RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 KLRG1Q96E93 195 aa6.89□□□□□ -1.31
CHD3-212ENST00000570758 KCNQ5Q9NR82 932 aa6.89□□□□□ -1.31
CHD3-212ENST00000570758 PODXL2Q9NZ53 605 aa6.89□□□□□ -1.31
CHD3-212ENST00000570758 GPRC5DQ9NZD1 345 aa6.89□□□□□ -1.31
CHD3-212ENST00000570758 GGA1Q9UJY5 639 aa6.89□□□□□ -1.31
CHD3-212ENST00000570758 CLEC11AQ9Y240 323 aa6.89□□□□□ -1.31
CHD3-212ENST00000570758 PASKQ96RG2 1323 aa6.89□□□□□ -1.31
CHD3-212ENST00000570758 XDHP47989 1333 aa6.88□□□□□ -1.31
CHD3-212ENST00000570758 PSMD14O00487 310 aa6.88□□□□□ -1.31
CHD3-212ENST00000570758 ECE2O60344 883 aa6.88□□□□□ -1.31
CHD3-212ENST00000570758 ITGA6P23229 1130 aa6.88□□□□□ -1.31
CHD3-212ENST00000570758 ATP2B4P23634 1241 aa6.88□□□□□ -1.31
CHD3-212ENST00000570758 FOXO4P98177 505 aa6.88□□□□□ -1.31
CHD3-212ENST00000570758 FMR1Q06787 632 aaKnown RBP eCLIP6.88□□□□□ -1.31
CHD3-212ENST00000570758 TNIP1Q15025 636 aa6.88□□□□□ -1.31
CHD3-212ENST00000570758 EPHA10Q5JZY3 1008 aa6.88□□□□□ -1.31
CHD3-212ENST00000570758 SLC4A10Q6U841 1118 aa6.88□□□□□ -1.31
CHD3-212ENST00000570758 PNMA8AQ86V59 439 aaPredicted RBP6.88□□□□□ -1.31
CHD3-212ENST00000570758 MIER1Q8N108 512 aa6.88□□□□□ -1.31
CHD3-212ENST00000570758 CNTROBQ8N137 903 aa6.88□□□□□ -1.31
CHD3-212ENST00000570758 TRPM4Q8TD43 1214 aa6.88□□□□□ -1.31
CHD3-212ENST00000570758 SSH1Q8WYL5 1049 aa6.88□□□□□ -1.31
CHD3-212ENST00000570758 CDC5LQ99459 802 aaKnown RBP6.88□□□□□ -1.31
CHD3-212ENST00000570758 EYA3Q99504 573 aa6.88□□□□□ -1.31
CHD3-212ENST00000570758 BCL2L13Q9BXK5 485 aa6.88□□□□□ -1.31
CHD3-212ENST00000570758 BSDC1Q9NW68 430 aaPredicted RBP6.88□□□□□ -1.31
CHD3-212ENST00000570758 ANKIB1Q9P2G1 1089 aa6.88□□□□□ -1.31
CHD3-212ENST00000570758 MINPP1Q9UNW1 487 aa6.88□□□□□ -1.31
CHD3-212ENST00000570758 ZBTB12Q9Y330 459 aaPredicted RBP6.88□□□□□ -1.31
CHD3-212ENST00000570758 MYH3P11055 1940 aa6.88□□□□□ -1.31
CHD3-212ENST00000570758 SPEF2Q9C093 1822 aa6.87□□□□□ -1.31
CHD3-212ENST00000570758 GRM8O00222 908 aa6.87□□□□□ -1.31
CHD3-212ENST00000570758 HIRAP54198 1017 aaPredicted RBP6.87□□□□□ -1.31
CHD3-212ENST00000570758 USP50Q70EL3 339 aaPredicted RBP6.87□□□□□ -1.31
CHD3-212ENST00000570758 JMYQ8N9B5 988 aa6.87□□□□□ -1.31
CHD3-212ENST00000570758 ZC3H12CQ9C0D7 883 aaKnown RBP6.87□□□□□ -1.31
CHD3-212ENST00000570758 ADARB2Q9NS39 739 aaKnown RBP6.87□□□□□ -1.31
CHD3-212ENST00000570758 SCN9AQ15858 1988 aa6.86□□□□□ -1.31
CHD3-212ENST00000570758 ANKRD18BA2A2Z9 1011 aa6.86□□□□□ -1.31
CHD3-212ENST00000570758 TRAF5O00463 557 aa6.86□□□□□ -1.31
CHD3-212ENST00000570758 ALDH1L1O75891 902 aa6.86□□□□□ -1.31
CHD3-212ENST00000570758 EGFRP00533 1210 aa6.86□□□□□ -1.31
CHD3-212ENST00000570758 VIL1P09327 827 aaKnown RBP6.86□□□□□ -1.31
CHD3-212ENST00000570758 KLRK1P26718 216 aa6.86□□□□□ -1.31
CHD3-212ENST00000570758 IGHMBP2P38935 993 aaKnown RBP6.86□□□□□ -1.31
CHD3-212ENST00000570758 CCT4P50991 539 aaKnown RBP6.86□□□□□ -1.31
CHD3-212ENST00000570758 DIEXFQ68CQ4 756 aaKnown RBP6.86□□□□□ -1.31
CHD3-212ENST00000570758 LMBR1LQ6UX01 489 aa6.86□□□□□ -1.31
CHD3-212ENST00000570758 MICALL2Q8IY33 904 aa6.86□□□□□ -1.31
CHD3-212ENST00000570758 KAZALD1Q96I82 304 aa6.86□□□□□ -1.31
CHD3-212ENST00000570758 SUCLG2Q96I99 432 aa6.86□□□□□ -1.31
CHD3-212ENST00000570758 SRCIN1Q9C0H9 1055 aa6.86□□□□□ -1.31
CHD3-212ENST00000570758 CREBZFQ9NS37 354 aa6.86□□□□□ -1.31
CHD3-212ENST00000570758 MKRN1Q9UHC7 482 aaKnown RBP6.86□□□□□ -1.31
CHD3-212ENST00000570758 CNOT7Q9UIV1 285 aaKnown RBP6.86□□□□□ -1.31
CHD3-212ENST00000570758 CHMP3Q9Y3E7 222 aa6.86□□□□□ -1.31
CHD3-212ENST00000570758 MED23Q9ULK4 1368 aa6.85□□□□□ -1.31
CHD3-212ENST00000570758 PTPRCP08575 1304 aa6.85□□□□□ -1.31
CHD3-212ENST00000570758 TMEM88BA6NKF7 163 aa6.85□□□□□ -1.31
CHD3-212ENST00000570758 G3V3G9 751 aa6.85□□□□□ -1.31
CHD3-212ENST00000570758 H7C1D1 291 aa6.85□□□□□ -1.31
CHD3-212ENST00000570758 SNAP23O00161 211 aa6.85□□□□□ -1.31
CHD3-212ENST00000570758 NBPF7P0C2Y1 421 aaPredicted RBP6.85□□□□□ -1.31
CHD3-212ENST00000570758 IFIT5Q13325 482 aaKnown RBP6.85□□□□□ -1.31
CHD3-212ENST00000570758 ALDH1L2Q3SY69 923 aa6.85□□□□□ -1.31
CHD3-212ENST00000570758 TBC1D10BQ4KMP7 808 aaPredicted RBP6.85□□□□□ -1.31
CHD3-212ENST00000570758 DCAF8Q5TAQ9 597 aa6.85□□□□□ -1.31
CHD3-212ENST00000570758 SAMD7Q7Z3H4 446 aa6.85□□□□□ -1.31
CHD3-212ENST00000570758 TXNRD3Q86VQ6 643 aa6.85□□□□□ -1.31
CHD3-212ENST00000570758 HELBQ8NG08 1087 aaPredicted RBP6.85□□□□□ -1.31
CHD3-212ENST00000570758 DPF2Q92785 391 aa6.85□□□□□ -1.31
CHD3-212ENST00000570758 ZNF594Q96JF6 807 aaPredicted RBP6.85□□□□□ -1.31
CHD3-212ENST00000570758 GLIS2Q9BZE0 524 aaPredicted RBP6.85□□□□□ -1.31
CHD3-212ENST00000570758 SMC4Q9NTJ3 1288 aa6.85□□□□□ -1.31
CHD3-212ENST00000570758 C9orf78Q9NZ63 289 aaPredicted RBP6.85□□□□□ -1.31
CHD3-212ENST00000570758 PGAP2Q9UHJ9 254 aa6.85□□□□□ -1.31
CHD3-212ENST00000570758 LEMD3Q9Y2U8 911 aa6.85□□□□□ -1.31
CHD3-212ENST00000570758 CNTNAP1P78357 1384 aa6.84□□□□□ -1.31
CHD3-212ENST00000570758 ZNF804BA4D1E1 1349 aa6.84□□□□□ -1.31
CHD3-212ENST00000570758 UTYO14607 1347 aa6.84□□□□□ -1.31
CHD3-212ENST00000570758 ASTN2O75129 1339 aaPredicted RBP6.84□□□□□ -1.31
CHD3-212ENST00000570758 IRS2Q9Y4H2 1338 aa6.84□□□□□ -1.31
CHD3-212ENST00000570758 USP17L3A6NCW0 530 aa6.84□□□□□ -1.31
CHD3-212ENST00000570758 USP17L4A6NCW7 530 aa6.84□□□□□ -1.31
CHD3-212ENST00000570758 TAF5LO75529 589 aa6.84□□□□□ -1.31
CHD3-212ENST00000570758 RPS12P25398 132 aaKnown RBP6.84□□□□□ -1.31
CHD3-212ENST00000570758 CHRNDQ07001 517 aa6.84□□□□□ -1.31
CHD3-212ENST00000570758 RBM26Q5T8P6 1007 aaKnown RBP6.84□□□□□ -1.31
CHD3-212ENST00000570758 CST9Q5W186 159 aa6.84□□□□□ -1.31
CHD3-212ENST00000570758 RSBN1LQ6PCB5 846 aaPredicted RBP6.84□□□□□ -1.31
CHD3-212ENST00000570758 DLK2Q6UY11 383 aa6.84□□□□□ -1.31
CHD3-212ENST00000570758 USP17L1Q7RTZ2 530 aa6.84□□□□□ -1.31
CHD3-212ENST00000570758 ANKRD44Q8N8A2 993 aa6.84□□□□□ -1.31
CHD3-212ENST00000570758 GMLQ99445 158 aa6.84□□□□□ -1.31
CHD3-212ENST00000570758 MPHOSPH8Q99549 860 aa6.84□□□□□ -1.31
CHD3-212ENST00000570758 MXD3Q9BW11 206 aa6.84□□□□□ -1.31
CHD3-212ENST00000570758 ANKRD2Q9GZV1 360 aa6.84□□□□□ -1.31
CHD3-212ENST00000570758 NOB1Q9ULX3 412 aaKnown RBP6.84□□□□□ -1.31
CHD3-212ENST00000570758 VEGFBP49765 207 aa6.83□□□□□ -1.32
CHD3-212ENST00000570758 RARSP54136 660 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms