RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 KIAA2012Q0VF49 1180 aa17.04■□□□□ 0.32
RPAIN-213ENST00000573577 FTSJ3Q8IY81 847 aaKnown RBP17.04■□□□□ 0.32
RPAIN-213ENST00000573577 POTECB2RU33 542 aa17.03■□□□□ 0.32
RPAIN-213ENST00000573577 CSF1RP07333 972 aa17.03■□□□□ 0.32
RPAIN-213ENST00000573577 MS4A1P11836 297 aa17.03■□□□□ 0.32
RPAIN-213ENST00000573577 EIF6P56537 245 aaKnown RBP17.03■□□□□ 0.32
RPAIN-213ENST00000573577 FAM161AQ3B820 660 aa17.03■□□□□ 0.32
RPAIN-213ENST00000573577 L3MBTL3Q96JM7 780 aaPredicted RBP17.03■□□□□ 0.32
RPAIN-213ENST00000573577 LTBP1Q14766 1721 aa17.03■□□□□ 0.32
RPAIN-213ENST00000573577 ITGA6P23229 1130 aa17.02■□□□□ 0.32
RPAIN-213ENST00000573577 FOXO4P98177 505 aa17.02■□□□□ 0.32
RPAIN-213ENST00000573577 INTS3Q68E01 1043 aaKnown RBP17.02■□□□□ 0.32
RPAIN-213ENST00000573577 GPC2Q8N158 579 aa17.02■□□□□ 0.32
RPAIN-213ENST00000573577 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.02■□□□□ 0.32
RPAIN-213ENST00000573577 RBM46Q8TBY0 533 aaKnown RBP17.02■□□□□ 0.32
RPAIN-213ENST00000573577 PODXL2Q9NZ53 605 aa17.02■□□□□ 0.32
RPAIN-213ENST00000573577 ANKIB1Q9P2G1 1089 aa17.02■□□□□ 0.32
RPAIN-213ENST00000573577 POLLQ9UGP5 575 aa17.02■□□□□ 0.32
RPAIN-213ENST00000573577 HDAC5Q9UQL6 1122 aa17.02■□□□□ 0.32
RPAIN-213ENST00000573577 UTYO14607 1347 aa17.01■□□□□ 0.31
RPAIN-213ENST00000573577 C6orf229H3BNL8 230 aa17.01■□□□□ 0.31
RPAIN-213ENST00000573577 WASHC4Q2M389 1173 aa17.01■□□□□ 0.31
RPAIN-213ENST00000573577 DZIP1LQ8IYY4 767 aaKnown RBP17.01■□□□□ 0.31
RPAIN-213ENST00000573577 TBC1D16Q8TBP0 767 aa17.01■□□□□ 0.31
RPAIN-213ENST00000573577 CLUAP1Q96AJ1 413 aa17.01■□□□□ 0.31
RPAIN-213ENST00000573577 BSDC1Q9NW68 430 aaPredicted RBP17.01■□□□□ 0.31
RPAIN-213ENST00000573577 ZNRF3Q9ULT6 936 aa17.01■□□□□ 0.31
RPAIN-213ENST00000573577 IQCA1LA6NCM1 817 aa17■□□□□ 0.31
RPAIN-213ENST00000573577 IGHMBP2P38935 993 aaKnown RBP17■□□□□ 0.31
RPAIN-213ENST00000573577 EYA3Q99504 573 aa17■□□□□ 0.31
RPAIN-213ENST00000573577 USP44Q9H0E7 712 aa17■□□□□ 0.31
RPAIN-213ENST00000573577 XDHP47989 1333 aa16.99■□□□□ 0.31
RPAIN-213ENST00000573577 UFL1O94874 794 aa16.99■□□□□ 0.31
RPAIN-213ENST00000573577 NBPF7P0C2Y1 421 aaPredicted RBP16.99■□□□□ 0.31
RPAIN-213ENST00000573577 EPHA10Q5JZY3 1008 aa16.99■□□□□ 0.31
RPAIN-213ENST00000573577 LMBR1LQ6UX01 489 aa16.99■□□□□ 0.31
RPAIN-213ENST00000573577 GGA1Q9UJY5 639 aa16.99■□□□□ 0.31
RPAIN-213ENST00000573577 GJA3Q9Y6H8 435 aa16.99■□□□□ 0.31
RPAIN-213ENST00000573577 ANKRD18BA2A2Z9 1011 aa16.98■□□□□ 0.31
RPAIN-213ENST00000573577 RIMBP2O15034 1052 aa16.98■□□□□ 0.31
RPAIN-213ENST00000573577 CAPN15O75808 1086 aa16.98■□□□□ 0.31
RPAIN-213ENST00000573577 UBTFL1P0CB47 393 aaPredicted RBP16.98■□□□□ 0.31
RPAIN-213ENST00000573577 IFIT5Q13325 482 aaKnown RBP16.98■□□□□ 0.31
RPAIN-213ENST00000573577 SUCLG2Q96I99 432 aa16.98■□□□□ 0.31
RPAIN-213ENST00000573577 GPR101Q96P66 508 aaPredicted RBP16.98■□□□□ 0.31
RPAIN-213ENST00000573577 MINPP1Q9UNW1 487 aa16.98■□□□□ 0.31
RPAIN-213ENST00000573577 CHMP3Q9Y3E7 222 aa16.98■□□□□ 0.31
RPAIN-213ENST00000573577 GNAI3P08754 354 aa16.97■□□□□ 0.31
RPAIN-213ENST00000573577 CXCL9Q07325 125 aa16.97■□□□□ 0.31
RPAIN-213ENST00000573577 FSTL1Q12841 308 aa16.97■□□□□ 0.31
RPAIN-213ENST00000573577 TMEM57Q8N5G2 664 aa16.97■□□□□ 0.31
RPAIN-213ENST00000573577 SMC1BQ8NDV3 1235 aa16.97■□□□□ 0.31
RPAIN-213ENST00000573577 MPHOSPH8Q99549 860 aa16.97■□□□□ 0.31
RPAIN-213ENST00000573577 HACL1Q9UJ83 578 aa16.97■□□□□ 0.31
RPAIN-213ENST00000573577 SPEF2Q9C093 1822 aa16.97■□□□□ 0.31
RPAIN-213ENST00000573577 SCN4AP35499 1836 aa16.96■□□□□ 0.31
RPAIN-213ENST00000573577 ATP2B4P23634 1241 aa16.96■□□□□ 0.31
RPAIN-213ENST00000573577 KAZALD1Q96I82 304 aa16.96■□□□□ 0.31
RPAIN-213ENST00000573577 ZC3H12CQ9C0D7 883 aaKnown RBP16.96■□□□□ 0.31
RPAIN-213ENST00000573577 TAF1DQ9H5J8 278 aaPredicted RBP16.96■□□□□ 0.31
RPAIN-213ENST00000573577 TNNQ9UQP3 1299 aa16.96■□□□□ 0.31
RPAIN-213ENST00000573577 YDJCA8MPS7 323 aa16.95■□□□□ 0.3
RPAIN-213ENST00000573577 HSPA6P17066 643 aa16.95■□□□□ 0.3
RPAIN-213ENST00000573577 CCDC57Q2TAC2 916 aa16.95■□□□□ 0.3
RPAIN-213ENST00000573577 CIAPIN1Q6FI81 312 aa16.95■□□□□ 0.3
RPAIN-213ENST00000573577 ITPRIPQ8IWB1 547 aa16.95■□□□□ 0.3
RPAIN-213ENST00000573577 DBNDD1Q9H9R9 158 aa16.95■□□□□ 0.3
RPAIN-213ENST00000573577 ECE2O60344 883 aa16.94■□□□□ 0.3
RPAIN-213ENST00000573577 RAD17O75943 681 aa16.94■□□□□ 0.3
RPAIN-213ENST00000573577 ATXN8OSP0DMR3 200 aa16.94■□□□□ 0.3
RPAIN-213ENST00000573577 LMOD1P29536 600 aaPredicted RBP16.94■□□□□ 0.3
RPAIN-213ENST00000573577 EPHX2P34913 555 aa16.94■□□□□ 0.3
RPAIN-213ENST00000573577 SCNN1DP51172 638 aa16.94■□□□□ 0.3
RPAIN-213ENST00000573577 TNIP1Q15025 636 aa16.94■□□□□ 0.3
RPAIN-213ENST00000573577 DOK7Q18PE1 504 aa16.94■□□□□ 0.3
RPAIN-213ENST00000573577 RABL6Q3YEC7 729 aaPredicted RBP16.94■□□□□ 0.3
RPAIN-213ENST00000573577 MEIS3Q99687 375 aa16.94■□□□□ 0.3
RPAIN-213ENST00000573577 ANKRD2Q9GZV1 360 aa16.94■□□□□ 0.3
RPAIN-213ENST00000573577 BICC1Q9H694 974 aaKnown RBP16.94■□□□□ 0.3
RPAIN-213ENST00000573577 MED23Q9ULK4 1368 aa16.93■□□□□ 0.3
RPAIN-213ENST00000573577 PLIN1O60240 522 aa16.93■□□□□ 0.3
RPAIN-213ENST00000573577 POTEIP0CG38 1075 aa16.93■□□□□ 0.3
RPAIN-213ENST00000573577 POTEJP0CG39 1038 aa16.93■□□□□ 0.3
RPAIN-213ENST00000573577 RLBP1P12271 317 aa16.93■□□□□ 0.3
RPAIN-213ENST00000573577 PDE3AQ14432 1141 aa16.93■□□□□ 0.3
RPAIN-213ENST00000573577 TAF7LQ5H9L4 462 aa16.93■□□□□ 0.3
RPAIN-213ENST00000573577 PANK1Q8TE04 598 aa16.93■□□□□ 0.3
RPAIN-213ENST00000573577 CHMP4BQ9H444 224 aaKnown RBP16.93■□□□□ 0.3
RPAIN-213ENST00000573577 LEMD3Q9Y2U8 911 aa16.93■□□□□ 0.3
RPAIN-213ENST00000573577 WTIPA6NIX2 430 aaPredicted RBP16.92■□□□□ 0.3
RPAIN-213ENST00000573577 G3V3G9 751 aa16.92■□□□□ 0.3
RPAIN-213ENST00000573577 GMPSP49915 693 aaPredicted RBP16.92■□□□□ 0.3
RPAIN-213ENST00000573577 CHRNDQ07001 517 aa16.92■□□□□ 0.3
RPAIN-213ENST00000573577 EAPPQ56P03 285 aaPredicted RBP16.92■□□□□ 0.3
RPAIN-213ENST00000573577 DCAF8Q5TAQ9 597 aa16.92■□□□□ 0.3
RPAIN-213ENST00000573577 PNMA8AQ86V59 439 aaPredicted RBP16.92■□□□□ 0.3
RPAIN-213ENST00000573577 ANKRD44Q8N8A2 993 aa16.92■□□□□ 0.3
RPAIN-213ENST00000573577 ZNF594Q96JF6 807 aaPredicted RBP16.92■□□□□ 0.3
RPAIN-213ENST00000573577 GNAI2P04899 355 aa16.91■□□□□ 0.3
RPAIN-213ENST00000573577 EPS15P42566 896 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms