RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 TAOK3Q9H2K8 898 aa9.86□□□□□ -0.83
SMG6-211ENST00000572369 TLL2Q9Y6L7 1015 aa9.86□□□□□ -0.83
SMG6-211ENST00000572369 ABCC4O15439 1325 aa9.85□□□□□ -0.83
SMG6-211ENST00000572369 PTPRCP08575 1304 aa9.85□□□□□ -0.83
SMG6-211ENST00000572369 HOXA10P31260 410 aaPredicted RBP9.85□□□□□ -0.83
SMG6-211ENST00000572369 CTU1Q7Z7A3 348 aaKnown RBP9.85□□□□□ -0.83
SMG6-211ENST00000572369 RTKN2Q8IZC4 609 aa9.85□□□□□ -0.83
SMG6-211ENST00000572369 CCDC85AQ96PX6 553 aaPredicted RBP9.85□□□□□ -0.83
SMG6-211ENST00000572369 COL25A1Q9BXS0 654 aaPredicted RBP9.85□□□□□ -0.83
SMG6-211ENST00000572369 C9orf78Q9NZ63 289 aaPredicted RBP9.85□□□□□ -0.83
SMG6-211ENST00000572369 ZBED9Q6R2W3 1325 aa9.84□□□□□ -0.83
SMG6-211ENST00000572369 CDHR2Q9BYE9 1310 aa9.84□□□□□ -0.83
SMG6-211ENST00000572369 SPEF2Q9C093 1822 aa9.84□□□□□ -0.83
SMG6-211ENST00000572369 BBOX1O75936 387 aa9.84□□□□□ -0.83
SMG6-211ENST00000572369 GRAPQ13588 217 aa9.84□□□□□ -0.83
SMG6-211ENST00000572369 GCKRQ14397 625 aa9.84□□□□□ -0.83
SMG6-211ENST00000572369 SF3B3Q15393 1217 aaKnown RBP9.84□□□□□ -0.83
SMG6-211ENST00000572369 CCDC152Q4G0S7 254 aa9.84□□□□□ -0.83
SMG6-211ENST00000572369 CC2D2BQ6DHV5 1058 aa9.84□□□□□ -0.83
SMG6-211ENST00000572369 OLFM4Q6UX06 510 aa9.84□□□□□ -0.83
SMG6-211ENST00000572369 GRAPLQ8TC17 118 aaPredicted RBP9.84□□□□□ -0.83
SMG6-211ENST00000572369 SRCIN1Q9C0H9 1055 aa9.84□□□□□ -0.83
SMG6-211ENST00000572369 TRIOBPQ9H2D6 2365 aa9.83□□□□□ -0.84
SMG6-211ENST00000572369 H7C1W4 665 aa9.83□□□□□ -0.84
SMG6-211ENST00000572369 ALDH1L1O75891 902 aa9.83□□□□□ -0.84
SMG6-211ENST00000572369 EPHX2P34913 555 aa9.83□□□□□ -0.84
SMG6-211ENST00000572369 FKBP4Q02790 459 aaKnown RBP eCLIP9.83□□□□□ -0.84
SMG6-211ENST00000572369 GRIPAP1Q4V328 841 aa9.83□□□□□ -0.84
SMG6-211ENST00000572369 BEND3Q5T5X7 828 aa9.83□□□□□ -0.84
SMG6-211ENST00000572369 PNMA8AQ86V59 439 aaPredicted RBP9.83□□□□□ -0.84
SMG6-211ENST00000572369 C7orf43Q8WVR3 580 aa9.83□□□□□ -0.84
SMG6-211ENST00000572369 HACL1Q9UJ83 578 aa9.83□□□□□ -0.84
SMG6-211ENST00000572369 CHMP3Q9Y3E7 222 aa9.83□□□□□ -0.84
SMG6-211ENST00000572369 ATP6V0A2Q9Y487 856 aa9.83□□□□□ -0.84
SMG6-211ENST00000572369 KIF16BQ96L93 1317 aa9.82□□□□□ -0.84
SMG6-211ENST00000572369 LTBP3Q9NS15 1303 aa9.82□□□□□ -0.84
SMG6-211ENST00000572369 RARSP54136 660 aaKnown RBP9.82□□□□□ -0.84
SMG6-211ENST00000572369 CTSWP56202 376 aa9.82□□□□□ -0.84
SMG6-211ENST00000572369 FMR1Q06787 632 aaKnown RBP eCLIP9.82□□□□□ -0.84
SMG6-211ENST00000572369 DPP8Q6V1X1 898 aaPredicted RBP9.82□□□□□ -0.84
SMG6-211ENST00000572369 TMC4Q7Z404 712 aa9.82□□□□□ -0.84
SMG6-211ENST00000572369 SP8Q8IXZ3 490 aa9.82□□□□□ -0.84
SMG6-211ENST00000572369 SUPT20HQ8NEM7 779 aa9.82□□□□□ -0.84
SMG6-211ENST00000572369 FRAT1Q92837 279 aaPredicted RBP9.82□□□□□ -0.84
SMG6-211ENST00000572369 CDC5LQ99459 802 aaKnown RBP9.82□□□□□ -0.84
SMG6-211ENST00000572369 API5Q9BZZ5 524 aaKnown RBP9.82□□□□□ -0.84
SMG6-211ENST00000572369 ZNF277Q9NRM2 450 aaPredicted RBP9.82□□□□□ -0.84
SMG6-211ENST00000572369 NOB1Q9ULX3 412 aaKnown RBP9.82□□□□□ -0.84
SMG6-211ENST00000572369 GRM8O00222 908 aa9.81□□□□□ -0.84
SMG6-211ENST00000572369 IARSP41252 1262 aaKnown RBP9.81□□□□□ -0.84
SMG6-211ENST00000572369 RPS8P62241 208 aaKnown RBP9.81□□□□□ -0.84
SMG6-211ENST00000572369 CST9Q5W186 159 aa9.81□□□□□ -0.84
SMG6-211ENST00000572369 ANKRD18AQ8IVF6 992 aa9.81□□□□□ -0.84
SMG6-211ENST00000572369 JDP2Q8WYK2 163 aa9.81□□□□□ -0.84
SMG6-211ENST00000572369 CELF1Q92879 486 aaKnown RBP9.81□□□□□ -0.84
SMG6-211ENST00000572369 SEC31BQ9NQW1 1179 aa9.81□□□□□ -0.84
SMG6-211ENST00000572369 SAGE1Q9NXZ1 904 aa9.81□□□□□ -0.84
SMG6-211ENST00000572369 IPO8O15397 1037 aaKnown RBP9.8□□□□□ -0.84
SMG6-211ENST00000572369 LARGE2Q8N3Y3 721 aa9.8□□□□□ -0.84
SMG6-211ENST00000572369 TTLL11Q8NHH1 800 aa9.8□□□□□ -0.84
SMG6-211ENST00000572369 PSMD1Q99460 953 aa9.8□□□□□ -0.84
SMG6-211ENST00000572369 GREM2Q9H772 168 aa9.8□□□□□ -0.84
SMG6-211ENST00000572369 PRDM6Q9NQX0 595 aa9.8□□□□□ -0.84
SMG6-211ENST00000572369 ANKIB1Q9P2G1 1089 aa9.8□□□□□ -0.84
SMG6-211ENST00000572369 NSFL1CQ9UNZ2 370 aaKnown RBP9.8□□□□□ -0.84
SMG6-211ENST00000572369 SPTBN5Q9NRC6 3674 aaKnown RBP9.8□□□□□ -0.84
SMG6-211ENST00000572369 RANBP2P49792 3224 aaKnown RBP9.8□□□□□ -0.84
SMG6-211ENST00000572369 LRRC37AA6NMS7 1700 aa9.79□□□□□ -0.84
SMG6-211ENST00000572369 TRPM7Q96QT4 1865 aa9.79□□□□□ -0.84
SMG6-211ENST00000572369 G3V3G9 751 aa9.79□□□□□ -0.84
SMG6-211ENST00000572369 C6orf229H3BNL8 230 aa9.79□□□□□ -0.84
SMG6-211ENST00000572369 PPIP5K2O43314 1243 aa9.79□□□□□ -0.84
SMG6-211ENST00000572369 IGHMBP2P38935 993 aaKnown RBP9.79□□□□□ -0.84
SMG6-211ENST00000572369 CCT4P50991 539 aaKnown RBP9.79□□□□□ -0.84
SMG6-211ENST00000572369 TAF7LQ5H9L4 462 aa9.79□□□□□ -0.84
SMG6-211ENST00000572369 DCAF8Q5TAQ9 597 aa9.79□□□□□ -0.84
SMG6-211ENST00000572369 SAPCD2Q86UD0 394 aa9.79□□□□□ -0.84
SMG6-211ENST00000572369 SLC51AQ86UW1 340 aa9.79□□□□□ -0.84
SMG6-211ENST00000572369 HHIPL1Q96JK4 782 aa9.79□□□□□ -0.84
SMG6-211ENST00000572369 YTHDC1Q96MU7 727 aaKnown RBP9.79□□□□□ -0.84
SMG6-211ENST00000572369 MPHOSPH8Q99549 860 aa9.79□□□□□ -0.84
SMG6-211ENST00000572369 PLA2G12BQ9BX93 195 aa9.79□□□□□ -0.84
SMG6-211ENST00000572369 ANKRD18BA2A2Z9 1011 aa9.78□□□□□ -0.84
SMG6-211ENST00000572369 BCAR3O75815 825 aa9.78□□□□□ -0.84
SMG6-211ENST00000572369 ITGA6P23229 1130 aa9.78□□□□□ -0.84
SMG6-211ENST00000572369 CASP7P55210 303 aa9.78□□□□□ -0.84
SMG6-211ENST00000572369 EIF6P56537 245 aaKnown RBP9.78□□□□□ -0.84
SMG6-211ENST00000572369 NOGQ13253 232 aa9.78□□□□□ -0.84
SMG6-211ENST00000572369 IFIT5Q13325 482 aaKnown RBP9.78□□□□□ -0.84
SMG6-211ENST00000572369 PKN2Q16513 984 aaKnown RBP9.78□□□□□ -0.84
SMG6-211ENST00000572369 AOC3Q16853 763 aa9.78□□□□□ -0.84
SMG6-211ENST00000572369 CCDC57Q2TAC2 916 aa9.78□□□□□ -0.84
SMG6-211ENST00000572369 LMBR1LQ6UX01 489 aa9.78□□□□□ -0.84
SMG6-211ENST00000572369 NIM1KQ8IY84 436 aa9.78□□□□□ -0.84
SMG6-211ENST00000572369 BRCA2P51587 3418 aa9.78□□□□□ -0.84
SMG6-211ENST00000572369 COL4A1P02462 1669 aa9.77□□□□□ -0.84
SMG6-211ENST00000572369 VCANP13611 3396 aa9.77□□□□□ -0.84
SMG6-211ENST00000572369 RIMBP2O15034 1052 aa9.77□□□□□ -0.85
SMG6-211ENST00000572369 NBPF7P0C2Y1 421 aaPredicted RBP9.77□□□□□ -0.85
SMG6-211ENST00000572369 GPSM2P81274 684 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms