RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 KCNJ4P48050 445 aa11.7□□□□□ -0.54
NPLOC4-208ENST00000572351 GPR162Q16538 588 aa11.7□□□□□ -0.54
NPLOC4-208ENST00000572351 CCDC93Q567U6 631 aa11.7□□□□□ -0.54
NPLOC4-208ENST00000572351 HSP90AB4PQ58FF6 505 aa11.7□□□□□ -0.54
NPLOC4-208ENST00000572351 CC2D2BQ6DHV5 1058 aa11.7□□□□□ -0.54
NPLOC4-208ENST00000572351 SIRT2Q8IXJ6 389 aa11.7□□□□□ -0.54
NPLOC4-208ENST00000572351 SP8Q8IXZ3 490 aa11.7□□□□□ -0.54
NPLOC4-208ENST00000572351 ANKRD2Q9GZV1 360 aa11.7□□□□□ -0.54
NPLOC4-208ENST00000572351 RWDD1Q9H446 243 aaPredicted RBP11.7□□□□□ -0.54
NPLOC4-208ENST00000572351 FBXO3Q9UK99 471 aa11.7□□□□□ -0.54
NPLOC4-208ENST00000572351 NSFL1CQ9UNZ2 370 aaKnown RBP11.7□□□□□ -0.54
NPLOC4-208ENST00000572351 DDX60Q8IY21 1712 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-208ENST00000572351 MROH5Q6ZUA9 1318 aa11.69□□□□□ -0.54
NPLOC4-208ENST00000572351 APBB1O00213 710 aa11.69□□□□□ -0.54
NPLOC4-208ENST00000572351 CIAO1O76071 339 aa11.69□□□□□ -0.54
NPLOC4-208ENST00000572351 CHRNDQ07001 517 aa11.69□□□□□ -0.54
NPLOC4-208ENST00000572351 C1QBPQ07021 282 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-208ENST00000572351 LRRC24Q50LG9 513 aa11.69□□□□□ -0.54
NPLOC4-208ENST00000572351 OLFM4Q6UX06 510 aa11.69□□□□□ -0.54
NPLOC4-208ENST00000572351 DPP8Q6V1X1 898 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-208ENST00000572351 PUS3Q9BZE2 481 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-208ENST00000572351 MINPP1Q9UNW1 487 aa11.69□□□□□ -0.54
NPLOC4-208ENST00000572351 EXOC6BQ9Y2D4 811 aa11.69□□□□□ -0.54
NPLOC4-208ENST00000572351 HDAC1Q13547 482 aaPredicted RBP11.68□□□□□ -0.54
NPLOC4-208ENST00000572351 GRIPAP1Q4V328 841 aa11.68□□□□□ -0.54
NPLOC4-208ENST00000572351 ERICH6BQ5W0A0 696 aa11.68□□□□□ -0.54
NPLOC4-208ENST00000572351 ERC1Q8IUD2 1116 aa11.68□□□□□ -0.54
NPLOC4-208ENST00000572351 RTKN2Q8IZC4 609 aa11.68□□□□□ -0.54
NPLOC4-208ENST00000572351 MPNDQ8N594 471 aa11.68□□□□□ -0.54
NPLOC4-208ENST00000572351 BCL11AQ9H165 835 aa11.68□□□□□ -0.54
NPLOC4-208ENST00000572351 CEP126Q9P2H0 1117 aa11.68□□□□□ -0.54
NPLOC4-208ENST00000572351 ZBTB47Q9UFB7 747 aaPredicted RBP11.68□□□□□ -0.54
NPLOC4-208ENST00000572351 LAMB2P55268 1798 aa11.68□□□□□ -0.54
NPLOC4-208ENST00000572351 XDHP47989 1333 aa11.67□□□□□ -0.54
NPLOC4-208ENST00000572351 C6orf229H3BNL8 230 aa11.67□□□□□ -0.54
NPLOC4-208ENST00000572351 TAF5LO75529 589 aa11.67□□□□□ -0.54
NPLOC4-208ENST00000572351 UFL1O94874 794 aa11.67□□□□□ -0.54
NPLOC4-208ENST00000572351 GPSM2P81274 684 aa11.67□□□□□ -0.54
NPLOC4-208ENST00000572351 ARHGAP27Q6ZUM4 889 aa11.67□□□□□ -0.54
NPLOC4-208ENST00000572351 HELBQ8NG08 1087 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-208ENST00000572351 C7orf43Q8WVR3 580 aa11.67□□□□□ -0.54
NPLOC4-208ENST00000572351 CCDC136Q96JN2 1154 aa11.67□□□□□ -0.54
NPLOC4-208ENST00000572351 GGA1Q9UJY5 639 aa11.67□□□□□ -0.54
NPLOC4-208ENST00000572351 NOP58Q9Y2X3 529 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-208ENST00000572351 RIPOR2Q9Y4F9 1068 aa11.67□□□□□ -0.54
NPLOC4-208ENST00000572351 COL11A2P13942 1736 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-208ENST00000572351 ANKRD31Q8N7Z5 1873 aa11.66□□□□□ -0.54
NPLOC4-208ENST00000572351 GRIN3BO60391 1043 aa11.66□□□□□ -0.54
NPLOC4-208ENST00000572351 RAB11FIP3O75154 756 aa11.66□□□□□ -0.54
NPLOC4-208ENST00000572351 YBX3P16989 372 aaKnown RBP eCLIP11.66□□□□□ -0.541e-7■□□□□ 9.7
NPLOC4-208ENST00000572351 ATP2B4P23634 1241 aa11.66□□□□□ -0.54
NPLOC4-208ENST00000572351 ATG9AQ7Z3C6 839 aa11.66□□□□□ -0.54
NPLOC4-208ENST00000572351 SLC51AQ86UW1 340 aa11.66□□□□□ -0.54
NPLOC4-208ENST00000572351 SUPT20HQ8NEM7 779 aa11.66□□□□□ -0.54
NPLOC4-208ENST00000572351 TAOK3Q9H2K8 898 aa11.66□□□□□ -0.54
NPLOC4-208ENST00000572351 DCTPP1Q9H773 170 aa11.66□□□□□ -0.54
NPLOC4-208ENST00000572351 ZNF804BA4D1E1 1349 aa11.65□□□□□ -0.54
NPLOC4-208ENST00000572351 PDE8BO95263 885 aa11.65□□□□□ -0.54
NPLOC4-208ENST00000572351 TFCP2Q12800 502 aa11.65□□□□□ -0.54
NPLOC4-208ENST00000572351 PUM3Q15397 648 aaKnown RBP11.65□□□□□ -0.54
NPLOC4-208ENST00000572351 GCC1Q96CN9 775 aa11.65□□□□□ -0.54
NPLOC4-208ENST00000572351 KIF1BPQ96EK5 621 aa11.65□□□□□ -0.54
NPLOC4-208ENST00000572351 EYA3Q99504 573 aa11.65□□□□□ -0.54
NPLOC4-208ENST00000572351 PODXL2Q9NZ53 605 aa11.65□□□□□ -0.54
NPLOC4-208ENST00000572351 AKAP2Q9Y2D5 859 aa11.65□□□□□ -0.54
NPLOC4-208ENST00000572351 LEMD3Q9Y2U8 911 aa11.65□□□□□ -0.54
NPLOC4-208ENST00000572351 KIF13BQ9NQT8 1826 aa11.65□□□□□ -0.55
NPLOC4-208ENST00000572351 SASH1O94885 1247 aa11.64□□□□□ -0.55
NPLOC4-208ENST00000572351 IGHDP01880 384 aa11.64□□□□□ -0.55
NPLOC4-208ENST00000572351 IFIT1P09914 478 aaKnown RBP11.64□□□□□ -0.55
NPLOC4-208ENST00000572351 SLC5A1P13866 664 aa11.64□□□□□ -0.55
NPLOC4-208ENST00000572351 FKBP4Q02790 459 aaKnown RBP eCLIP11.64□□□□□ -0.55
NPLOC4-208ENST00000572351 ATP2B3Q16720 1220 aa11.64□□□□□ -0.55
NPLOC4-208ENST00000572351 B4GALNT3Q6L9W6 998 aa11.64□□□□□ -0.55
NPLOC4-208ENST00000572351 TBC1D16Q8TBP0 767 aa11.64□□□□□ -0.55
NPLOC4-208ENST00000572351 RHPN1Q8TCX5 695 aa11.64□□□□□ -0.55
NPLOC4-208ENST00000572351 LRRCC1Q9C099 1032 aa11.64□□□□□ -0.55
NPLOC4-208ENST00000572351 PPP4R2Q9NY27 417 aa11.64□□□□□ -0.55
NPLOC4-208ENST00000572351 COL4A1P02462 1669 aa11.63□□□□□ -0.55
NPLOC4-208ENST00000572351 G3V3G9 751 aa11.63□□□□□ -0.55
NPLOC4-208ENST00000572351 RIMBP2O15034 1052 aa11.63□□□□□ -0.55
NPLOC4-208ENST00000572351 UBE4AQ14139 1066 aa11.63□□□□□ -0.55
NPLOC4-208ENST00000572351 WASHC4Q2M389 1173 aa11.63□□□□□ -0.55
NPLOC4-208ENST00000572351 DCAF8Q5TAQ9 597 aa11.63□□□□□ -0.55
NPLOC4-208ENST00000572351 CLASRPQ8N2M8 674 aaKnown RBP11.63□□□□□ -0.55
NPLOC4-208ENST00000572351 VGLL2Q8N8G2 317 aa11.63□□□□□ -0.55
NPLOC4-208ENST00000572351 LPIN2Q92539 896 aa11.63□□□□□ -0.55
NPLOC4-208ENST00000572351 NEUROD6Q96NK8 337 aa11.63□□□□□ -0.55
NPLOC4-208ENST00000572351 GPR101Q96P66 508 aaPredicted RBP11.63□□□□□ -0.55
NPLOC4-208ENST00000572351 PSMD1Q99460 953 aa11.63□□□□□ -0.55
NPLOC4-208ENST00000572351 ZC3H12CQ9C0D7 883 aaKnown RBP11.63□□□□□ -0.55
NPLOC4-208ENST00000572351 IL1RAPL2Q9NP60 686 aa11.63□□□□□ -0.55
NPLOC4-208ENST00000572351 POLLQ9UGP5 575 aa11.63□□□□□ -0.55
NPLOC4-208ENST00000572351 A0A1B0GUL7 405 aa11.62□□□□□ -0.55
NPLOC4-208ENST00000572351 SNAP23O00161 211 aa11.62□□□□□ -0.55
NPLOC4-208ENST00000572351 NFKBIEO00221 500 aa11.62□□□□□ -0.55
NPLOC4-208ENST00000572351 PPIP5K2O43314 1243 aa11.62□□□□□ -0.55
NPLOC4-208ENST00000572351 IFIT2P09913 472 aaKnown RBP11.62□□□□□ -0.55
NPLOC4-208ENST00000572351 RASSF7Q02833 373 aa11.62□□□□□ -0.55
NPLOC4-208ENST00000572351 TNNI3KQ59H18 835 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms