RNA–Protein interactions for RNA: ENST00000573990.1

SPNS2-207, Transcript of sphingolipid transporter 2, humanhuman

TSL 3

Gene SPNS2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-207ENST00000573990 DBNDD1Q9H9R9 158 aa24.7■■□□□ 1.54
SPNS2-207ENST00000573990 SMC4Q9NTJ3 1288 aa24.7■■□□□ 1.54
SPNS2-207ENST00000573990 PODXL2Q9NZ53 605 aa24.7■■□□□ 1.54
SPNS2-207ENST00000573990 CLEC11AQ9Y240 323 aa24.7■■□□□ 1.54
SPNS2-207ENST00000573990 MYH3P11055 1940 aa24.7■■□□□ 1.54
SPNS2-207ENST00000573990 UFL1O94874 794 aa24.69■■□□□ 1.54
SPNS2-207ENST00000573990 CSF1RP07333 972 aa24.69■■□□□ 1.54
SPNS2-207ENST00000573990 RARSP54136 660 aaKnown RBP24.69■■□□□ 1.54
SPNS2-207ENST00000573990 CIAPIN1Q6FI81 312 aa24.69■■□□□ 1.54
SPNS2-207ENST00000573990 RTL9Q8NET4 1388 aa24.68■■□□□ 1.54
SPNS2-207ENST00000573990 FOXO4P98177 505 aa24.68■■□□□ 1.54
SPNS2-207ENST00000573990 FAM161AQ3B820 660 aa24.68■■□□□ 1.54
SPNS2-207ENST00000573990 LDHDQ86WU2 507 aa24.68■■□□□ 1.54
SPNS2-207ENST00000573990 DNAJC5GQ8N7S2 189 aa24.68■■□□□ 1.54
SPNS2-207ENST00000573990 KCNQ5Q9NR82 932 aa24.68■■□□□ 1.54
SPNS2-207ENST00000573990 CEP350Q5VT06 3117 aa24.68■■□□□ 1.54
SPNS2-207ENST00000573990 KIF16BQ96L93 1317 aa24.67■■□□□ 1.54
SPNS2-207ENST00000573990 ITGA6P23229 1130 aa24.67■■□□□ 1.54
SPNS2-207ENST00000573990 LMOD1P29536 600 aaPredicted RBP24.67■■□□□ 1.54
SPNS2-207ENST00000573990 GMPSP49915 693 aaPredicted RBP24.67■■□□□ 1.54
SPNS2-207ENST00000573990 EPHA10Q5JZY3 1008 aa24.67■■□□□ 1.54
SPNS2-207ENST00000573990 EYA3Q99504 573 aa24.67■■□□□ 1.54
SPNS2-207ENST00000573990 SRCIN1Q9C0H9 1055 aa24.67■■□□□ 1.54
SPNS2-207ENST00000573990 BSDC1Q9NW68 430 aaPredicted RBP24.67■■□□□ 1.54
SPNS2-207ENST00000573990 GGA1Q9UJY5 639 aa24.67■■□□□ 1.54
SPNS2-207ENST00000573990 MINPP1Q9UNW1 487 aa24.67■■□□□ 1.54
SPNS2-207ENST00000573990 SPEF2Q9C093 1822 aa24.67■■□□□ 1.54
SPNS2-207ENST00000573990 GRM8O00222 908 aa24.66■■□□□ 1.54
SPNS2-207ENST00000573990 ECE2O60344 883 aa24.65■■□□□ 1.54
SPNS2-207ENST00000573990 ALDH1L1O75891 902 aa24.65■■□□□ 1.54
SPNS2-207ENST00000573990 PNMA8AQ86V59 439 aaPredicted RBP24.65■■□□□ 1.54
SPNS2-207ENST00000573990 ZC3H12CQ9C0D7 883 aaKnown RBP24.65■■□□□ 1.54
SPNS2-207ENST00000573990 C9orf78Q9NZ63 289 aaPredicted RBP24.65■■□□□ 1.54
SPNS2-207ENST00000573990 GPRC5DQ9NZD1 345 aa24.65■■□□□ 1.54
SPNS2-207ENST00000573990 XDHP47989 1333 aa24.64■■□□□ 1.54
SPNS2-207ENST00000573990 TNIP1Q15025 636 aa24.64■■□□□ 1.54
SPNS2-207ENST00000573990 MAP1SQ66K74 1059 aaPredicted RBP24.64■■□□□ 1.54
SPNS2-207ENST00000573990 ZBTB12Q9Y330 459 aaPredicted RBP24.64■■□□□ 1.54
SPNS2-207ENST00000573990 ADAMTSL1Q8N6G6 1762 aa24.63■■□□□ 1.53
SPNS2-207ENST00000573990 SHTN1A0MZ66 631 aa24.63■■□□□ 1.53
SPNS2-207ENST00000573990 IPO8O15397 1037 aaKnown RBP24.63■■□□□ 1.53
SPNS2-207ENST00000573990 IGHMBP2P38935 993 aaKnown RBP24.63■■□□□ 1.53
SPNS2-207ENST00000573990 ARHGAP45Q92619 1136 aa24.63■■□□□ 1.53
SPNS2-207ENST00000573990 CHMP3Q9Y3E7 222 aa24.63■■□□□ 1.53
SPNS2-207ENST00000573990 PSMD14O00487 310 aa24.62■■□□□ 1.53
SPNS2-207ENST00000573990 ATP2B4P23634 1241 aa24.62■■□□□ 1.53
SPNS2-207ENST00000573990 LMBR1LQ6UX01 489 aa24.62■■□□□ 1.53
SPNS2-207ENST00000573990 ANKRD18BA2A2Z9 1011 aa24.61■■□□□ 1.53
SPNS2-207ENST00000573990 ITGBL1O95965 494 aaPredicted RBP24.61■■□□□ 1.53
SPNS2-207ENST00000573990 SUCLG2Q96I99 432 aa24.61■■□□□ 1.53
SPNS2-207ENST00000573990 G3V3G9 751 aa24.6■■□□□ 1.53
SPNS2-207ENST00000573990 NBPF7P0C2Y1 421 aaPredicted RBP24.6■■□□□ 1.53
SPNS2-207ENST00000573990 DCAF8Q5TAQ9 597 aa24.6■■□□□ 1.53
SPNS2-207ENST00000573990 CNTROBQ8N137 903 aa24.6■■□□□ 1.53
SPNS2-207ENST00000573990 MPHOSPH8Q99549 860 aa24.6■■□□□ 1.53
SPNS2-207ENST00000573990 API5Q9BZZ5 524 aaKnown RBP24.6■■□□□ 1.53
SPNS2-207ENST00000573990 CCT4P50991 539 aaKnown RBP24.59■■□□□ 1.53
SPNS2-207ENST00000573990 KAZALD1Q96I82 304 aa24.59■■□□□ 1.53
SPNS2-207ENST00000573990 ZNF594Q96JF6 807 aaPredicted RBP24.59■■□□□ 1.53
SPNS2-207ENST00000573990 ADARB2Q9NS39 739 aaKnown RBP24.59■■□□□ 1.53
SPNS2-207ENST00000573990 CNOT7Q9UIV1 285 aaKnown RBP24.59■■□□□ 1.53
SPNS2-207ENST00000573990 PASKQ96RG2 1323 aa24.59■■□□□ 1.53
SPNS2-207ENST00000573990 IFIT5Q13325 482 aaKnown RBP24.58■■□□□ 1.53
SPNS2-207ENST00000573990 USP50Q70EL3 339 aaPredicted RBP24.58■■□□□ 1.53
SPNS2-207ENST00000573990 RCAN3Q9UKA8 241 aa24.57■■□□□ 1.52
SPNS2-207ENST00000573990 NOB1Q9ULX3 412 aaKnown RBP24.57■■□□□ 1.52
SPNS2-207ENST00000573990 SCN9AQ15858 1988 aa24.56■■□□□ 1.52
SPNS2-207ENST00000573990 HIRAP54198 1017 aaPredicted RBP24.56■■□□□ 1.52
SPNS2-207ENST00000573990 FMR1Q06787 632 aaKnown RBP eCLIP24.56■■□□□ 1.52
SPNS2-207ENST00000573990 CHRNDQ07001 517 aa24.56■■□□□ 1.52
SPNS2-207ENST00000573990 TXNRD3Q86VQ6 643 aa24.56■■□□□ 1.52
SPNS2-207ENST00000573990 MICALL2Q8IY33 904 aa24.56■■□□□ 1.52
SPNS2-207ENST00000573990 HELBQ8NG08 1087 aaPredicted RBP24.56■■□□□ 1.52
SPNS2-207ENST00000573990 KLRG1Q96E93 195 aa24.56■■□□□ 1.52
SPNS2-207ENST00000573990 UTYO14607 1347 aa24.56■■□□□ 1.52
SPNS2-207ENST00000573990 SNAP23O00161 211 aa24.55■■□□□ 1.52
SPNS2-207ENST00000573990 KLRK1P26718 216 aa24.55■■□□□ 1.52
SPNS2-207ENST00000573990 TRPM4Q8TD43 1214 aa24.55■■□□□ 1.52
SPNS2-207ENST00000573990 ANKRD2Q9GZV1 360 aa24.55■■□□□ 1.52
SPNS2-207ENST00000573990 TAF5LO75529 589 aa24.54■■□□□ 1.52
SPNS2-207ENST00000573990 BCAR3O75815 825 aa24.54■■□□□ 1.52
SPNS2-207ENST00000573990 CCDC57Q2TAC2 916 aa24.54■■□□□ 1.52
SPNS2-207ENST00000573990 LEMD3Q9Y2U8 911 aa24.54■■□□□ 1.52
SPNS2-207ENST00000573990 ZNF804BA4D1E1 1349 aa24.54■■□□□ 1.52
SPNS2-207ENST00000573990 H7C1D1 291 aa24.53■■□□□ 1.52
SPNS2-207ENST00000573990 VIL1P09327 827 aaKnown RBP24.53■■□□□ 1.52
SPNS2-207ENST00000573990 ZKSCAN2Q63HK3 967 aa24.53■■□□□ 1.52
SPNS2-207ENST00000573990 SAMD7Q7Z3H4 446 aa24.53■■□□□ 1.52
SPNS2-207ENST00000573990 DPF2Q92785 391 aa24.53■■□□□ 1.52
SPNS2-207ENST00000573990 USP44Q9H0E7 712 aa24.53■■□□□ 1.52
SPNS2-207ENST00000573990 MED23Q9ULK4 1368 aa24.53■■□□□ 1.52
SPNS2-207ENST00000573990 EGFRP00533 1210 aa24.52■■□□□ 1.52
SPNS2-207ENST00000573990 MS4A1P11836 297 aa24.52■■□□□ 1.52
SPNS2-207ENST00000573990 ATF7IPQ6VMQ6 1270 aa24.52■■□□□ 1.52
SPNS2-207ENST00000573990 BICC1Q9H694 974 aaKnown RBP24.52■■□□□ 1.52
SPNS2-207ENST00000573990 CREBZFQ9NS37 354 aa24.52■■□□□ 1.52
SPNS2-207ENST00000573990 TRAF5O00463 557 aa24.51■■□□□ 1.51
SPNS2-207ENST00000573990 TBC1D10BQ4KMP7 808 aaPredicted RBP24.51■■□□□ 1.51
SPNS2-207ENST00000573990 TAF7LQ5H9L4 462 aa24.51■■□□□ 1.51
SPNS2-207ENST00000573990 RBM26Q5T8P6 1007 aaKnown RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms