RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 NOB1Q9ULX3 412 aaKnown RBP14.08□□□□□ -0.16
SMG6-206ENST00000570668 MINPP1Q9UNW1 487 aa14.08□□□□□ -0.16
SMG6-206ENST00000570668 XDHP47989 1333 aa14.08□□□□□ -0.16
SMG6-206ENST00000570668 ANKRD18BA2A2Z9 1011 aa14.07□□□□□ -0.16
SMG6-206ENST00000570668 NBPF7P0C2Y1 421 aaPredicted RBP14.07□□□□□ -0.16
SMG6-206ENST00000570668 IGHMBP2P38935 993 aaKnown RBP14.07□□□□□ -0.16
SMG6-206ENST00000570668 CXCL9Q07325 125 aa14.07□□□□□ -0.16
SMG6-206ENST00000570668 LMBR1LQ6UX01 489 aa14.07□□□□□ -0.16
SMG6-206ENST00000570668 SMC1BQ8NDV3 1235 aa14.07□□□□□ -0.16
SMG6-206ENST00000570668 KAZALD1Q96I82 304 aa14.07□□□□□ -0.16
SMG6-206ENST00000570668 TAF1DQ9H5J8 278 aaPredicted RBP14.07□□□□□ -0.16
SMG6-206ENST00000570668 GJA3Q9Y6H8 435 aa14.07□□□□□ -0.16
SMG6-206ENST00000570668 RIMBP2O15034 1052 aa14.06□□□□□ -0.16
SMG6-206ENST00000570668 UFL1O94874 794 aa14.06□□□□□ -0.16
SMG6-206ENST00000570668 HSPA6P17066 643 aa14.06□□□□□ -0.16
SMG6-206ENST00000570668 ATP2B4P23634 1241 aa14.06□□□□□ -0.16
SMG6-206ENST00000570668 IFIT5Q13325 482 aaKnown RBP14.06□□□□□ -0.16
SMG6-206ENST00000570668 ARHGAP45Q92619 1136 aa14.06□□□□□ -0.16
SMG6-206ENST00000570668 SUCLG2Q96I99 432 aa14.06□□□□□ -0.16
SMG6-206ENST00000570668 MPHOSPH8Q99549 860 aa14.06□□□□□ -0.16
SMG6-206ENST00000570668 API5Q9BZZ5 524 aaKnown RBP14.06□□□□□ -0.16
SMG6-206ENST00000570668 ZC3H12CQ9C0D7 883 aaKnown RBP14.06□□□□□ -0.16
SMG6-206ENST00000570668 USP44Q9H0E7 712 aa14.06□□□□□ -0.16
SMG6-206ENST00000570668 HACL1Q9UJ83 578 aa14.06□□□□□ -0.16
SMG6-206ENST00000570668 KIF16BQ96L93 1317 aa14.06□□□□□ -0.16
SMG6-206ENST00000570668 YDJCA8MPS7 323 aa14.05□□□□□ -0.16
SMG6-206ENST00000570668 CCT4P50991 539 aaKnown RBP14.05□□□□□ -0.16
SMG6-206ENST00000570668 SCNN1DP51172 638 aa14.05□□□□□ -0.16
SMG6-206ENST00000570668 CIAPIN1Q6FI81 312 aa14.05□□□□□ -0.16
SMG6-206ENST00000570668 GPR101Q96P66 508 aaPredicted RBP14.05□□□□□ -0.16
SMG6-206ENST00000570668 SPEF2Q9C093 1822 aa14.04□□□□□ -0.16
SMG6-206ENST00000570668 EPHX2P34913 555 aa14.04□□□□□ -0.16
SMG6-206ENST00000570668 TNIP1Q15025 636 aa14.04□□□□□ -0.16
SMG6-206ENST00000570668 CCDC57Q2TAC2 916 aa14.04□□□□□ -0.16
SMG6-206ENST00000570668 RABL6Q3YEC7 729 aaPredicted RBP14.04□□□□□ -0.16
SMG6-206ENST00000570668 ANKRD2Q9GZV1 360 aa14.04□□□□□ -0.16
SMG6-206ENST00000570668 DBNDD1Q9H9R9 158 aa14.04□□□□□ -0.16
SMG6-206ENST00000570668 CHMP3Q9Y3E7 222 aa14.04□□□□□ -0.16
SMG6-206ENST00000570668 ECE2O60344 883 aa14.03□□□□□ -0.16
SMG6-206ENST00000570668 RAD17O75943 681 aa14.03□□□□□ -0.16
SMG6-206ENST00000570668 POTEIP0CG38 1075 aa14.03□□□□□ -0.16
SMG6-206ENST00000570668 POTEJP0CG39 1038 aa14.03□□□□□ -0.16
SMG6-206ENST00000570668 LMOD1P29536 600 aaPredicted RBP14.03□□□□□ -0.16
SMG6-206ENST00000570668 DOK7Q18PE1 504 aa14.03□□□□□ -0.16
SMG6-206ENST00000570668 PNMA8AQ86V59 439 aaPredicted RBP14.03□□□□□ -0.16
SMG6-206ENST00000570668 BICC1Q9H694 974 aaKnown RBP14.03□□□□□ -0.16
SMG6-206ENST00000570668 LEMD3Q9Y2U8 911 aa14.03□□□□□ -0.16
SMG6-206ENST00000570668 MED23Q9ULK4 1368 aa14.02□□□□□ -0.17
SMG6-206ENST00000570668 WTIPA6NIX2 430 aaPredicted RBP14.02□□□□□ -0.17
SMG6-206ENST00000570668 IPO8O15397 1037 aaKnown RBP14.02□□□□□ -0.17
SMG6-206ENST00000570668 BCAR3O75815 825 aa14.02□□□□□ -0.17
SMG6-206ENST00000570668 CHRNDQ07001 517 aa14.02□□□□□ -0.17
SMG6-206ENST00000570668 CHADLQ6NUI6 762 aa14.02□□□□□ -0.17
SMG6-206ENST00000570668 LDHDQ86WU2 507 aa14.02□□□□□ -0.17
SMG6-206ENST00000570668 GPRC5DQ9NZD1 345 aa14.02□□□□□ -0.17
SMG6-206ENST00000570668 EPS15P42566 896 aa14.01□□□□□ -0.17
SMG6-206ENST00000570668 GMPSP49915 693 aaPredicted RBP14.01□□□□□ -0.17
SMG6-206ENST00000570668 INTS3Q68E01 1043 aaKnown RBP14.01□□□□□ -0.17
SMG6-206ENST00000570668 LDHAL6AQ6ZMR3 332 aa14.01□□□□□ -0.17
SMG6-206ENST00000570668 ANKRD44Q8N8A2 993 aa14.01□□□□□ -0.17
SMG6-206ENST00000570668 ZNF594Q96JF6 807 aaPredicted RBP14.01□□□□□ -0.17
SMG6-206ENST00000570668 SCN9AQ15858 1988 aa14□□□□□ -0.17
SMG6-206ENST00000570668 ZNF804BA4D1E1 1349 aa14□□□□□ -0.17
SMG6-206ENST00000570668 G3V3G9 751 aa14□□□□□ -0.17
SMG6-206ENST00000570668 PSMD14O00487 310 aa14□□□□□ -0.17
SMG6-206ENST00000570668 TRIM27P14373 513 aa14□□□□□ -0.17
SMG6-206ENST00000570668 APLP1P51693 650 aa14□□□□□ -0.17
SMG6-206ENST00000570668 EAPPQ56P03 285 aaPredicted RBP14□□□□□ -0.17
SMG6-206ENST00000570668 TAF7LQ5H9L4 462 aa14□□□□□ -0.17
SMG6-206ENST00000570668 DCAF8Q5TAQ9 597 aa14□□□□□ -0.17
SMG6-206ENST00000570668 ATF7IPQ6VMQ6 1270 aa14□□□□□ -0.17
SMG6-206ENST00000570668 PODNQ7Z5L7 613 aa14□□□□□ -0.17
SMG6-206ENST00000570668 DPF2Q92785 391 aa14□□□□□ -0.17
SMG6-206ENST00000570668 KCNQ5Q9NR82 932 aa14□□□□□ -0.17
SMG6-206ENST00000570668 ADAMTSL1Q8N6G6 1762 aa14□□□□□ -0.17
SMG6-206ENST00000570668 UBTFL1P0CB47 393 aaPredicted RBP13.99□□□□□ -0.17
SMG6-206ENST00000570668 RPS12P25398 132 aaKnown RBP13.99□□□□□ -0.17
SMG6-206ENST00000570668 USP50Q70EL3 339 aaPredicted RBP13.99□□□□□ -0.17
SMG6-206ENST00000570668 CNNM1Q9NRU3 951 aa13.99□□□□□ -0.17
SMG6-206ENST00000570668 ADARB2Q9NS39 739 aaKnown RBP13.99□□□□□ -0.17
SMG6-206ENST00000570668 TAF5LO75529 589 aa13.98□□□□□ -0.17
SMG6-206ENST00000570668 VIL1P09327 827 aaKnown RBP13.98□□□□□ -0.17
SMG6-206ENST00000570668 KCNJ4P48050 445 aa13.98□□□□□ -0.17
SMG6-206ENST00000570668 C15orf52Q6ZUT6 534 aaKnown RBP13.98□□□□□ -0.17
SMG6-206ENST00000570668 TXNRD3Q86VQ6 643 aa13.98□□□□□ -0.17
SMG6-206ENST00000570668 HELBQ8NG08 1087 aaPredicted RBP13.98□□□□□ -0.17
SMG6-206ENST00000570668 FRAT1Q92837 279 aaPredicted RBP13.98□□□□□ -0.17
SMG6-206ENST00000570668 COA1Q9GZY4 146 aa13.98□□□□□ -0.17
SMG6-206ENST00000570668 HDAC5Q9UQL6 1122 aa13.98□□□□□ -0.17
SMG6-206ENST00000570668 ZBTB12Q9Y330 459 aaPredicted RBP13.98□□□□□ -0.17
SMG6-206ENST00000570668 RIPOR2Q9Y4F9 1068 aa13.98□□□□□ -0.17
SMG6-206ENST00000570668 IRS2Q9Y4H2 1338 aa13.97□□□□□ -0.17
SMG6-206ENST00000570668 A0A1B0GUL6 1792 aa13.97□□□□□ -0.17
SMG6-206ENST00000570668 SNAP23O00161 211 aa13.97□□□□□ -0.17
SMG6-206ENST00000570668 KLRK1P26718 216 aa13.97□□□□□ -0.17
SMG6-206ENST00000570668 ZKSCAN2Q63HK3 967 aa13.97□□□□□ -0.17
SMG6-206ENST00000570668 MEIS3Q99687 375 aa13.97□□□□□ -0.17
SMG6-206ENST00000570668 PUS3Q9BZE2 481 aaKnown RBP13.97□□□□□ -0.17
SMG6-206ENST00000570668 CNOT7Q9UIV1 285 aaKnown RBP13.97□□□□□ -0.17
SMG6-206ENST00000570668 CLEC11AQ9Y240 323 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms