 RIMBP2O15034 1052 aa10.96□□□□□ -0.65
SMG6-216ENST00000575176 RAD17O75943 681 aa10.96□□□□□ -0.65
SMG6-216ENST00000575176 EPHX2P34913 555 aa10.96□□□□□ -0.65
SMG6-216ENST00000575176 GMPSP49915 693 aaPredicted RBP10.96□□□□□ -0.65
SMG6-216ENST00000575176 FSTL1Q12841 308 aa10.96□□□□□ -0.65
SMG6-216ENST00000575176 DOK7Q18PE1 504 aa10.96□□□□□ -0.65
SMG6-216ENST00000575176 DPY19L2Q6NUT2 758 aa10.96□□□□□ -0.65
SMG6-216ENST00000575176 KLHDC4Q8TBB5 520 aa10.96□□□□□ -0.65
SMG6-216ENST00000575176 C9orf78Q9NZ63 289 aaPredicted RBP10.96□□□□□ -0.65
SMG6-216ENST00000575176 RIPOR2Q9Y4F9 1068 aa10.96□□□□□ -0.65
SMG6-216ENST00000575176 MYO5AQ9Y4I1 1855 aaKnown RBP10.95□□□□□ -0.66
SMG6-216ENST00000575176 ZNF804BA4D1E1 1349 aa10.95□□□□□ -0.66
SMG6-216ENST00000575176 C6orf229H3BNL8 230 aa10.95□□□□□ -0.66
SMG6-216ENST00000575176 TAF5LO75529 589 aa10.95□□□□□ -0.66
SMG6-216ENST00000575176 ITGBL1O95965 494 aaPredicted RBP10.95□□□□□ -0.66
SMG6-216ENST00000575176 ATP2B4P23634 1241 aa10.95□□□□□ -0.66
SMG6-216ENST00000575176 IGHMBP2P38935 993 aaKnown RBP10.95□□□□□ -0.66
SMG6-216ENST00000575176 HIRAP54198 1017 aaPredicted RBP10.95□□□□□ -0.66
SMG6-216ENST00000575176 EIF6P56537 245 aaKnown RBP10.95□□□□□ -0.66
SMG6-216ENST00000575176 PTPN12Q05209 780 aaKnown RBP10.95□□□□□ -0.66
SMG6-216ENST00000575176 IFIT5Q13325 482 aaKnown RBP10.95□□□□□ -0.66
SMG6-216ENST00000575176 MTX1Q13505 466 aa10.95□□□□□ -0.66
SMG6-216ENST00000575176 LRRC24Q50LG9 513 aa10.95□□□□□ -0.66
SMG6-216ENST00000575176 CIAPIN1Q6FI81 312 aa10.95□□□□□ -0.66
SMG6-216ENST00000575176 TRPM4Q8TD43 1214 aa10.95□□□□□ -0.66
SMG6-216ENST00000575176 ANKIB1Q9P2G1 1089 aa10.95□□□□□ -0.66
SMG6-216ENST00000575176 HACL1Q9UJ83 578 aa10.95□□□□□ -0.66
SMG6-216ENST00000575176 MAST2Q6P0Q8 1798 aa10.95□□□□□ -0.66
SMG6-216ENST00000575176 IQCA1LA6NCM1 817 aa10.94□□□□□ -0.66
SMG6-216ENST00000575176 VIL1P09327 827 aaKnown RBP10.94□□□□□ -0.66
SMG6-216ENST00000575176 ATG9AQ7Z3C6 839 aa10.94□□□□□ -0.66
SMG6-216ENST00000575176 LDHDQ86WU2 507 aa10.94□□□□□ -0.66
SMG6-216ENST00000575176 TMEM57Q8N5G2 664 aa10.94□□□□□ -0.66
SMG6-216ENST00000575176 SMC1BQ8NDV3 1235 aa10.94□□□□□ -0.66
SMG6-216ENST00000575176 HELBQ8NG08 1087 aaPredicted RBP10.94□□□□□ -0.66
SMG6-216ENST00000575176 EYA3Q99504 573 aa10.94□□□□□ -0.66
SMG6-216ENST00000575176 LEMD3Q9Y2U8 911 aa10.94□□□□□ -0.66
SMG6-216ENST00000575176 ZBTB12Q9Y330 459 aaPredicted RBP10.94□□□□□ -0.66
SMG6-216ENST00000575176 LRRFIP2Q9Y608 721 aaKnown RBP10.94□□□□□ -0.66
SMG6-216ENST00000575176 GJA3Q9Y6H8 435 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms