RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 MRPL50Q8N5N7 158 aaKnown RBP25.07■■□□□ 1.6
SCARF1-208ENST00000574545 BSDC1Q9NW68 430 aaPredicted RBP25.07■■□□□ 1.6
SCARF1-208ENST00000574545 GMPSP49915 693 aaPredicted RBP25.06■■□□□ 1.6
SCARF1-208ENST00000574545 TNIP1Q15025 636 aa25.06■■□□□ 1.6
SCARF1-208ENST00000574545 USP50Q70EL3 339 aaPredicted RBP25.06■■□□□ 1.6
SCARF1-208ENST00000574545 DBNDD1Q9H9R9 158 aa25.06■■□□□ 1.6
SCARF1-208ENST00000574545 CLEC11AQ9Y240 323 aa25.06■■□□□ 1.6
SCARF1-208ENST00000574545 PCNTO95613 3336 aa25.05■■□□□ 1.6
SCARF1-208ENST00000574545 ANKIB1Q9P2G1 1089 aa25.05■■□□□ 1.6
SCARF1-208ENST00000574545 GGA1Q9UJY5 639 aa25.05■■□□□ 1.6
SCARF1-208ENST00000574545 MINPP1Q9UNW1 487 aa25.05■■□□□ 1.6
SCARF1-208ENST00000574545 XDHP47989 1333 aa25.05■■□□□ 1.6
SCARF1-208ENST00000574545 UFL1O94874 794 aa25.04■■□□□ 1.6
SCARF1-208ENST00000574545 DOK7Q18PE1 504 aa25.04■■□□□ 1.6
SCARF1-208ENST00000574545 MAP1SQ66K74 1059 aaPredicted RBP25.04■■□□□ 1.6
SCARF1-208ENST00000574545 CNTROBQ8N137 903 aa25.04■■□□□ 1.6
SCARF1-208ENST00000574545 JMYQ8N9B5 988 aa25.04■■□□□ 1.6
SCARF1-208ENST00000574545 ZC3H12CQ9C0D7 883 aaKnown RBP25.04■■□□□ 1.6
SCARF1-208ENST00000574545 KCNQ5Q9NR82 932 aa25.04■■□□□ 1.6
SCARF1-208ENST00000574545 ADARB2Q9NS39 739 aaKnown RBP25.04■■□□□ 1.6
SCARF1-208ENST00000574545 WTIPA6NIX2 430 aaPredicted RBP25.03■■□□□ 1.6
SCARF1-208ENST00000574545 ECE2O60344 883 aa25.03■■□□□ 1.6
SCARF1-208ENST00000574545 ITGA6P23229 1130 aa25.03■■□□□ 1.6
SCARF1-208ENST00000574545 FOXO4P98177 505 aa25.03■■□□□ 1.6
SCARF1-208ENST00000574545 PSMD14O00487 310 aa25.02■■□□□ 1.6
SCARF1-208ENST00000574545 ALDH1L1O75891 902 aa25.02■■□□□ 1.6
SCARF1-208ENST00000574545 ATP2B4P23634 1241 aa25.02■■□□□ 1.6
SCARF1-208ENST00000574545 FAM161AQ3B820 660 aa25.02■■□□□ 1.6
SCARF1-208ENST00000574545 SSH1Q8WYL5 1049 aa25.02■■□□□ 1.6
SCARF1-208ENST00000574545 CREBZFQ9NS37 354 aa25.02■■□□□ 1.6
SCARF1-208ENST00000574545 DPF2Q92785 391 aa25.01■■□□□ 1.59
SCARF1-208ENST00000574545 GRM8O00222 908 aa25■■□□□ 1.59
SCARF1-208ENST00000574545 EPHA10Q5JZY3 1008 aa25■■□□□ 1.59
SCARF1-208ENST00000574545 BCL2L13Q9BXK5 485 aa25■■□□□ 1.59
SCARF1-208ENST00000574545 SRCIN1Q9C0H9 1055 aa25■■□□□ 1.59
SCARF1-208ENST00000574545 PGAP2Q9UHJ9 254 aa25■■□□□ 1.59
SCARF1-208ENST00000574545 CNOT7Q9UIV1 285 aaKnown RBP25■■□□□ 1.59
SCARF1-208ENST00000574545 ZBTB12Q9Y330 459 aaPredicted RBP25■■□□□ 1.59
SCARF1-208ENST00000574545 SHTN1A0MZ66 631 aa24.99■■□□□ 1.59
SCARF1-208ENST00000574545 IGHMBP2P38935 993 aaKnown RBP24.99■■□□□ 1.59
SCARF1-208ENST00000574545 HIRAP54198 1017 aaPredicted RBP24.99■■□□□ 1.59
SCARF1-208ENST00000574545 SCN9AQ15858 1988 aa24.99■■□□□ 1.59
SCARF1-208ENST00000574545 VIL1P09327 827 aaKnown RBP24.98■■□□□ 1.59
SCARF1-208ENST00000574545 CCT4P50991 539 aaKnown RBP24.98■■□□□ 1.59
SCARF1-208ENST00000574545 SLC4A10Q6U841 1118 aa24.98■■□□□ 1.59
SCARF1-208ENST00000574545 PTPRCP08575 1304 aa24.97■■□□□ 1.59
SCARF1-208ENST00000574545 ALDH1L2Q3SY69 923 aa24.97■■□□□ 1.59
SCARF1-208ENST00000574545 UTYO14607 1347 aa24.96■■□□□ 1.59
SCARF1-208ENST00000574545 TRPM4Q8TD43 1214 aa24.96■■□□□ 1.59
SCARF1-208ENST00000574545 KAZALD1Q96I82 304 aa24.96■■□□□ 1.59
SCARF1-208ENST00000574545 SPEF2Q9C093 1822 aa24.96■■□□□ 1.59
SCARF1-208ENST00000574545 MED23Q9ULK4 1368 aa24.95■■□□□ 1.59
SCARF1-208ENST00000574545 ANKRD18BA2A2Z9 1011 aa24.95■■□□□ 1.58
SCARF1-208ENST00000574545 TMEM88BA6NKF7 163 aa24.95■■□□□ 1.58
SCARF1-208ENST00000574545 RPS12P25398 132 aaKnown RBP24.95■■□□□ 1.58
SCARF1-208ENST00000574545 LMBR1LQ6UX01 489 aa24.95■■□□□ 1.58
SCARF1-208ENST00000574545 MICALL2Q8IY33 904 aa24.95■■□□□ 1.58
SCARF1-208ENST00000574545 C9orf78Q9NZ63 289 aaPredicted RBP24.95■■□□□ 1.58
SCARF1-208ENST00000574545 LEMD3Q9Y2U8 911 aa24.95■■□□□ 1.58
SCARF1-208ENST00000574545 H7C1D1 291 aa24.94■■□□□ 1.58
SCARF1-208ENST00000574545 FMR1Q06787 632 aaKnown RBP eCLIP24.94■■□□□ 1.58
SCARF1-208ENST00000574545 PODNQ7Z5L7 613 aa24.94■■□□□ 1.58
SCARF1-208ENST00000574545 MIER1Q8N108 512 aa24.94■■□□□ 1.58
SCARF1-208ENST00000574545 ZC3H15Q8WU90 426 aaKnown RBP24.94■■□□□ 1.58
SCARF1-208ENST00000574545 MPHOSPH8Q99549 860 aa24.94■■□□□ 1.58
SCARF1-208ENST00000574545 CT47B1P0C2W7 299 aaPredicted RBP24.93■■□□□ 1.58
SCARF1-208ENST00000574545 NBPF7P0C2Y1 421 aaPredicted RBP24.93■■□□□ 1.58
SCARF1-208ENST00000574545 DIEXFQ68CQ4 756 aaKnown RBP24.93■■□□□ 1.58
SCARF1-208ENST00000574545 TXNRD3Q86VQ6 643 aa24.93■■□□□ 1.58
SCARF1-208ENST00000574545 ANKRD2Q9GZV1 360 aa24.93■■□□□ 1.58
SCARF1-208ENST00000574545 CHRNDQ07001 517 aa24.92■■□□□ 1.58
SCARF1-208ENST00000574545 IFIT5Q13325 482 aaKnown RBP24.92■■□□□ 1.58
SCARF1-208ENST00000574545 SUCLG2Q96I99 432 aa24.92■■□□□ 1.58
SCARF1-208ENST00000574545 ZNF609O15014 1411 aa24.92■■□□□ 1.58
SCARF1-208ENST00000574545 G3V3G9 751 aa24.91■■□□□ 1.58
SCARF1-208ENST00000574545 EGFRP00533 1210 aa24.91■■□□□ 1.58
SCARF1-208ENST00000574545 DCAF8Q5TAQ9 597 aa24.91■■□□□ 1.58
SCARF1-208ENST00000574545 SAMD7Q7Z3H4 446 aa24.91■■□□□ 1.58
SCARF1-208ENST00000574545 GMLQ99445 158 aa24.91■■□□□ 1.58
SCARF1-208ENST00000574545 ZNF804BA4D1E1 1349 aa24.9■■□□□ 1.58
SCARF1-208ENST00000574545 TRAF5O00463 557 aa24.9■■□□□ 1.58
SCARF1-208ENST00000574545 BRPF1P55201 1214 aaPredicted RBP24.9■■□□□ 1.58
SCARF1-208ENST00000574545 RSBN1LQ6PCB5 846 aaPredicted RBP24.9■■□□□ 1.58
SCARF1-208ENST00000574545 MKRN1Q9UHC7 482 aaKnown RBP24.9■■□□□ 1.58
SCARF1-208ENST00000574545 PSME4Q14997 1843 aa24.9■■□□□ 1.58
SCARF1-208ENST00000574545 CNTNAP1P78357 1384 aa24.9■■□□□ 1.58
SCARF1-208ENST00000574545 IRS2Q9Y4H2 1338 aa24.89■■□□□ 1.58
SCARF1-208ENST00000574545 CST9Q5W186 159 aa24.89■■□□□ 1.58
SCARF1-208ENST00000574545 AGBL3Q8NEM8 1001 aa24.89■■□□□ 1.58
SCARF1-208ENST00000574545 ZNF594Q96JF6 807 aaPredicted RBP24.89■■□□□ 1.58
SCARF1-208ENST00000574545 CHMP3Q9Y3E7 222 aa24.89■■□□□ 1.58
SCARF1-208ENST00000574545 KLRK1P26718 216 aa24.88■■□□□ 1.57
SCARF1-208ENST00000574545 CCDC57Q2TAC2 916 aa24.88■■□□□ 1.57
SCARF1-208ENST00000574545 RABL6Q3YEC7 729 aaPredicted RBP24.88■■□□□ 1.57
SCARF1-208ENST00000574545 COA1Q9GZY4 146 aa24.88■■□□□ 1.57
SCARF1-208ENST00000574545 SMC4Q9NTJ3 1288 aa24.88■■□□□ 1.57
SCARF1-208ENST00000574545 USP17L3A6NCW0 530 aa24.87■■□□□ 1.57
SCARF1-208ENST00000574545 USP17L4A6NCW7 530 aa24.87■■□□□ 1.57
SCARF1-208ENST00000574545 RASSF10A6NK89 507 aa24.87■■□□□ 1.57
SCARF1-208ENST00000574545 SNAP23O00161 211 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms