RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 TTC39BQ5VTQ0 682 aaPredicted RBP2.92□□□□□ -1.94
CHD3-217ENST00000574022 KIAA0319Q5VV43 1072 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 FBXL19Q6PCT2 694 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 LIAT1Q6ZQX7 453 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 SV2BQ7L1I2 683 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 BTLAQ7Z6A9 289 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 C3orf58Q8NDZ4 430 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 ITPKCQ96DU7 683 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 KLRG1Q96E93 195 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 HSH2DQ96JZ2 352 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 DNAJC7Q99615 494 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 TRIM56Q9BRZ2 755 aaKnown RBP2.92□□□□□ -1.94
CHD3-217ENST00000574022 CHRDQ9H2X0 955 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.92□□□□□ -1.94
CHD3-217ENST00000574022 ABI2Q9NYB9 513 aaPredicted RBP2.92□□□□□ -1.94
CHD3-217ENST00000574022 KLHL42Q9P2K6 505 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 PRKAG3Q9UGI9 489 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 AKAP2Q9Y2D5 859 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 PRKAB1Q9Y478 270 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 PPME1Q9Y570 386 aa2.92□□□□□ -1.94
CHD3-217ENST00000574022 SUPT16HQ9Y5B9 1047 aaKnown RBP2.92□□□□□ -1.94
CHD3-217ENST00000574022 A0A1W2PP55 124 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 SMAD7O15105 426 aaKnown RBP2.91□□□□□ -1.94
CHD3-217ENST00000574022 GREM1O60565 184 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 ZIC2O95409 532 aaPredicted RBP2.91□□□□□ -1.94
CHD3-217ENST00000574022 PARNO95453 639 aaKnown RBP2.91□□□□□ -1.94
CHD3-217ENST00000574022 PF4P02776 101 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 EDN3P14138 238 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 PHKA2P46019 1235 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 RNF144AP50876 292 aaPredicted RBP2.91□□□□□ -1.94
CHD3-217ENST00000574022 GYS2P54840 703 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 MAP3K10Q02779 954 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 FAM160A1Q05DH4 1040 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 APOBRQ0VD83 1088 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 RASA3Q14644 834 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 TNNI3KQ59H18 835 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 ARSJQ5FYB0 599 aaPredicted RBP2.91□□□□□ -1.94
CHD3-217ENST00000574022 PCNX4Q63HM2 1172 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 DTHD1Q6ZMT9 781 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 LRRC69Q6ZNQ3 347 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 NLRP13Q86W25 1043 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 HOMER1Q86YM7 354 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 GLIS3Q8NEA6 775 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 SH3TC2Q8TF17 1288 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 APPBP2Q92624 585 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 NKD1Q969G9 470 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 SRRTQ9BXP5 876 aaKnown RBP2.91□□□□□ -1.94
CHD3-217ENST00000574022 CCDC113Q9H0I3 377 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 ZFYVE1Q9HBF4 777 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 KCNQ5Q9NR82 932 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 FANCLQ9NW38 375 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 UBP1Q9NZI7 540 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 PPM1HQ9ULR3 514 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 TLR6Q9Y2C9 796 aa2.91□□□□□ -1.94
CHD3-217ENST00000574022 TMEM238LA0A1B0GVL6 79 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 FBXO24O75426 580 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 EGFRP00533 1210 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 EIF6P56537 245 aaKnown RBP2.9□□□□□ -1.95
CHD3-217ENST00000574022 WDR4P57081 412 aaKnown RBP2.9□□□□□ -1.95
CHD3-217ENST00000574022 IFRD2Q12894 506 aaPredicted RBP2.9□□□□□ -1.95
CHD3-217ENST00000574022 CAMK2GQ13555 558 aaPredicted RBP2.9□□□□□ -1.95
CHD3-217ENST00000574022 CTC1Q2NKJ3 1217 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 HSP90AB2PQ58FF8 381 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 ARSHQ5FYA8 562 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 TAF7LQ5H9L4 462 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 SNAP47Q5SQN1 464 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 LHX8Q68G74 356 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 PRPF40BQ6NWY9 871 aaKnown RBP2.9□□□□□ -1.95
CHD3-217ENST00000574022 TPTE2Q6XPS3 522 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 DHX37Q8IY37 1157 aaKnown RBP2.9□□□□□ -1.95
CHD3-217ENST00000574022 RPUSD2Q8IZ73 545 aaKnown RBP2.9□□□□□ -1.95
CHD3-217ENST00000574022 LILRB2Q8N423 598 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 GOLM1Q8NBJ4 401 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 PHC3Q8NDX5 983 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 TRPM4Q8TD43 1214 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 ANKRD24Q8TF21 1146 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 SHDQ96IW2 340 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 RHOVQ96L33 236 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 CEP63Q96MT8 703 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 CRBNQ96SW2 442 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 ZIC5Q96T25 663 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 KLF16Q9BXK1 252 aaPredicted RBP2.9□□□□□ -1.95
CHD3-217ENST00000574022 OXCT2Q9BYC2 517 aaPredicted RBP2.9□□□□□ -1.95
CHD3-217ENST00000574022 CEP44Q9C0F1 390 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 ZFAND3Q9H8U3 227 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 KANSL2Q9H9L4 492 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 C11orf16Q9NQ32 467 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 LATS2Q9NRM7 1088 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 DDX56Q9NY93 547 aaKnown RBP2.9□□□□□ -1.95
CHD3-217ENST00000574022 CHPF2Q9P2E5 772 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 SUGT1Q9Y2Z0 365 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 GJA3Q9Y6H8 435 aa2.9□□□□□ -1.95
CHD3-217ENST00000574022 TTBK1Q5TCY1 1321 aaPredicted RBP2.9□□□□□ -1.95
CHD3-217ENST00000574022 ROBO2Q9HCK4 1378 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 A0A1W2PNR3 127 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 ESYT3A0FGR9 886 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 PHF20L1A8MW92 1017 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 SPATA31C2B4DYI2 1134 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 PDPK1O15530 556 aa2.89□□□□□ -1.95
CHD3-217ENST00000574022 ITGBL1O95965 494 aaPredicted RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms