RNA–Protein interactions for RNA: ENST00000569936.5

STRA6-210, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 1 (best)

Gene STRA6, Length 2,151 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-210ENST00000569936 ADRA2BP18089 450 aa17.55■□□□□ 0.4
STRA6-210ENST00000569936 NEK4P51957 841 aa17.55■□□□□ 0.4
STRA6-210ENST00000569936 ZBTB38Q8NAP3 1195 aaPredicted RBP17.55■□□□□ 0.4
STRA6-210ENST00000569936 FAM89AQ96GI7 184 aa17.55■□□□□ 0.4
STRA6-210ENST00000569936 PCCAP05165 728 aaPredicted RBP17.55■□□□□ 0.4
STRA6-210ENST00000569936 HMGN5P82970 282 aaKnown RBP17.55■□□□□ 0.4
STRA6-210ENST00000569936 EN1Q05925 392 aaPredicted RBP17.55■□□□□ 0.4
STRA6-210ENST00000569936 SSH3Q8TE77 659 aa17.55■□□□□ 0.4
STRA6-210ENST00000569936 PIBF1Q8WXW3 757 aa17.55■□□□□ 0.4
STRA6-210ENST00000569936 TRMT112Q9UI30 125 aaKnown RBP17.55■□□□□ 0.4
STRA6-210ENST00000569936 MTX1Q13505 466 aa17.54■□□□□ 0.4
STRA6-210ENST00000569936 EPHA10Q5JZY3 1008 aa17.54■□□□□ 0.4
STRA6-210ENST00000569936 UTP14CQ5TAP6 766 aaKnown RBP17.54■□□□□ 0.4
STRA6-210ENST00000569936 FAM177BA6PVY3 158 aa17.53■□□□□ 0.4
STRA6-210ENST00000569936 RGL2O15211 777 aa17.53■□□□□ 0.4
STRA6-210ENST00000569936 MCCP23508 829 aa17.53■□□□□ 0.4
STRA6-210ENST00000569936 PDE1AP54750 535 aa17.53■□□□□ 0.4
STRA6-210ENST00000569936 PARP10Q53GL7 1025 aa17.53■□□□□ 0.4
STRA6-210ENST00000569936 KLHL34Q8N239 644 aa17.53■□□□□ 0.4
STRA6-210ENST00000569936 TFCP2L1Q9NZI6 479 aa17.53■□□□□ 0.4
STRA6-210ENST00000569936 POLA2Q14181 598 aa17.53■□□□□ 0.4
STRA6-210ENST00000569936 EZH2Q15910 746 aaKnown RBP17.53■□□□□ 0.4
STRA6-210ENST00000569936 TMEM87AQ8NBN3 555 aa17.53■□□□□ 0.4
STRA6-210ENST00000569936 BCL2L12Q9HB09 334 aa17.53■□□□□ 0.4
STRA6-210ENST00000569936 USP42Q9H9J4 1324 aaKnown RBP17.53■□□□□ 0.4
STRA6-210ENST00000569936 MYH3P11055 1940 aa17.52■□□□□ 0.4
STRA6-210ENST00000569936 BAG6P46379 1132 aa17.52■□□□□ 0.4
STRA6-210ENST00000569936 SUSD4Q5VX71 490 aa17.52■□□□□ 0.4
STRA6-210ENST00000569936 BICDL1Q6ZP65 573 aa17.52■□□□□ 0.4
STRA6-210ENST00000569936 CAMKK2Q96RR4 588 aa17.52■□□□□ 0.4
STRA6-210ENST00000569936 ESYT1Q9BSJ8 1104 aa17.52■□□□□ 0.4
STRA6-210ENST00000569936 APBB1O00213 710 aa17.52■□□□□ 0.39
STRA6-210ENST00000569936 ZNF827Q17R98 1081 aa17.52■□□□□ 0.39
STRA6-210ENST00000569936 UTP14AQ9BVJ6 771 aaKnown RBP17.52■□□□□ 0.39
STRA6-210ENST00000569936 EXOC6BQ9Y2D4 811 aa17.52■□□□□ 0.39
STRA6-210ENST00000569936 FOXO4P98177 505 aa17.51■□□□□ 0.39
STRA6-210ENST00000569936 FOXD4L5Q5VV16 416 aaPredicted RBP17.51■□□□□ 0.39
STRA6-210ENST00000569936 TBC1D9BQ66K14 1250 aa17.51■□□□□ 0.39
STRA6-210ENST00000569936 SYNE4Q8N205 404 aa17.51■□□□□ 0.39
STRA6-210ENST00000569936 FOXD4L4Q8WXT5 416 aaPredicted RBP17.51■□□□□ 0.39
STRA6-210ENST00000569936 AKT1S1Q96B36 256 aa17.51■□□□□ 0.39
STRA6-210ENST00000569936 SALL3Q9BXA9 1300 aa17.51■□□□□ 0.39
STRA6-210ENST00000569936 CDHR2Q9BYE9 1310 aa17.51■□□□□ 0.39
STRA6-210ENST00000569936 RABL6Q3YEC7 729 aaPredicted RBP17.5■□□□□ 0.39
STRA6-210ENST00000569936 LMBR1LQ6UX01 489 aa17.5■□□□□ 0.39
STRA6-210ENST00000569936 SPTLC3Q9NUV7 552 aa17.5■□□□□ 0.39
STRA6-210ENST00000569936 CHMP3Q9Y3E7 222 aa17.5■□□□□ 0.39
STRA6-210ENST00000569936 EPB41L2O43491 1005 aaKnown RBP17.5■□□□□ 0.39
STRA6-210ENST00000569936 SURF6O75683 361 aaKnown RBP17.5■□□□□ 0.39
STRA6-210ENST00000569936 WDR33Q9C0J8 1336 aaKnown RBP17.5■□□□□ 0.39
STRA6-210ENST00000569936 IRS4O14654 1257 aaPredicted RBP17.49■□□□□ 0.39
STRA6-210ENST00000569936 LETM1O95202 739 aaPredicted RBP17.49■□□□□ 0.39
STRA6-210ENST00000569936 DMTNQ08495 405 aa17.49■□□□□ 0.39
STRA6-210ENST00000569936 NOLC1Q14978 699 aaKnown RBP eCLIP17.49■□□□□ 0.39
STRA6-210ENST00000569936 SETDB2Q96T68 719 aa17.49■□□□□ 0.39
STRA6-210ENST00000569936 SH3TC1Q8TE82 1336 aa17.49■□□□□ 0.39
STRA6-210ENST00000569936 DEFB132Q7Z7B7 95 aa17.49■□□□□ 0.39
STRA6-210ENST00000569936 CCDC183Q5T5S1 534 aa17.48■□□□□ 0.39
STRA6-210ENST00000569936 PLA2G12BQ9BX93 195 aa17.48■□□□□ 0.39
STRA6-210ENST00000569936 NTSR2O95665 410 aa17.47■□□□□ 0.39
STRA6-210ENST00000569936 DNTTIP2Q5QJE6 756 aaKnown RBP17.47■□□□□ 0.39
STRA6-210ENST00000569936 USP48Q86UV5 1035 aa17.47■□□□□ 0.39
STRA6-210ENST00000569936 ZNF710Q8N1W2 664 aa17.47■□□□□ 0.39
STRA6-210ENST00000569936 RPAP1Q9BWH6 1393 aaPredicted RBP17.47■□□□□ 0.39
STRA6-210ENST00000569936 COL24A1Q17RW2 1714 aa17.47■□□□□ 0.39
STRA6-210ENST00000569936 GADD45BO75293 160 aaPredicted RBP17.47■□□□□ 0.39
STRA6-210ENST00000569936 OS9Q13438 667 aaPredicted RBP17.47■□□□□ 0.39
STRA6-210ENST00000569936 PALD1Q9ULE6 856 aa17.47■□□□□ 0.39
STRA6-210ENST00000569936 PA2G4Q9UQ80 394 aaKnown RBP17.47■□□□□ 0.39
STRA6-210ENST00000569936 DDX60Q8IY21 1712 aaKnown RBP17.47■□□□□ 0.39
STRA6-210ENST00000569936 PDE8AO60658 829 aa17.46■□□□□ 0.39
STRA6-210ENST00000569936 HSP90AB4PQ58FF6 505 aa17.46■□□□□ 0.39
STRA6-210ENST00000569936 NUTM1Q86Y26 1132 aa17.46■□□□□ 0.39
STRA6-210ENST00000569936 LAMB2P55268 1798 aa17.46■□□□□ 0.39
STRA6-210ENST00000569936 GYS1P13807 737 aa17.46■□□□□ 0.39
STRA6-210ENST00000569936 GTF2E1P29083 439 aaPredicted RBP17.46■□□□□ 0.39
STRA6-210ENST00000569936 CCDC125Q86Z20 511 aa17.46■□□□□ 0.39
STRA6-210ENST00000569936 FLAD1Q8NFF5 587 aa17.46■□□□□ 0.39
STRA6-210ENST00000569936 KLHDC4Q8TBB5 520 aa17.46■□□□□ 0.39
STRA6-210ENST00000569936 LRRCC1Q9C099 1032 aa17.46■□□□□ 0.39
STRA6-210ENST00000569936 RAB11FIP3O75154 756 aa17.45■□□□□ 0.38
STRA6-210ENST00000569936 HCLS1P14317 486 aaPredicted RBP17.45■□□□□ 0.38
STRA6-210ENST00000569936 CHMLP26374 656 aa17.45■□□□□ 0.38
STRA6-210ENST00000569936 NBPF5PQ86XG9 351 aaPredicted RBP17.45■□□□□ 0.38
STRA6-210ENST00000569936 COL23A1Q86Y22 540 aaPredicted RBP17.45■□□□□ 0.38
STRA6-210ENST00000569936 CCDC85AQ96PX6 553 aaPredicted RBP17.45■□□□□ 0.38
STRA6-210ENST00000569936 NYXQ9GZU5 481 aa17.45■□□□□ 0.38
STRA6-210ENST00000569936 ADCY5O95622 1261 aa17.45■□□□□ 0.38
STRA6-210ENST00000569936 HSP90B1P14625 803 aaKnown RBP17.45■□□□□ 0.38
STRA6-210ENST00000569936 ZSCAN20P17040 1043 aaPredicted RBP17.45■□□□□ 0.38
STRA6-210ENST00000569936 CTSWP56202 376 aa17.45■□□□□ 0.38
STRA6-210ENST00000569936 SIL1Q9H173 461 aa17.45■□□□□ 0.38
STRA6-210ENST00000569936 STK32BQ9NY57 414 aa17.45■□□□□ 0.38
STRA6-210ENST00000569936 USP25Q9UHP3 1055 aa17.45■□□□□ 0.38
STRA6-210ENST00000569936 MX1P20591 662 aa17.44■□□□□ 0.38
STRA6-210ENST00000569936 RFX5P48382 616 aaPredicted RBP17.44■□□□□ 0.38
STRA6-210ENST00000569936 G3BP1Q13283 466 aaKnown RBP eCLIP17.44■□□□□ 0.38
STRA6-210ENST00000569936 NFIXQ14938 502 aa17.44■□□□□ 0.38
STRA6-210ENST00000569936 ERFEQ4G0M1 354 aa17.44■□□□□ 0.38
STRA6-210ENST00000569936 CSF1RP07333 972 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms