RNA–Protein interactions for RNA: ENST00000570557.5

CHRNB1-203, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 5

Gene CHRNB1, Length 947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-203ENST00000570557 KIF16BQ96L93 1317 aa16.38■□□□□ 0.21
CHRNB1-203ENST00000570557 A0A1B0GUL6 1792 aa16.37■□□□□ 0.21
CHRNB1-203ENST00000570557 YDJCA8MPS7 323 aa16.37■□□□□ 0.21
CHRNB1-203ENST00000570557 BCAR3O75815 825 aa16.37■□□□□ 0.21
CHRNB1-203ENST00000570557 CCT4P50991 539 aaKnown RBP16.37■□□□□ 0.21
CHRNB1-203ENST00000570557 CXCL9Q07325 125 aa16.37■□□□□ 0.21
CHRNB1-203ENST00000570557 WASHC4Q2M389 1173 aa16.37■□□□□ 0.21
CHRNB1-203ENST00000570557 GGA1Q9UJY5 639 aa16.37■□□□□ 0.21
CHRNB1-203ENST00000570557 ANKRD18BA2A2Z9 1011 aa16.36■□□□□ 0.21
CHRNB1-203ENST00000570557 WTIPA6NIX2 430 aaPredicted RBP16.36■□□□□ 0.21
CHRNB1-203ENST00000570557 C6orf229H3BNL8 230 aa16.36■□□□□ 0.21
CHRNB1-203ENST00000570557 ATP2B4P23634 1241 aa16.36■□□□□ 0.21
CHRNB1-203ENST00000570557 IGHMBP2P38935 993 aaKnown RBP16.36■□□□□ 0.21
CHRNB1-203ENST00000570557 IFIT5Q13325 482 aaKnown RBP16.36■□□□□ 0.21
CHRNB1-203ENST00000570557 ANKRD44Q8N8A2 993 aa16.36■□□□□ 0.21
CHRNB1-203ENST00000570557 EYA3Q99504 573 aa16.36■□□□□ 0.21
CHRNB1-203ENST00000570557 ANKIB1Q9P2G1 1089 aa16.36■□□□□ 0.21
CHRNB1-203ENST00000570557 SCN9AQ15858 1988 aa16.35■□□□□ 0.21
CHRNB1-203ENST00000570557 UFL1O94874 794 aa16.35■□□□□ 0.21
CHRNB1-203ENST00000570557 INTS3Q68E01 1043 aaKnown RBP16.35■□□□□ 0.21
CHRNB1-203ENST00000570557 GPR101Q96P66 508 aaPredicted RBP16.35■□□□□ 0.21
CHRNB1-203ENST00000570557 TAF1DQ9H5J8 278 aaPredicted RBP16.35■□□□□ 0.21
CHRNB1-203ENST00000570557 BICC1Q9H694 974 aaKnown RBP16.35■□□□□ 0.21
CHRNB1-203ENST00000570557 ADAMTSL1Q8N6G6 1762 aa16.35■□□□□ 0.21
CHRNB1-203ENST00000570557 IQCA1LA6NCM1 817 aa16.34■□□□□ 0.21
CHRNB1-203ENST00000570557 RIMBP2O15034 1052 aa16.34■□□□□ 0.21
CHRNB1-203ENST00000570557 TRIM27P14373 513 aa16.34■□□□□ 0.21
CHRNB1-203ENST00000570557 SCNN1DP51172 638 aa16.34■□□□□ 0.21
CHRNB1-203ENST00000570557 FSTL1Q12841 308 aa16.34■□□□□ 0.21
CHRNB1-203ENST00000570557 PSME4Q14997 1843 aa16.33■□□□□ 0.21
CHRNB1-203ENST00000570557 IPO8O15397 1037 aaKnown RBP16.33■□□□□ 0.2
CHRNB1-203ENST00000570557 CHRNDQ07001 517 aa16.33■□□□□ 0.2
CHRNB1-203ENST00000570557 CIAPIN1Q6FI81 312 aa16.33■□□□□ 0.2
CHRNB1-203ENST00000570557 ATF7IPQ6VMQ6 1270 aa16.33■□□□□ 0.2
CHRNB1-203ENST00000570557 C16orf71Q8IYS4 520 aaPredicted RBP16.33■□□□□ 0.2
CHRNB1-203ENST00000570557 ZNF594Q96JF6 807 aaPredicted RBP16.33■□□□□ 0.2
CHRNB1-203ENST00000570557 MPHOSPH8Q99549 860 aa16.33■□□□□ 0.2
CHRNB1-203ENST00000570557 ZC3H12CQ9C0D7 883 aaKnown RBP16.33■□□□□ 0.2
CHRNB1-203ENST00000570557 ANKRD2Q9GZV1 360 aa16.33■□□□□ 0.2
CHRNB1-203ENST00000570557 HACL1Q9UJ83 578 aa16.33■□□□□ 0.2
CHRNB1-203ENST00000570557 LEMD3Q9Y2U8 911 aa16.33■□□□□ 0.2
CHRNB1-203ENST00000570557 IRS2Q9Y4H2 1338 aa16.33■□□□□ 0.2
CHRNB1-203ENST00000570557 MED23Q9ULK4 1368 aa16.33■□□□□ 0.2
CHRNB1-203ENST00000570557 ECE2O60344 883 aa16.32■□□□□ 0.2
CHRNB1-203ENST00000570557 CCDC57Q2TAC2 916 aa16.32■□□□□ 0.2
CHRNB1-203ENST00000570557 DBNDD1Q9H9R9 158 aa16.32■□□□□ 0.2
CHRNB1-203ENST00000570557 KCNQ5Q9NR82 932 aa16.32■□□□□ 0.2
CHRNB1-203ENST00000570557 TNNQ9UQP3 1299 aa16.32■□□□□ 0.2
CHRNB1-203ENST00000570557 GJA3Q9Y6H8 435 aa16.32■□□□□ 0.2
CHRNB1-203ENST00000570557 ZNF646O15015 1829 aaPredicted RBP16.31■□□□□ 0.2
CHRNB1-203ENST00000570557 RAD17O75943 681 aa16.31■□□□□ 0.2
CHRNB1-203ENST00000570557 POTEIP0CG38 1075 aa16.31■□□□□ 0.2
CHRNB1-203ENST00000570557 POTEJP0CG39 1038 aa16.31■□□□□ 0.2
CHRNB1-203ENST00000570557 HSPA6P17066 643 aa16.31■□□□□ 0.2
CHRNB1-203ENST00000570557 EPHX2P34913 555 aa16.31■□□□□ 0.2
CHRNB1-203ENST00000570557 TNIP1Q15025 636 aa16.31■□□□□ 0.2
CHRNB1-203ENST00000570557 DOK7Q18PE1 504 aa16.31■□□□□ 0.2
CHRNB1-203ENST00000570557 SMC1BQ8NDV3 1235 aa16.31■□□□□ 0.2
CHRNB1-203ENST00000570557 CHMP3Q9Y3E7 222 aa16.31■□□□□ 0.2
CHRNB1-203ENST00000570557 ZNF609O15014 1411 aa16.3■□□□□ 0.2
CHRNB1-203ENST00000570557 ZNF804BA4D1E1 1349 aa16.3■□□□□ 0.2
CHRNB1-203ENST00000570557 EPS15P42566 896 aa16.3■□□□□ 0.2
CHRNB1-203ENST00000570557 RFX5P48382 616 aaPredicted RBP16.3■□□□□ 0.2
CHRNB1-203ENST00000570557 C15orf52Q6ZUT6 534 aaKnown RBP16.3■□□□□ 0.2
CHRNB1-203ENST00000570557 TXNRD3Q86VQ6 643 aa16.3■□□□□ 0.2
CHRNB1-203ENST00000570557 GPRC5DQ9NZD1 345 aa16.3■□□□□ 0.2
CHRNB1-203ENST00000570557 RIPOR2Q9Y4F9 1068 aa16.3■□□□□ 0.2
CHRNB1-203ENST00000570557 PSMD14O00487 310 aa16.29■□□□□ 0.2
CHRNB1-203ENST00000570557 VIL1P09327 827 aaKnown RBP16.29■□□□□ 0.2
CHRNB1-203ENST00000570557 GMPSP49915 693 aaPredicted RBP16.29■□□□□ 0.2
CHRNB1-203ENST00000570557 ZKSCAN2Q63HK3 967 aa16.29■□□□□ 0.2
CHRNB1-203ENST00000570557 LDHAL6AQ6ZMR3 332 aa16.29■□□□□ 0.2
CHRNB1-203ENST00000570557 PODNQ7Z5L7 613 aa16.29■□□□□ 0.2
CHRNB1-203ENST00000570557 DPF2Q92785 391 aa16.29■□□□□ 0.2
CHRNB1-203ENST00000570557 MEIS3Q99687 375 aa16.29■□□□□ 0.2
CHRNB1-203ENST00000570557 PUS3Q9BZE2 481 aaKnown RBP16.29■□□□□ 0.2
CHRNB1-203ENST00000570557 TAF5LO75529 589 aa16.28■□□□□ 0.2
CHRNB1-203ENST00000570557 UBTFL1P0CB47 393 aaPredicted RBP16.28■□□□□ 0.2
CHRNB1-203ENST00000570557 KLRK1P26718 216 aa16.28■□□□□ 0.2
CHRNB1-203ENST00000570557 CHADLQ6NUI6 762 aa16.28■□□□□ 0.2
CHRNB1-203ENST00000570557 PNMA8AQ86V59 439 aaPredicted RBP16.28■□□□□ 0.2
CHRNB1-203ENST00000570557 LDHDQ86WU2 507 aa16.28■□□□□ 0.2
CHRNB1-203ENST00000570557 FRAT1Q92837 279 aaPredicted RBP16.28■□□□□ 0.2
CHRNB1-203ENST00000570557 SNAP23O00161 211 aa16.27■□□□□ 0.2
CHRNB1-203ENST00000570557 USP50Q70EL3 339 aaPredicted RBP16.27■□□□□ 0.2
CHRNB1-203ENST00000570557 HELBQ8NG08 1087 aaPredicted RBP16.27■□□□□ 0.2
CHRNB1-203ENST00000570557 RPS12P25398 132 aaKnown RBP16.26■□□□□ 0.19
CHRNB1-203ENST00000570557 LMOD1P29536 600 aaPredicted RBP16.26■□□□□ 0.19
CHRNB1-203ENST00000570557 TAF7LQ5H9L4 462 aa16.26■□□□□ 0.19
CHRNB1-203ENST00000570557 TMEM57Q8N5G2 664 aa16.26■□□□□ 0.19
CHRNB1-203ENST00000570557 GMLQ99445 158 aa16.26■□□□□ 0.19
CHRNB1-203ENST00000570557 COA1Q9GZY4 146 aa16.26■□□□□ 0.19
CHRNB1-203ENST00000570557 CNNM1Q9NRU3 951 aa16.26■□□□□ 0.19
CHRNB1-203ENST00000570557 ADARB2Q9NS39 739 aaKnown RBP16.26■□□□□ 0.19
CHRNB1-203ENST00000570557 HDAC5Q9UQL6 1122 aa16.26■□□□□ 0.19
CHRNB1-203ENST00000570557 ZBTB12Q9Y330 459 aaPredicted RBP16.26■□□□□ 0.19
CHRNB1-203ENST00000570557 LRRFIP2Q9Y608 721 aaKnown RBP16.26■□□□□ 0.19
CHRNB1-203ENST00000570557 ITGBL1O95965 494 aaPredicted RBP16.25■□□□□ 0.19
CHRNB1-203ENST00000570557 GNAI3P08754 354 aa16.25■□□□□ 0.19
CHRNB1-203ENST00000570557 PTPN12Q05209 780 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms