RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 CCDC191Q8NCU4 936 aa28.44■■■□□ 2.14
SNF8-216ENST00000573795 HHIPL1Q96JK4 782 aa28.44■■■□□ 2.14
SNF8-216ENST00000573795 PODXL2Q9NZ53 605 aa28.44■■■□□ 2.14
SNF8-216ENST00000573795 JARID2Q92833 1246 aaPredicted RBP28.43■■■□□ 2.14
SNF8-216ENST00000573795 EYA3Q99504 573 aa28.43■■■□□ 2.14
SNF8-216ENST00000573795 ZNF408Q9H9D4 720 aa28.43■■■□□ 2.14
SNF8-216ENST00000573795 PSME4Q14997 1843 aa28.43■■■□□ 2.14
SNF8-216ENST00000573795 MAP2K2P36507 400 aa28.42■■■□□ 2.14
SNF8-216ENST00000573795 TBC1D10BQ4KMP7 808 aaPredicted RBP28.42■■■□□ 2.14
SNF8-216ENST00000573795 USP48Q86UV5 1035 aa28.42■■■□□ 2.14
SNF8-216ENST00000573795 TSPYL6Q8N831 410 aa28.42■■■□□ 2.14
SNF8-216ENST00000573795 METTL22Q9BUU2 404 aaPredicted RBP28.42■■■□□ 2.14
SNF8-216ENST00000573795 RPS12P25398 132 aaKnown RBP28.41■■■□□ 2.14
SNF8-216ENST00000573795 CWC25Q9NXE8 425 aaPredicted RBP28.41■■■□□ 2.14
SNF8-216ENST00000573795 PDE8AO60658 829 aa28.4■■■□□ 2.14
SNF8-216ENST00000573795 CCDC152Q4G0S7 254 aa28.39■■■□□ 2.14
SNF8-216ENST00000573795 CCDC184Q52MB2 194 aa28.39■■■□□ 2.14
SNF8-216ENST00000573795 CCDC85AQ96PX6 553 aaPredicted RBP28.39■■■□□ 2.14
SNF8-216ENST00000573795 TSKSQ9UJT2 592 aa28.39■■■□□ 2.14
SNF8-216ENST00000573795 MYH3P11055 1940 aa28.38■■■□□ 2.13
SNF8-216ENST00000573795 UFL1O94874 794 aa28.38■■■□□ 2.13
SNF8-216ENST00000573795 HSP90B1P14625 803 aaKnown RBP28.38■■■□□ 2.13
SNF8-216ENST00000573795 CCDC30Q5VVM6 783 aa28.38■■■□□ 2.13
SNF8-216ENST00000573795 SPEF2Q9C093 1822 aa28.37■■■□□ 2.13
SNF8-216ENST00000573795 IGKV5-2P06315 115 aa28.37■■■□□ 2.13
SNF8-216ENST00000573795 VIL1P09327 827 aaKnown RBP28.37■■■□□ 2.13
SNF8-216ENST00000573795 TSR2Q969E8 191 aaKnown RBP28.37■■■□□ 2.13
SNF8-216ENST00000573795 BEGAINQ9BUH8 593 aa28.37■■■□□ 2.13
SNF8-216ENST00000573795 ZC3H12CQ9C0D7 883 aaKnown RBP28.37■■■□□ 2.13
SNF8-216ENST00000573795 MAP3K2Q9Y2U5 619 aa28.37■■■□□ 2.13
SNF8-216ENST00000573795 ZNF609O15014 1411 aa28.36■■■□□ 2.13
SNF8-216ENST00000573795 ABHD8Q96I13 439 aa28.36■■■□□ 2.13
SNF8-216ENST00000573795 ANKIB1Q9P2G1 1089 aa28.36■■■□□ 2.13
SNF8-216ENST00000573795 GGA1Q9UJY5 639 aa28.36■■■□□ 2.13
SNF8-216ENST00000573795 ADM5C9JUS6 153 aa28.35■■■□□ 2.13
SNF8-216ENST00000573795 DDX58O95786 925 aaKnown RBP28.35■■■□□ 2.13
SNF8-216ENST00000573795 RBM26Q5T8P6 1007 aaKnown RBP28.35■■■□□ 2.13
SNF8-216ENST00000573795 KRT26Q7Z3Y9 468 aa28.35■■■□□ 2.13
SNF8-216ENST00000573795 BRPF1P55201 1214 aaPredicted RBP28.34■■■□□ 2.13
SNF8-216ENST00000573795 ZIC5Q96T25 663 aa28.34■■■□□ 2.13
SNF8-216ENST00000573795 ZNF646O15015 1829 aaPredicted RBP28.34■■■□□ 2.13
SNF8-216ENST00000573795 PI4KAP2A4QPH2 592 aa28.33■■■□□ 2.13
SNF8-216ENST00000573795 KIF4BQ2VIQ3 1234 aa28.33■■■□□ 2.13
SNF8-216ENST00000573795 KSR2Q6VAB6 950 aa28.33■■■□□ 2.13
SNF8-216ENST00000573795 PI4KAP1Q8N8J0 262 aa28.33■■■□□ 2.13
SNF8-216ENST00000573795 ASTN2O75129 1339 aaPredicted RBP28.33■■■□□ 2.13
SNF8-216ENST00000573795 CTSWP56202 376 aa28.32■■■□□ 2.12
SNF8-216ENST00000573795 HUNKP57058 714 aa28.32■■■□□ 2.12
SNF8-216ENST00000573795 XDHP47989 1333 aa28.32■■■□□ 2.12
SNF8-216ENST00000573795 WTIPA6NIX2 430 aaPredicted RBP28.31■■■□□ 2.12
SNF8-216ENST00000573795 ANKRD18AQ8IVF6 992 aa28.31■■■□□ 2.12
SNF8-216ENST00000573795 CASP8AP2Q9UKL3 1982 aa28.3■■■□□ 2.12
SNF8-216ENST00000573795 ZNF280AP59817 542 aaPredicted RBP28.3■■■□□ 2.12
SNF8-216ENST00000573795 CCDC27Q2M243 656 aa28.3■■■□□ 2.12
SNF8-216ENST00000573795 G2E3Q7L622 706 aa28.3■■■□□ 2.12
SNF8-216ENST00000573795 DCPSQ96C86 337 aaKnown RBP28.3■■■□□ 2.12
SNF8-216ENST00000573795 CHMP4AQ9BY43 222 aa28.3■■■□□ 2.12
SNF8-216ENST00000573795 GGA3Q9NZ52 723 aa28.3■■■□□ 2.12
SNF8-216ENST00000573795 FAM155AB1AL88 458 aaPredicted RBP28.29■■■□□ 2.12
SNF8-216ENST00000573795 CA12O43570 354 aa28.29■■■□□ 2.12
SNF8-216ENST00000573795 CWF19L2Q2TBE0 894 aaKnown RBP28.29■■■□□ 2.12
SNF8-216ENST00000573795 RSBN1LQ6PCB5 846 aaPredicted RBP28.29■■■□□ 2.12
SNF8-216ENST00000573795 WWC1Q8IX03 1113 aa28.29■■■□□ 2.12
SNF8-216ENST00000573795 TTLL11Q8NHH1 800 aa28.29■■■□□ 2.12
SNF8-216ENST00000573795 GMLQ99445 158 aa28.29■■■□□ 2.12
SNF8-216ENST00000573795 GBA2Q9HCG7 927 aaPredicted RBP28.29■■■□□ 2.12
SNF8-216ENST00000573795 NOGQ13253 232 aa28.28■■■□□ 2.12
SNF8-216ENST00000573795 GREM2Q9H772 168 aa28.28■■■□□ 2.12
SNF8-216ENST00000573795 NEURL1BA8MQ27 555 aa28.27■■■□□ 2.12
SNF8-216ENST00000573795 G3V3G9 751 aa28.27■■■□□ 2.12
SNF8-216ENST00000573795 ATP2B4P23634 1241 aa28.27■■■□□ 2.12
SNF8-216ENST00000573795 DCAF8Q5TAQ9 597 aa28.27■■■□□ 2.12
SNF8-216ENST00000573795 AGBL3Q8NEM8 1001 aa28.27■■■□□ 2.12
SNF8-216ENST00000573795 TWISTNBQ3B726 338 aaPredicted RBP28.26■■■□□ 2.11
SNF8-216ENST00000573795 RGMBQ6NW40 437 aa28.26■■■□□ 2.11
SNF8-216ENST00000573795 CDC5LQ99459 802 aaKnown RBP28.26■■■□□ 2.11
SNF8-216ENST00000573795 STK31Q9BXU1 1019 aa28.25■■■□□ 2.11
SNF8-216ENST00000573795 MINPP1Q9UNW1 487 aa28.25■■■□□ 2.11
SNF8-216ENST00000573795 MED23Q9ULK4 1368 aa28.24■■■□□ 2.11
SNF8-216ENST00000573795 C2orf69Q8N8R5 385 aa28.24■■■□□ 2.11
SNF8-216ENST00000573795 BSDC1Q9NW68 430 aaPredicted RBP28.24■■■□□ 2.11
SNF8-216ENST00000573795 H7C1W4 665 aa28.23■■■□□ 2.11
SNF8-216ENST00000573795 NEXNQ0ZGT2 675 aa28.23■■■□□ 2.11
SNF8-216ENST00000573795 SCARF1Q14162 830 aa28.23■■■□□ 2.11
SNF8-216ENST00000573795 ANGEL2Q5VTE6 544 aaKnown RBP28.23■■■□□ 2.11
SNF8-216ENST00000573795 PODNQ7Z5L7 613 aa28.23■■■□□ 2.11
SNF8-216ENST00000573795 SULF1Q8IWU6 871 aa28.23■■■□□ 2.11
SNF8-216ENST00000573795 CDCA5Q96FF9 252 aa28.23■■■□□ 2.11
SNF8-216ENST00000573795 IL16Q14005 1332 aa28.22■■■□□ 2.11
SNF8-216ENST00000573795 USP17L3A6NCW0 530 aa28.22■■■□□ 2.11
SNF8-216ENST00000573795 USP17L4A6NCW7 530 aa28.22■■■□□ 2.11
SNF8-216ENST00000573795 USP17L1Q7RTZ2 530 aa28.22■■■□□ 2.11
SNF8-216ENST00000573795 SLC4A2P04920 1241 aa28.21■■■□□ 2.11
SNF8-216ENST00000573795 UBE3BQ7Z3V4 1068 aa28.21■■■□□ 2.11
SNF8-216ENST00000573795 MYOZ2Q9NPC6 264 aa28.21■■■□□ 2.11
SNF8-216ENST00000573795 CACNA1FO60840 1977 aa28.2■■■□□ 2.11
SNF8-216ENST00000573795 USP17L8P0C7I0 530 aa28.2■■■□□ 2.1
SNF8-216ENST00000573795 CASP7P55210 303 aa28.2■■■□□ 2.1
SNF8-216ENST00000573795 CCT4P50991 539 aaKnown RBP28.19■■■□□ 2.1
SNF8-216ENST00000573795 PLA2G12BQ9BX93 195 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms