RNA–Protein interactions for RNA: ENST00000570692.1

TVP23A-203, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 4

Gene TVP23A, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-203ENST00000570692 COL4A1P02462 1669 aa20.16■□□□□ 0.82
TVP23A-203ENST00000570692 DLG5Q8TDM6 1919 aa20.16■□□□□ 0.82
TVP23A-203ENST00000570692 NEFMP07197 916 aa20.16■□□□□ 0.82
TVP23A-203ENST00000570692 VIL1P09327 827 aaKnown RBP20.16■□□□□ 0.82
TVP23A-203ENST00000570692 SCARF1Q14162 830 aa20.16■□□□□ 0.82
TVP23A-203ENST00000570692 TSPYL4Q9UJ04 414 aa20.16■□□□□ 0.82
TVP23A-203ENST00000570692 TBC1D16Q8TBP0 767 aa20.15■□□□□ 0.82
TVP23A-203ENST00000570692 GCC1Q96CN9 775 aa20.15■□□□□ 0.82
TVP23A-203ENST00000570692 PLEKHF1Q96S99 279 aa20.15■□□□□ 0.82
TVP23A-203ENST00000570692 SCAF8Q9UPN6 1271 aaKnown RBP20.15■□□□□ 0.82
TVP23A-203ENST00000570692 UBE2Q2LH0YL09 131 aa20.14■□□□□ 0.81
TVP23A-203ENST00000570692 FKBP1BP68106 108 aa20.14■□□□□ 0.81
TVP23A-203ENST00000570692 HABP4Q5JVS0 413 aaKnown RBP20.14■□□□□ 0.81
TVP23A-203ENST00000570692 EYA3Q99504 573 aa20.14■□□□□ 0.81
TVP23A-203ENST00000570692 GPR25O00155 361 aa20.13■□□□□ 0.81
TVP23A-203ENST00000570692 FBXO46Q6PJ61 603 aaPredicted RBP20.13■□□□□ 0.81
TVP23A-203ENST00000570692 CCER1Q8TC90 406 aaPredicted RBP20.13■□□□□ 0.81
TVP23A-203ENST00000570692 FAM89AQ96GI7 184 aa20.13■□□□□ 0.81
TVP23A-203ENST00000570692 MKI67P46013 3256 aaKnown RBP20.12■□□□□ 0.81
TVP23A-203ENST00000570692 ZNF280AP59817 542 aaPredicted RBP20.12■□□□□ 0.81
TVP23A-203ENST00000570692 SF3B3Q15393 1217 aaKnown RBP20.12■□□□□ 0.81
TVP23A-203ENST00000570692 ZC3H12CQ9C0D7 883 aaKnown RBP20.12■□□□□ 0.81
TVP23A-203ENST00000570692 PAPPA2Q9BXP8 1791 aa20.11■□□□□ 0.81
TVP23A-203ENST00000570692 PRAMEF18Q5VWM3 479 aa20.11■□□□□ 0.81
TVP23A-203ENST00000570692 SCN9AQ15858 1988 aa20.1■□□□□ 0.81
TVP23A-203ENST00000570692 TM4SF4P48230 202 aa20.1■□□□□ 0.81
TVP23A-203ENST00000570692 MKRN3Q13064 507 aaKnown RBP20.1■□□□□ 0.81
TVP23A-203ENST00000570692 RTL5Q5HYW3 569 aaPredicted RBP20.1■□□□□ 0.81
TVP23A-203ENST00000570692 RSBN1LQ6PCB5 846 aaPredicted RBP20.1■□□□□ 0.81
TVP23A-203ENST00000570692 R3HDMLQ9H3Y0 253 aa20.1■□□□□ 0.81
TVP23A-203ENST00000570692 HTTP42858 3142 aa20.1■□□□□ 0.81
TVP23A-203ENST00000570692 DDX60Q8IY21 1712 aaKnown RBP20.1■□□□□ 0.81
TVP23A-203ENST00000570692 G3V3G9 751 aa20.09■□□□□ 0.81
TVP23A-203ENST00000570692 DCAF8Q5TAQ9 597 aa20.09■□□□□ 0.81
TVP23A-203ENST00000570692 MYOZ2Q9NPC6 264 aa20.09■□□□□ 0.81
TVP23A-203ENST00000570692 ATP5J2-PTCD1G3V325 749 aa20.08■□□□□ 0.81
TVP23A-203ENST00000570692 RPS8P62241 208 aaKnown RBP20.08■□□□□ 0.81
TVP23A-203ENST00000570692 NOM1Q5C9Z4 860 aaKnown RBP20.08■□□□□ 0.81
TVP23A-203ENST00000570692 AGBL3Q8NEM8 1001 aa20.08■□□□□ 0.81
TVP23A-203ENST00000570692 FKTNO75072 461 aa20.07■□□□□ 0.8
TVP23A-203ENST00000570692 UFL1O94874 794 aa20.07■□□□□ 0.8
TVP23A-203ENST00000570692 TTLL12Q14166 644 aaPredicted RBP20.07■□□□□ 0.8
TVP23A-203ENST00000570692 GMLQ99445 158 aa20.07■□□□□ 0.8
TVP23A-203ENST00000570692 PITPNM2Q9BZ72 1349 aa20.06■□□□□ 0.8
TVP23A-203ENST00000570692 USP17L8P0C7I0 530 aa20.06■□□□□ 0.8
TVP23A-203ENST00000570692 ISCA1Q9BUE6 129 aa20.06■□□□□ 0.8
TVP23A-203ENST00000570692 PODXL2Q9NZ53 605 aa20.06■□□□□ 0.8
TVP23A-203ENST00000570692 MAPK8IP3Q9UPT6 1336 aa20.05■□□□□ 0.8
TVP23A-203ENST00000570692 ZNF609O15014 1411 aa20.05■□□□□ 0.8
TVP23A-203ENST00000570692 POTEFA5A3E0 1075 aa20.05■□□□□ 0.8
TVP23A-203ENST00000570692 KRT24Q2M2I5 525 aa20.05■□□□□ 0.8
TVP23A-203ENST00000570692 SEC31BQ9NQW1 1179 aa20.05■□□□□ 0.8
TVP23A-203ENST00000570692 ANKIB1Q9P2G1 1089 aa20.05■□□□□ 0.8
TVP23A-203ENST00000570692 IRS4O14654 1257 aaPredicted RBP20.04■□□□□ 0.8
TVP23A-203ENST00000570692 NBPF9Q3BBW0 867 aa20.04■□□□□ 0.8
TVP23A-203ENST00000570692 PLBD2Q8NHP8 589 aa20.04■□□□□ 0.8
TVP23A-203ENST00000570692 CHPF2Q9P2E5 772 aa20.04■□□□□ 0.8
TVP23A-203ENST00000570692 GGA1Q9UJY5 639 aa20.04■□□□□ 0.8
TVP23A-203ENST00000570692 CENPFP49454 3210 aa20.03■□□□□ 0.8
TVP23A-203ENST00000570692 RIPK4P57078 832 aa20.02■□□□□ 0.8
TVP23A-203ENST00000570692 SREBF2Q12772 1141 aa20.02■□□□□ 0.8
TVP23A-203ENST00000570692 ANKRD13DQ6ZTN6 518 aa20.02■□□□□ 0.8
TVP23A-203ENST00000570692 CFHR5Q9BXR6 569 aa20.02■□□□□ 0.8
TVP23A-203ENST00000570692 BABAM1Q9NWV8 329 aa20.02■□□□□ 0.8
TVP23A-203ENST00000570692 FXR1P51114 621 aaKnown RBP eCLIP20.01■□□□□ 0.79
TVP23A-203ENST00000570692 PTPN12Q05209 780 aaKnown RBP20.01■□□□□ 0.79
TVP23A-203ENST00000570692 PRKG1Q13976 671 aa20.01■□□□□ 0.79
TVP23A-203ENST00000570692 USP17L3A6NCW0 530 aa20■□□□□ 0.79
TVP23A-203ENST00000570692 USP17L4A6NCW7 530 aa20■□□□□ 0.79
TVP23A-203ENST00000570692 USP17L1Q7RTZ2 530 aa20■□□□□ 0.79
TVP23A-203ENST00000570692 MXD3Q9BW11 206 aa20■□□□□ 0.79
TVP23A-203ENST00000570692 TRIM17Q9Y577 477 aa20■□□□□ 0.79
TVP23A-203ENST00000570692 WTIPA6NIX2 430 aaPredicted RBP19.99■□□□□ 0.79
TVP23A-203ENST00000570692 OTOP1Q7RTM1 612 aa19.99■□□□□ 0.79
TVP23A-203ENST00000570692 PNNQ9H307 717 aaKnown RBP19.99■□□□□ 0.79
TVP23A-203ENST00000570692 BRCA2P51587 3418 aa19.99■□□□□ 0.79
TVP23A-203ENST00000570692 NF2P35240 595 aa19.98■□□□□ 0.79
TVP23A-203ENST00000570692 INTS3Q68E01 1043 aaKnown RBP19.98■□□□□ 0.79
TVP23A-203ENST00000570692 WNT10BO00744 389 aa19.97■□□□□ 0.79
TVP23A-203ENST00000570692 HDGFL1Q5TGJ6 251 aa19.97■□□□□ 0.79
TVP23A-203ENST00000570692 SPRYD7Q5W111 196 aa19.97■□□□□ 0.79
TVP23A-203ENST00000570692 PODNQ7Z5L7 613 aa19.97■□□□□ 0.79
TVP23A-203ENST00000570692 CCDC85AQ96PX6 553 aaPredicted RBP19.97■□□□□ 0.79
TVP23A-203ENST00000570692 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.97■□□□□ 0.79
TVP23A-203ENST00000570692 SASH1O94885 1247 aa19.96■□□□□ 0.79
TVP23A-203ENST00000570692 EN2P19622 333 aaPredicted RBP19.96■□□□□ 0.79
TVP23A-203ENST00000570692 TRIM28Q13263 835 aaKnown RBP19.96■□□□□ 0.79
TVP23A-203ENST00000570692 FZD1Q9UP38 647 aa19.96■□□□□ 0.79
TVP23A-203ENST00000570692 XDHP47989 1333 aa19.96■□□□□ 0.79
TVP23A-203ENST00000570692 DACT2Q5SW24 774 aa19.95■□□□□ 0.78
TVP23A-203ENST00000570692 LDLRAD1Q5T700 205 aa19.95■□□□□ 0.78
TVP23A-203ENST00000570692 ARMC9Q7Z3E5 817 aa19.95■□□□□ 0.78
TVP23A-203ENST00000570692 ZBTB38Q8NAP3 1195 aaPredicted RBP19.95■□□□□ 0.78
TVP23A-203ENST00000570692 PSME4Q14997 1843 aa19.95■□□□□ 0.78
TVP23A-203ENST00000570692 CHL1O00533 1208 aa19.94■□□□□ 0.78
TVP23A-203ENST00000570692 ALDH1A1P00352 501 aa19.94■□□□□ 0.78
TVP23A-203ENST00000570692 IFNL1Q8IU54 200 aa19.94■□□□□ 0.78
TVP23A-203ENST00000570692 JARID2Q92833 1246 aaPredicted RBP19.94■□□□□ 0.78
TVP23A-203ENST00000570692 FBXW7Q969H0 707 aa19.94■□□□□ 0.78
TVP23A-203ENST00000570692 DBF4Q9UBU7 674 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms