RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 GGA1Q9UJY5 639 aa17.42■□□□□ 0.38
PRPF8-202ENST00000571346 DOK7Q18PE1 504 aa17.41■□□□□ 0.38
PRPF8-202ENST00000571346 GREM2Q9H772 168 aa17.41■□□□□ 0.38
PRPF8-202ENST00000571346 CNTNAP1P78357 1384 aa17.4■□□□□ 0.38
PRPF8-202ENST00000571346 G3V3G9 751 aa17.4■□□□□ 0.38
PRPF8-202ENST00000571346 PSMD14O00487 310 aa17.4■□□□□ 0.38
PRPF8-202ENST00000571346 GCKRQ14397 625 aa17.4■□□□□ 0.38
PRPF8-202ENST00000571346 DCAF8Q5TAQ9 597 aa17.4■□□□□ 0.38
PRPF8-202ENST00000571346 ZBTB12Q9Y330 459 aaPredicted RBP17.4■□□□□ 0.38
PRPF8-202ENST00000571346 XDHP47989 1333 aa17.4■□□□□ 0.38
PRPF8-202ENST00000571346 MICALL2Q8IY33 904 aa17.39■□□□□ 0.37
PRPF8-202ENST00000571346 LINS1Q8NG48 757 aa17.39■□□□□ 0.37
PRPF8-202ENST00000571346 TTLL11Q8NHH1 800 aa17.39■□□□□ 0.37
PRPF8-202ENST00000571346 ZC3H12CQ9C0D7 883 aaKnown RBP17.39■□□□□ 0.37
PRPF8-202ENST00000571346 PODXL2Q9NZ53 605 aa17.39■□□□□ 0.37
PRPF8-202ENST00000571346 RTL9Q8NET4 1388 aa17.39■□□□□ 0.37
PRPF8-202ENST00000571346 SCN9AQ15858 1988 aa17.39■□□□□ 0.37
PRPF8-202ENST00000571346 SHTN1A0MZ66 631 aa17.38■□□□□ 0.37
PRPF8-202ENST00000571346 F6X3S4 739 aa17.38■□□□□ 0.37
PRPF8-202ENST00000571346 FAM161AQ3B820 660 aa17.38■□□□□ 0.37
PRPF8-202ENST00000571346 TRPM4Q8TD43 1214 aa17.38■□□□□ 0.37
PRPF8-202ENST00000571346 ABT1Q9ULW3 272 aaKnown RBP17.38■□□□□ 0.37
PRPF8-202ENST00000571346 H7C1W4 665 aa17.37■□□□□ 0.37
PRPF8-202ENST00000571346 TRAF5O00463 557 aa17.37■□□□□ 0.37
PRPF8-202ENST00000571346 HSPA1AP0DMV8 641 aaKnown RBP17.37■□□□□ 0.37
PRPF8-202ENST00000571346 HSPA1BP0DMV9 641 aaKnown RBP17.37■□□□□ 0.37
PRPF8-202ENST00000571346 CNOT7Q9UIV1 285 aaKnown RBP17.37■□□□□ 0.37
PRPF8-202ENST00000571346 ZNF521Q96K83 1311 aa17.37■□□□□ 0.37
PRPF8-202ENST00000571346 TRPM7Q96QT4 1865 aa17.37■□□□□ 0.37
PRPF8-202ENST00000571346 IGHMBP2P38935 993 aaKnown RBP17.36■□□□□ 0.37
PRPF8-202ENST00000571346 FMR1Q06787 632 aaKnown RBP eCLIP17.36■□□□□ 0.375e-9■■■■■ 32.5
PRPF8-202ENST00000571346 KCNQ5Q9NR82 932 aa17.36■□□□□ 0.37
PRPF8-202ENST00000571346 H7C1D1 291 aa17.35■□□□□ 0.37
PRPF8-202ENST00000571346 ITGA6P23229 1130 aa17.35■□□□□ 0.37
PRPF8-202ENST00000571346 PAXIP1Q6ZW49 1069 aaPredicted RBP17.35■□□□□ 0.37
PRPF8-202ENST00000571346 CHMP3Q9Y3E7 222 aa17.35■□□□□ 0.37
PRPF8-202ENST00000571346 PSME4Q14997 1843 aa17.35■□□□□ 0.37
PRPF8-202ENST00000571346 ATP2B4P23634 1241 aa17.34■□□□□ 0.37
PRPF8-202ENST00000571346 RPS12P25398 132 aaKnown RBP17.34■□□□□ 0.37
PRPF8-202ENST00000571346 CASP7P55210 303 aa17.34■□□□□ 0.37
PRPF8-202ENST00000571346 SLC4A10Q6U841 1118 aa17.34■□□□□ 0.37
PRPF8-202ENST00000571346 PLA2G12BQ9BX93 195 aa17.34■□□□□ 0.37
PRPF8-202ENST00000571346 GLIS2Q9BZE0 524 aaPredicted RBP17.34■□□□□ 0.37
PRPF8-202ENST00000571346 BSDC1Q9NW68 430 aaPredicted RBP17.34■□□□□ 0.37
PRPF8-202ENST00000571346 MED23Q9ULK4 1368 aa17.33■□□□□ 0.36
PRPF8-202ENST00000571346 VEGFBP49765 207 aa17.33■□□□□ 0.36
PRPF8-202ENST00000571346 HIRAP54198 1017 aaPredicted RBP17.33■□□□□ 0.36
PRPF8-202ENST00000571346 TBC1D10BQ4KMP7 808 aaPredicted RBP17.33■□□□□ 0.36
PRPF8-202ENST00000571346 BEND3Q5T5X7 828 aa17.33■□□□□ 0.36
PRPF8-202ENST00000571346 SAMD7Q7Z3H4 446 aa17.33■□□□□ 0.36
PRPF8-202ENST00000571346 DPF2Q92785 391 aa17.33■□□□□ 0.36
PRPF8-202ENST00000571346 MPHOSPH8Q99549 860 aa17.33■□□□□ 0.36
PRPF8-202ENST00000571346 ZNF408Q9H9D4 720 aa17.33■□□□□ 0.36
PRPF8-202ENST00000571346 MINPP1Q9UNW1 487 aa17.33■□□□□ 0.36
PRPF8-202ENST00000571346 RASSF10A6NK89 507 aa17.32■□□□□ 0.36
PRPF8-202ENST00000571346 E9PSI1 815 aa17.32■□□□□ 0.36
PRPF8-202ENST00000571346 GRM1Q13255 1194 aa17.32■□□□□ 0.36
PRPF8-202ENST00000571346 RBM26Q5T8P6 1007 aaKnown RBP17.32■□□□□ 0.36
PRPF8-202ENST00000571346 FBXW7Q969H0 707 aa17.32■□□□□ 0.36
PRPF8-202ENST00000571346 A0A1B0GUL6 1792 aa17.32■□□□□ 0.36
PRPF8-202ENST00000571346 CELF2O95319 508 aaKnown RBP17.31■□□□□ 0.36
PRPF8-202ENST00000571346 EGFRP00533 1210 aa17.31■□□□□ 0.36
PRPF8-202ENST00000571346 KCNJ4P48050 445 aa17.31■□□□□ 0.36
PRPF8-202ENST00000571346 CCT4P50991 539 aaKnown RBP17.31■□□□□ 0.36
PRPF8-202ENST00000571346 DEFB115Q30KQ5 88 aa17.31■□□□□ 0.36
PRPF8-202ENST00000571346 IFFO2Q5TF58 517 aa17.31■□□□□ 0.36
PRPF8-202ENST00000571346 ZC3H15Q8WU90 426 aaKnown RBP17.31■□□□□ 0.36
PRPF8-202ENST00000571346 ANKRD18BA2A2Z9 1011 aa17.3■□□□□ 0.36
PRPF8-202ENST00000571346 WTIPA6NIX2 430 aaPredicted RBP17.3■□□□□ 0.36
PRPF8-202ENST00000571346 GRM8O00222 908 aa17.3■□□□□ 0.36
PRPF8-202ENST00000571346 KIF4BQ2VIQ3 1234 aa17.3■□□□□ 0.36
PRPF8-202ENST00000571346 C9orf78Q9NZ63 289 aaPredicted RBP17.3■□□□□ 0.36
PRPF8-202ENST00000571346 THSD7BQ9C0I4 1608 aa17.29■□□□□ 0.36
PRPF8-202ENST00000571346 CSF1RP07333 972 aa17.29■□□□□ 0.36
PRPF8-202ENST00000571346 VIL1P09327 827 aaKnown RBP17.29■□□□□ 0.36
PRPF8-202ENST00000571346 IFIT5Q13325 482 aaKnown RBP17.29■□□□□ 0.36
PRPF8-202ENST00000571346 COL13A1Q5TAT6 717 aaPredicted RBP17.29■□□□□ 0.36
PRPF8-202ENST00000571346 RSBN1LQ6PCB5 846 aaPredicted RBP17.29■□□□□ 0.36
PRPF8-202ENST00000571346 AIDAQ96BJ3 306 aa17.29■□□□□ 0.36
PRPF8-202ENST00000571346 SRCIN1Q9C0H9 1055 aa17.29■□□□□ 0.36
PRPF8-202ENST00000571346 ANKRD2Q9GZV1 360 aa17.29■□□□□ 0.36
PRPF8-202ENST00000571346 ZNF609O15014 1411 aa17.29■□□□□ 0.36
PRPF8-202ENST00000571346 ZNF804BA4D1E1 1349 aa17.28■□□□□ 0.36
PRPF8-202ENST00000571346 KLRK1P26718 216 aa17.28■□□□□ 0.36
PRPF8-202ENST00000571346 TAF7LQ5H9L4 462 aa17.28■□□□□ 0.36
PRPF8-202ENST00000571346 CST9Q5W186 159 aa17.28■□□□□ 0.36
PRPF8-202ENST00000571346 CDC37L1Q7L3B6 337 aa17.28■□□□□ 0.36
PRPF8-202ENST00000571346 PODNQ7Z5L7 613 aa17.28■□□□□ 0.36
PRPF8-202ENST00000571346 GGA3Q9NZ52 723 aa17.28■□□□□ 0.36
PRPF8-202ENST00000571346 ZNF646O15015 1829 aaPredicted RBP17.28■□□□□ 0.36
PRPF8-202ENST00000571346 WDR33Q9C0J8 1336 aaKnown RBP17.27■□□□□ 0.36
PRPF8-202ENST00000571346 USP17L3A6NCW0 530 aa17.27■□□□□ 0.36
PRPF8-202ENST00000571346 USP17L4A6NCW7 530 aa17.27■□□□□ 0.36
PRPF8-202ENST00000571346 ALDH1L1O75891 902 aa17.27■□□□□ 0.36
PRPF8-202ENST00000571346 FOXO4P98177 505 aa17.27■□□□□ 0.36
PRPF8-202ENST00000571346 CHRNDQ07001 517 aa17.27■□□□□ 0.36
PRPF8-202ENST00000571346 CYP4F22Q6NT55 531 aa17.27■□□□□ 0.36
PRPF8-202ENST00000571346 LMBR1LQ6UX01 489 aa17.27■□□□□ 0.36
PRPF8-202ENST00000571346 USP17L1Q7RTZ2 530 aa17.27■□□□□ 0.36
PRPF8-202ENST00000571346 KRT26Q7Z3Y9 468 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms