RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 TBC1D10BQ4KMP7 808 aaPredicted RBP6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 CCDC184Q52MB2 194 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 C2orf27AQ580R0 203 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 OXLD1Q5BKU9 147 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 TTLL5Q6EMB2 1281 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 C16orf46Q6P387 395 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 NUDT18Q6ZVK8 323 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 RETREG3Q86VR2 466 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 KIAA0825Q8IV33 1275 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 FTSJ3Q8IY81 847 aaKnown RBP6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 CPXCR1Q8N123 301 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 THAP3Q8WTV1 239 aaPredicted RBP6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 TTC14Q96N46 770 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 CSRNP1Q96S65 589 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 NBPF3Q9H094 633 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 MUC3BQ9H195 1237 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 RBSNQ9H1K0 784 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 CAAP1Q9H8G2 361 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 PTPRHQ9HD43 1115 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 FAM198AQ9UFP1 575 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 ASAP1Q9ULH1 1129 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 GTF2A1LQ9UNN4 478 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 AKAP2Q9Y2D5 859 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 EFR3BQ9Y2G0 817 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 PCDHGA11Q9Y5H2 935 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 DYTNA2CJ06 578 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 NBPF26B4DH59 902 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 GOLIM4O00461 696 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 PDPK1O15530 556 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 CBFA2T2O43439 604 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 TCEA3O75764 348 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 VARSP26640 1264 aaKnown RBP6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 SOX5P35711 763 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 STAT3P40763 770 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 SOX9P48436 509 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 PPM1FP49593 454 aaPredicted RBP6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 PSEN2P49810 448 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 RAB27AP51159 221 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 PURAQ00577 322 aaKnown RBP6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 NFKB2Q00653 900 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 RASGRF1Q13972 1273 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 TNNI3KQ59H18 835 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 CT47A1Q5JQC4 288 aaPredicted RBP6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 IFFO2Q5TF58 517 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 DMRTA1Q5VZB9 504 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 KRT77Q7Z794 578 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 TSEN2Q8NCE0 465 aaKnown RBP6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 NGDNQ8NEJ9 315 aaKnown RBP6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 CPLX3Q8WVH0 158 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 ZDHHC16Q969W1 377 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 EMID1Q96A84 441 aaPredicted RBP6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 ZIM2Q9NZV7 527 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 STIM2Q9P246 746 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 LEMD3Q9Y2U8 911 aa6.21□□□□□ -1.42
TOPBP1-210ENST00000572787 E2F8A0AVK6 867 aa6.2□□□□□ -1.42
TOPBP1-210ENST00000572787 ESPNB1AK53 854 aa6.2□□□□□ -1.42
TOPBP1-210ENST00000572787 TRIM6-TRIM34B2RNG4 842 aa6.2□□□□□ -1.42
TOPBP1-210ENST00000572787 PRRT4C9JH25 899 aa6.2□□□□□ -1.42
TOPBP1-210ENST00000572787 WASLO00401 505 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-210ENST00000572787 AKAP10O43572 662 aa6.2□□□□□ -1.42
TOPBP1-210ENST00000572787 TERF1P54274 439 aa6.2□□□□□ -1.42
TOPBP1-210ENST00000572787 GLIPR1L2Q4G1C9 344 aa6.2□□□□□ -1.42
TOPBP1-210ENST00000572787 CCDC93Q567U6 631 aa6.2□□□□□ -1.42
TOPBP1-210ENST00000572787 FAM83BQ5T0W9 1011 aa6.2□□□□□ -1.42
TOPBP1-210ENST00000572787 NBPF11Q86T75 865 aa6.2□□□□□ -1.42
TOPBP1-210ENST00000572787 ENAHQ8N8S7 591 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-210ENST00000572787 ERP27Q96DN0 273 aa6.2□□□□□ -1.42
TOPBP1-210ENST00000572787 KCNH8Q96L42 1107 aa6.2□□□□□ -1.42
TOPBP1-210ENST00000572787 SELENOOQ9BVL4 669 aa6.2□□□□□ -1.42
TOPBP1-210ENST00000572787 FAM126AQ9BYI3 521 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-210ENST00000572787 NGRNQ9NPE2 291 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-210ENST00000572787 RABGAP1Q9Y3P9 1069 aa6.2□□□□□ -1.42
TOPBP1-210ENST00000572787 CTDP1Q9Y5B0 961 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-210ENST00000572787 ASMTLO95671 621 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 CT47B1P0C2W7 299 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 NEK2P51955 445 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 GEMIN4P57678 1058 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 SETDB1Q15047 1291 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 CDC37Q16543 378 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 GFOD2Q3B7J2 385 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 TM4SF20Q53R12 229 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 WWC2Q6AWC2 1192 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 NXNQ6DKJ4 435 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 ERAP2Q6P179 960 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 Q6ZNB5 142 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 ARMCX6Q7L4S7 300 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 DGKHQ86XP1 1220 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 THNSL2Q86YJ6 484 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 TCEAL8Q8IYN2 117 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 GJD3Q8N144 294 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 TTC30BQ8N4P2 665 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 ANKRD42Q8N9B4 389 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 PPHLN1Q8NEY8 458 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 SYMPKQ92797 1274 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 ZNF622Q969S3 477 aaKnown RBP eCLIP6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 MFSD3Q96ES6 412 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 COPRSQ9NQ92 184 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 GINM1Q9NU53 330 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 LUZP4Q9P127 313 aa6.19□□□□□ -1.42
TOPBP1-210ENST00000572787 A0A0G2JS52 829 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms