RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 ANKIB1Q9P2G1 1089 aa27.23■■□□□ 1.95
PKD1-240ENST00000570253 POLLQ9UGP5 575 aa27.23■■□□□ 1.95
PKD1-240ENST00000570253 DOK7Q18PE1 504 aa27.22■■□□□ 1.95
PKD1-240ENST00000570253 SAMD7Q7Z3H4 446 aa27.22■■□□□ 1.95
PKD1-240ENST00000570253 KRT26Q7Z3Y9 468 aa27.22■■□□□ 1.95
PKD1-240ENST00000570253 TBC1D16Q8TBP0 767 aa27.22■■□□□ 1.95
PKD1-240ENST00000570253 SHTN1A0MZ66 631 aa27.21■■□□□ 1.95
PKD1-240ENST00000570253 RBM26Q5T8P6 1007 aaKnown RBP27.21■■□□□ 1.95
PKD1-240ENST00000570253 C2orf69Q8N8R5 385 aa27.21■■□□□ 1.95
PKD1-240ENST00000570253 CCDC191Q8NCU4 936 aa27.21■■□□□ 1.95
PKD1-240ENST00000570253 MYD88Q99836 296 aa27.21■■□□□ 1.95
PKD1-240ENST00000570253 TSKSQ9UJT2 592 aa27.21■■□□□ 1.95
PKD1-240ENST00000570253 UFL1O94874 794 aa27.2■■□□□ 1.94
PKD1-240ENST00000570253 GGA1Q9UJY5 639 aa27.2■■□□□ 1.94
PKD1-240ENST00000570253 CCDC85CA6NKD9 419 aa27.19■■□□□ 1.94
PKD1-240ENST00000570253 CWC25Q9NXE8 425 aaPredicted RBP27.19■■□□□ 1.94
PKD1-240ENST00000570253 PODXL2Q9NZ53 605 aa27.19■■□□□ 1.94
PKD1-240ENST00000570253 ELL2O00472 640 aaPredicted RBP27.18■■□□□ 1.94
PKD1-240ENST00000570253 PDE8AO60658 829 aa27.18■■□□□ 1.94
PKD1-240ENST00000570253 KIF4BQ2VIQ3 1234 aa27.18■■□□□ 1.94
PKD1-240ENST00000570253 SULF1Q8IWU6 871 aa27.18■■□□□ 1.94
PKD1-240ENST00000570253 PHAXQ9H814 394 aaKnown RBP27.18■■□□□ 1.94
PKD1-240ENST00000570253 GBA2Q9HCG7 927 aaPredicted RBP27.18■■□□□ 1.94
PKD1-240ENST00000570253 APAF1O14727 1248 aa27.17■■□□□ 1.94
PKD1-240ENST00000570253 PCCAP05165 728 aaPredicted RBP27.17■■□□□ 1.94
PKD1-240ENST00000570253 ZNF853P0CG23 659 aa27.17■■□□□ 1.94
PKD1-240ENST00000570253 CCDC30Q5VVM6 783 aa27.17■■□□□ 1.94
PKD1-240ENST00000570253 CCDC102AQ96A19 550 aa27.16■■□□□ 1.94
PKD1-240ENST00000570253 PRKRIP1Q9H875 184 aaPredicted RBP27.16■■□□□ 1.94
PKD1-240ENST00000570253 RTL9Q8NET4 1388 aa27.15■■□□□ 1.94
PKD1-240ENST00000570253 RGMBQ6NW40 437 aa27.15■■□□□ 1.94
PKD1-240ENST00000570253 ANKRD18AQ8IVF6 992 aa27.15■■□□□ 1.94
PKD1-240ENST00000570253 SEC31BQ9NQW1 1179 aa27.15■■□□□ 1.94
PKD1-240ENST00000570253 VIL1P09327 827 aaKnown RBP27.14■■□□□ 1.94
PKD1-240ENST00000570253 XDHP47989 1333 aa27.14■■□□□ 1.93
PKD1-240ENST00000570253 AGBL3Q8NEM8 1001 aa27.13■■□□□ 1.93
PKD1-240ENST00000570253 CDC5LQ99459 802 aaKnown RBP27.13■■□□□ 1.93
PKD1-240ENST00000570253 METTL22Q9BUU2 404 aaPredicted RBP27.13■■□□□ 1.93
PKD1-240ENST00000570253 KCNQ5Q9NR82 932 aa27.13■■□□□ 1.93
PKD1-240ENST00000570253 GGA3Q9NZ52 723 aa27.13■■□□□ 1.93
PKD1-240ENST00000570253 POLR2AP24928 1970 aaKnown RBP27.12■■□□□ 1.93
PKD1-240ENST00000570253 ADM5C9JUS6 153 aa27.12■■□□□ 1.93
PKD1-240ENST00000570253 EGFRP00533 1210 aa27.11■■□□□ 1.93
PKD1-240ENST00000570253 ATP2B4P23634 1241 aa27.11■■□□□ 1.93
PKD1-240ENST00000570253 ZNF157P51786 506 aaPredicted RBP27.11■■□□□ 1.93
PKD1-240ENST00000570253 NEXNQ0ZGT2 675 aa27.11■■□□□ 1.93
PKD1-240ENST00000570253 FAM161AQ3B820 660 aa27.11■■□□□ 1.93
PKD1-240ENST00000570253 CCDC85AQ96PX6 553 aaPredicted RBP27.11■■□□□ 1.93
PKD1-240ENST00000570253 RSBN1LQ6PCB5 846 aaPredicted RBP27.1■■□□□ 1.93
PKD1-240ENST00000570253 STK31Q9BXU1 1019 aa27.1■■□□□ 1.93
PKD1-240ENST00000570253 MCOLN1Q9GZU1 580 aa27.1■■□□□ 1.93
PKD1-240ENST00000570253 COL4A1P02462 1669 aa27.1■■□□□ 1.93
PKD1-240ENST00000570253 CASP8AP2Q9UKL3 1982 aa27.09■■□□□ 1.93
PKD1-240ENST00000570253 MLLT1Q03111 559 aaPredicted RBP27.09■■□□□ 1.93
PKD1-240ENST00000570253 DGKZQ13574 1117 aa27.09■■□□□ 1.93
PKD1-240ENST00000570253 PODNQ7Z5L7 613 aa27.08■■□□□ 1.93
PKD1-240ENST00000570253 C8orf58Q8NAV2 365 aa27.08■■□□□ 1.93
PKD1-240ENST00000570253 SAGE1Q9NXZ1 904 aa27.08■■□□□ 1.93
PKD1-240ENST00000570253 MAP3K2Q9Y2U5 619 aa27.08■■□□□ 1.93
PKD1-240ENST00000570253 SCN9AQ15858 1988 aa27.08■■□□□ 1.92
PKD1-240ENST00000570253 ZNF609O15014 1411 aa27.07■■□□□ 1.92
PKD1-240ENST00000570253 DLK2Q6UY11 383 aa27.07■■□□□ 1.92
PKD1-240ENST00000570253 USP17L8P0C7I0 530 aa27.06■■□□□ 1.92
PKD1-240ENST00000570253 CTSWP56202 376 aa27.06■■□□□ 1.92
PKD1-240ENST00000570253 ZNF280AP59817 542 aaPredicted RBP27.06■■□□□ 1.92
PKD1-240ENST00000570253 KSR2Q6VAB6 950 aa27.06■■□□□ 1.92
PKD1-240ENST00000570253 JARID2Q92833 1246 aaPredicted RBP27.06■■□□□ 1.92
PKD1-240ENST00000570253 CDCA5Q96FF9 252 aa27.06■■□□□ 1.92
PKD1-240ENST00000570253 USP17L3A6NCW0 530 aa27.05■■□□□ 1.92
PKD1-240ENST00000570253 USP17L4A6NCW7 530 aa27.05■■□□□ 1.92
PKD1-240ENST00000570253 KIF23Q02241 960 aaPredicted RBP27.05■■□□□ 1.92
PKD1-240ENST00000570253 SCARF1Q14162 830 aa27.05■■□□□ 1.92
PKD1-240ENST00000570253 ANGEL2Q5VTE6 544 aaKnown RBP27.05■■□□□ 1.92
PKD1-240ENST00000570253 USP17L1Q7RTZ2 530 aa27.05■■□□□ 1.92
PKD1-240ENST00000570253 REM2Q8IYK8 340 aaPredicted RBP27.05■■□□□ 1.92
PKD1-240ENST00000570253 PSME4Q14997 1843 aa27.04■■□□□ 1.92
PKD1-240ENST00000570253 FAM155AB1AL88 458 aaPredicted RBP27.04■■□□□ 1.92
PKD1-240ENST00000570253 ZIC5Q96T25 663 aa27.04■■□□□ 1.92
PKD1-240ENST00000570253 MYOZ2Q9NPC6 264 aa27.04■■□□□ 1.92
PKD1-240ENST00000570253 MYH3P11055 1940 aa27.03■■□□□ 1.92
PKD1-240ENST00000570253 FKBP1BP68106 108 aa27.03■■□□□ 1.92
PKD1-240ENST00000570253 PITPNM2Q9BZ72 1349 aa27.03■■□□□ 1.92
PKD1-240ENST00000570253 AKAP11Q9UKA4 1901 aa27.02■■□□□ 1.92
PKD1-240ENST00000570253 PI4KAP2A4QPH2 592 aa27.02■■□□□ 1.92
PKD1-240ENST00000570253 SLC10A3P09131 477 aa27.02■■□□□ 1.92
PKD1-240ENST00000570253 OGFOD1Q8N543 542 aa27.02■■□□□ 1.92
PKD1-240ENST00000570253 PI4KAP1Q8N8J0 262 aa27.02■■□□□ 1.92
PKD1-240ENST00000570253 BSDC1Q9NW68 430 aaPredicted RBP27.02■■□□□ 1.92
PKD1-240ENST00000570253 MED23Q9ULK4 1368 aa27.01■■□□□ 1.91
PKD1-240ENST00000570253 MYO3BQ8WXR4 1341 aa27■■□□□ 1.91
PKD1-240ENST00000570253 IGHMBP2P38935 993 aaKnown RBP27■■□□□ 1.91
PKD1-240ENST00000570253 RGS19P49795 217 aa27■■□□□ 1.91
PKD1-240ENST00000570253 FBXW7Q969H0 707 aa27■■□□□ 1.91
PKD1-240ENST00000570253 ASTN2O75129 1339 aaPredicted RBP26.99■■□□□ 1.91
PKD1-240ENST00000570253 TTLL11Q8NHH1 800 aa26.99■■□□□ 1.91
PKD1-240ENST00000570253 TRPA1O75762 1119 aa26.98■■□□□ 1.91
PKD1-240ENST00000570253 NF2P35240 595 aa26.98■■□□□ 1.91
PKD1-240ENST00000570253 TSPYL6Q8N831 410 aa26.98■■□□□ 1.91
PKD1-240ENST00000570253 RNF186Q9NXI6 227 aa26.98■■□□□ 1.91
PKD1-240ENST00000570253 MINPP1Q9UNW1 487 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms