RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 WASHC4Q2M389 1173 aa17.51■□□□□ 0.39
RPAIN-211ENST00000572174 INTS3Q68E01 1043 aaKnown RBP17.51■□□□□ 0.39
RPAIN-211ENST00000572174 LMBR1LQ6UX01 489 aa17.51■□□□□ 0.39
RPAIN-211ENST00000572174 FTSJ3Q8IY81 847 aaKnown RBP17.51■□□□□ 0.39
RPAIN-211ENST00000572174 UFL1O94874 794 aa17.5■□□□□ 0.39
RPAIN-211ENST00000572174 GNAI3P08754 354 aa17.5■□□□□ 0.39
RPAIN-211ENST00000572174 TRIM27P14373 513 aa17.5■□□□□ 0.39
RPAIN-211ENST00000572174 VEGFAP15692 232 aaPredicted RBP17.5■□□□□ 0.39
RPAIN-211ENST00000572174 GPSM2P81274 684 aa17.5■□□□□ 0.39
RPAIN-211ENST00000572174 AOC3Q16853 763 aa17.5■□□□□ 0.39
RPAIN-211ENST00000572174 GPC2Q8N158 579 aa17.5■□□□□ 0.39
RPAIN-211ENST00000572174 USP44Q9H0E7 712 aa17.5■□□□□ 0.39
RPAIN-211ENST00000572174 G3V3G9 751 aa17.49■□□□□ 0.39
RPAIN-211ENST00000572174 BCAR3O75815 825 aa17.49■□□□□ 0.39
RPAIN-211ENST00000572174 RABL6Q3YEC7 729 aaPredicted RBP17.49■□□□□ 0.39
RPAIN-211ENST00000572174 DCAF8Q5TAQ9 597 aa17.49■□□□□ 0.39
RPAIN-211ENST00000572174 SUCLG2Q96I99 432 aa17.49■□□□□ 0.39
RPAIN-211ENST00000572174 ZC3H12CQ9C0D7 883 aaKnown RBP17.49■□□□□ 0.39
RPAIN-211ENST00000572174 ZNRF3Q9ULT6 936 aa17.49■□□□□ 0.39
RPAIN-211ENST00000572174 TBC1D16Q8TBP0 767 aa17.48■□□□□ 0.39
RPAIN-211ENST00000572174 L3MBTL3Q96JM7 780 aaPredicted RBP17.48■□□□□ 0.39
RPAIN-211ENST00000572174 BICC1Q9H694 974 aaKnown RBP17.48■□□□□ 0.39
RPAIN-211ENST00000572174 LEMD3Q9Y2U8 911 aa17.48■□□□□ 0.39
RPAIN-211ENST00000572174 MED23Q9ULK4 1368 aa17.48■□□□□ 0.39
RPAIN-211ENST00000572174 KCNJ4P48050 445 aa17.47■□□□□ 0.39
RPAIN-211ENST00000572174 TNIP1Q15025 636 aa17.47■□□□□ 0.39
RPAIN-211ENST00000572174 NMRK2Q9NPI5 230 aa17.47■□□□□ 0.39
RPAIN-211ENST00000572174 POLLQ9UGP5 575 aa17.47■□□□□ 0.39
RPAIN-211ENST00000572174 MINPP1Q9UNW1 487 aa17.47■□□□□ 0.39
RPAIN-211ENST00000572174 COL4A5P29400 1685 aa17.47■□□□□ 0.39
RPAIN-211ENST00000572174 KIF3CO14782 793 aa17.46■□□□□ 0.39
RPAIN-211ENST00000572174 TOMM70O94826 608 aa17.46■□□□□ 0.39
RPAIN-211ENST00000572174 LMOD1P29536 600 aaPredicted RBP17.46■□□□□ 0.39
RPAIN-211ENST00000572174 LDHAL6AQ6ZMR3 332 aa17.46■□□□□ 0.39
RPAIN-211ENST00000572174 CNNM1Q9NRU3 951 aa17.46■□□□□ 0.39
RPAIN-211ENST00000572174 ZNF541Q9H0D2 1346 aa17.46■□□□□ 0.38
RPAIN-211ENST00000572174 EPHA10Q5JZY3 1008 aa17.45■□□□□ 0.38
RPAIN-211ENST00000572174 DZIP1LQ8IYY4 767 aaKnown RBP17.45■□□□□ 0.38
RPAIN-211ENST00000572174 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.45■□□□□ 0.38
RPAIN-211ENST00000572174 RRAGCQ9HB90 399 aa17.45■□□□□ 0.38
RPAIN-211ENST00000572174 MYH13Q9UKX3 1938 aa17.45■□□□□ 0.38
RPAIN-211ENST00000572174 MROH5Q6ZUA9 1318 aa17.45■□□□□ 0.38
RPAIN-211ENST00000572174 SCN9AQ15858 1988 aa17.44■□□□□ 0.38
RPAIN-211ENST00000572174 DDNO94850 711 aaPredicted RBP17.44■□□□□ 0.38
RPAIN-211ENST00000572174 CHRNDQ07001 517 aa17.44■□□□□ 0.38
RPAIN-211ENST00000572174 CIAPIN1Q6FI81 312 aa17.44■□□□□ 0.38
RPAIN-211ENST00000572174 RBM46Q8TBY0 533 aaKnown RBP17.44■□□□□ 0.38
RPAIN-211ENST00000572174 FBXO3Q9UK99 471 aa17.44■□□□□ 0.38
RPAIN-211ENST00000572174 RCAN3Q9UKA8 241 aa17.44■□□□□ 0.38
RPAIN-211ENST00000572174 ANKRD44Q8N8A2 993 aa17.43■□□□□ 0.38
RPAIN-211ENST00000572174 CLUAP1Q96AJ1 413 aa17.43■□□□□ 0.38
RPAIN-211ENST00000572174 KAZALD1Q96I82 304 aa17.43■□□□□ 0.38
RPAIN-211ENST00000572174 CHMP4BQ9H444 224 aaKnown RBP17.43■□□□□ 0.38
RPAIN-211ENST00000572174 HACL1Q9UJ83 578 aa17.43■□□□□ 0.38
RPAIN-211ENST00000572174 GJA3Q9Y6H8 435 aa17.43■□□□□ 0.38
RPAIN-211ENST00000572174 ZNF804BA4D1E1 1349 aa17.43■□□□□ 0.38
RPAIN-211ENST00000572174 RIMBP2O15034 1052 aa17.42■□□□□ 0.38
RPAIN-211ENST00000572174 ECE2O60344 883 aa17.42■□□□□ 0.38
RPAIN-211ENST00000572174 C1QTNF8P60827 252 aa17.42■□□□□ 0.38
RPAIN-211ENST00000572174 FSTL1Q12841 308 aa17.42■□□□□ 0.38
RPAIN-211ENST00000572174 PODNQ7Z5L7 613 aa17.42■□□□□ 0.38
RPAIN-211ENST00000572174 SLC51AQ86UW1 340 aa17.42■□□□□ 0.38
RPAIN-211ENST00000572174 PNMA8AQ86V59 439 aaPredicted RBP17.42■□□□□ 0.38
RPAIN-211ENST00000572174 SMC1BQ8NDV3 1235 aa17.42■□□□□ 0.38
RPAIN-211ENST00000572174 RPS12P25398 132 aaKnown RBP17.41■□□□□ 0.38
RPAIN-211ENST00000572174 MEIS3Q99687 375 aa17.41■□□□□ 0.38
RPAIN-211ENST00000572174 COA1Q9GZY4 146 aa17.41■□□□□ 0.38
RPAIN-211ENST00000572174 DBNDD1Q9H9R9 158 aa17.41■□□□□ 0.38
RPAIN-211ENST00000572174 LRRFIP2Q9Y608 721 aaKnown RBP17.41■□□□□ 0.38
RPAIN-211ENST00000572174 ZNF609O15014 1411 aa17.4■□□□□ 0.38
RPAIN-211ENST00000572174 GNAI2P04899 355 aa17.4■□□□□ 0.38
RPAIN-211ENST00000572174 CXCL9Q07325 125 aa17.4■□□□□ 0.38
RPAIN-211ENST00000572174 ITPRIPQ8IWB1 547 aa17.4■□□□□ 0.38
RPAIN-211ENST00000572174 UBE4AQ14139 1066 aa17.39■□□□□ 0.37
RPAIN-211ENST00000572174 C15orf52Q6ZUT6 534 aaKnown RBP17.39■□□□□ 0.37
RPAIN-211ENST00000572174 ZNF804AQ7Z570 1209 aa17.39■□□□□ 0.37
RPAIN-211ENST00000572174 TMEM57Q8N5G2 664 aa17.39■□□□□ 0.37
RPAIN-211ENST00000572174 ZNF594Q96JF6 807 aaPredicted RBP17.39■□□□□ 0.37
RPAIN-211ENST00000572174 ADAMTSL1Q8N6G6 1762 aa17.38■□□□□ 0.37
RPAIN-211ENST00000572174 EPHX2P34913 555 aa17.38■□□□□ 0.37
RPAIN-211ENST00000572174 MTX1Q13505 466 aa17.38■□□□□ 0.37
RPAIN-211ENST00000572174 LDHDQ86WU2 507 aa17.38■□□□□ 0.37
RPAIN-211ENST00000572174 TAF1DQ9H5J8 278 aaPredicted RBP17.38■□□□□ 0.37
RPAIN-211ENST00000572174 MYO3BQ8WXR4 1341 aa17.38■□□□□ 0.37
RPAIN-211ENST00000572174 ARAP2Q8WZ64 1704 aa17.38■□□□□ 0.37
RPAIN-211ENST00000572174 ZNF646O15015 1829 aaPredicted RBP17.37■□□□□ 0.37
RPAIN-211ENST00000572174 YDJCA8MPS7 323 aa17.37■□□□□ 0.37
RPAIN-211ENST00000572174 RAD17O75943 681 aa17.37■□□□□ 0.37
RPAIN-211ENST00000572174 CIAO1O76071 339 aa17.37■□□□□ 0.37
RPAIN-211ENST00000572174 MMP14P50281 582 aa17.37■□□□□ 0.37
RPAIN-211ENST00000572174 DOK7Q18PE1 504 aa17.37■□□□□ 0.37
RPAIN-211ENST00000572174 METTL24Q5JXM2 366 aa17.37■□□□□ 0.37
RPAIN-211ENST00000572174 DPF2Q92785 391 aa17.37■□□□□ 0.37
RPAIN-211ENST00000572174 GPRC5DQ9NZD1 345 aa17.37■□□□□ 0.37
RPAIN-211ENST00000572174 POTECB2RU33 542 aa17.36■□□□□ 0.37
RPAIN-211ENST00000572174 H7C1D1 291 aa17.36■□□□□ 0.37
RPAIN-211ENST00000572174 EYA2O00167 538 aa17.36■□□□□ 0.37
RPAIN-211ENST00000572174 SCNN1DP51172 638 aa17.36■□□□□ 0.37
RPAIN-211ENST00000572174 USP50Q70EL3 339 aaPredicted RBP17.36■□□□□ 0.37
RPAIN-211ENST00000572174 RIPOR2Q9Y4F9 1068 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms