RNA–Protein interactions for RNA: ENST00000569829.1

RPAP1-212, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 597 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-212ENST00000569829 CDCA5Q96FF9 252 aa13.29□□□□□ -0.28
RPAP1-212ENST00000569829 FAM89AQ96GI7 184 aa13.29□□□□□ -0.28
RPAP1-212ENST00000569829 SAGE1Q9NXZ1 904 aa13.29□□□□□ -0.28
RPAP1-212ENST00000569829 HPS5Q9UPZ3 1129 aa13.29□□□□□ -0.28
RPAP1-212ENST00000569829 LRRC37AA6NMS7 1700 aa13.29□□□□□ -0.28
RPAP1-212ENST00000569829 ERBB4Q15303 1308 aa13.29□□□□□ -0.28
RPAP1-212ENST00000569829 SH3TC1Q8TE82 1336 aa13.29□□□□□ -0.28
RPAP1-212ENST00000569829 HTTP42858 3142 aa13.28□□□□□ -0.28
RPAP1-212ENST00000569829 ATP5J2-PTCD1G3V325 749 aa13.28□□□□□ -0.28
RPAP1-212ENST00000569829 CTU1Q7Z7A3 348 aaKnown RBP13.28□□□□□ -0.28
RPAP1-212ENST00000569829 TBC1D8O95759 1140 aa13.27□□□□□ -0.29
RPAP1-212ENST00000569829 ANGEL2Q5VTE6 544 aaKnown RBP13.27□□□□□ -0.29
RPAP1-212ENST00000569829 PRPF38BQ5VTL8 546 aaKnown RBP13.27□□□□□ -0.29
RPAP1-212ENST00000569829 TBC1D16Q8TBP0 767 aa13.27□□□□□ -0.29
RPAP1-212ENST00000569829 WTIPA6NIX2 430 aaPredicted RBP13.26□□□□□ -0.29
RPAP1-212ENST00000569829 MKRN3Q13064 507 aaKnown RBP13.26□□□□□ -0.29
RPAP1-212ENST00000569829 MYBBP1AQ9BQG0 1328 aaKnown RBP13.26□□□□□ -0.29
RPAP1-212ENST00000569829 SEC31BQ9NQW1 1179 aa13.26□□□□□ -0.29
RPAP1-212ENST00000569829 UBE2Q2LH0YL09 131 aa13.25□□□□□ -0.29
RPAP1-212ENST00000569829 RIPK4P57078 832 aa13.25□□□□□ -0.29
RPAP1-212ENST00000569829 SCARF1Q14162 830 aa13.25□□□□□ -0.29
RPAP1-212ENST00000569829 HSP90AB3PQ58FF7 597 aa13.25□□□□□ -0.29
RPAP1-212ENST00000569829 SULF1Q8IWU6 871 aa13.25□□□□□ -0.29
RPAP1-212ENST00000569829 ZNF296Q8WUU4 475 aaPredicted RBP13.25□□□□□ -0.29
RPAP1-212ENST00000569829 JARID2Q92833 1246 aaPredicted RBP13.25□□□□□ -0.29
RPAP1-212ENST00000569829 R3HDMLQ9H3Y0 253 aa13.25□□□□□ -0.29
RPAP1-212ENST00000569829 CHPF2Q9P2E5 772 aa13.25□□□□□ -0.29
RPAP1-212ENST00000569829 VIL1P09327 827 aaKnown RBP13.24□□□□□ -0.29
RPAP1-212ENST00000569829 SF3B3Q15393 1217 aaKnown RBP13.24□□□□□ -0.29
RPAP1-212ENST00000569829 CCDC85AQ96PX6 553 aaPredicted RBP13.24□□□□□ -0.29
RPAP1-212ENST00000569829 ISCA1Q9BUE6 129 aa13.24□□□□□ -0.29
RPAP1-212ENST00000569829 MXD3Q9BW11 206 aa13.24□□□□□ -0.29
RPAP1-212ENST00000569829 PRKRIP1Q9H875 184 aaPredicted RBP13.24□□□□□ -0.29
RPAP1-212ENST00000569829 MAPK8IP3Q9UPT6 1336 aa13.23□□□□□ -0.29
RPAP1-212ENST00000569829 RPS12P25398 132 aaKnown RBP13.23□□□□□ -0.29
RPAP1-212ENST00000569829 ZEB1P37275 1124 aaPredicted RBP13.23□□□□□ -0.29
RPAP1-212ENST00000569829 BABAM1Q9NWV8 329 aa13.23□□□□□ -0.29
RPAP1-212ENST00000569829 UFL1O94874 794 aa13.22□□□□□ -0.29
RPAP1-212ENST00000569829 TMPOP42166 694 aaKnown RBP13.22□□□□□ -0.29
RPAP1-212ENST00000569829 NEUROD2Q15784 382 aa13.22□□□□□ -0.29
RPAP1-212ENST00000569829 HDAC9Q9UKV0 1011 aa13.22□□□□□ -0.29
RPAP1-212ENST00000569829 FZD1Q9UP38 647 aa13.22□□□□□ -0.29
RPAP1-212ENST00000569829 IRS4O14654 1257 aaPredicted RBP13.21□□□□□ -0.29
RPAP1-212ENST00000569829 ZNF280AP59817 542 aaPredicted RBP13.21□□□□□ -0.29
RPAP1-212ENST00000569829 RPS8P62241 208 aaKnown RBP13.21□□□□□ -0.29
RPAP1-212ENST00000569829 NBPF9Q3BBW0 867 aa13.21□□□□□ -0.29
RPAP1-212ENST00000569829 RSBN1LQ6PCB5 846 aaPredicted RBP13.21□□□□□ -0.29
RPAP1-212ENST00000569829 TMC4Q7Z404 712 aa13.21□□□□□ -0.29
RPAP1-212ENST00000569829 ZC3H12CQ9C0D7 883 aaKnown RBP13.21□□□□□ -0.29
RPAP1-212ENST00000569829 LAS1LQ9Y4W2 734 aaKnown RBP13.21□□□□□ -0.29
RPAP1-212ENST00000569829 SZT2Q5T011 3432 aa13.2□□□□□ -0.3
RPAP1-212ENST00000569829 PRKG1Q13976 671 aa13.2□□□□□ -0.3
RPAP1-212ENST00000569829 ANKRD13DQ6ZTN6 518 aa13.2□□□□□ -0.3
RPAP1-212ENST00000569829 CCDC146Q8IYE0 955 aa13.2□□□□□ -0.3
RPAP1-212ENST00000569829 PLBD2Q8NHP8 589 aa13.2□□□□□ -0.3
RPAP1-212ENST00000569829 EYA3Q99504 573 aa13.2□□□□□ -0.3
RPAP1-212ENST00000569829 MYOZ2Q9NPC6 264 aa13.2□□□□□ -0.3
RPAP1-212ENST00000569829 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.2□□□□□ -0.3
RPAP1-212ENST00000569829 ADAMTS8Q9UP79 889 aa13.2□□□□□ -0.3
RPAP1-212ENST00000569829 GPR25O00155 361 aa13.19□□□□□ -0.3
RPAP1-212ENST00000569829 RUNDC1Q96C34 613 aa13.19□□□□□ -0.3
RPAP1-212ENST00000569829 GMLQ99445 158 aa13.19□□□□□ -0.3
RPAP1-212ENST00000569829 ANKIB1Q9P2G1 1089 aa13.19□□□□□ -0.3
RPAP1-212ENST00000569829 PAPPA2Q9BXP8 1791 aa13.18□□□□□ -0.3
RPAP1-212ENST00000569829 G3V3G9 751 aa13.18□□□□□ -0.3
RPAP1-212ENST00000569829 LMOD3Q0VAK6 560 aa13.18□□□□□ -0.3
RPAP1-212ENST00000569829 TTLL12Q14166 644 aaPredicted RBP13.18□□□□□ -0.3
RPAP1-212ENST00000569829 DCAF8Q5TAQ9 597 aa13.18□□□□□ -0.3
RPAP1-212ENST00000569829 HDGFL1Q5TGJ6 251 aa13.18□□□□□ -0.3
RPAP1-212ENST00000569829 PODXL2Q9NZ53 605 aa13.18□□□□□ -0.3
RPAP1-212ENST00000569829 POTEFA5A3E0 1075 aa13.17□□□□□ -0.3
RPAP1-212ENST00000569829 CHL1O00533 1208 aa13.17□□□□□ -0.3
RPAP1-212ENST00000569829 USP17L8P0C7I0 530 aa13.17□□□□□ -0.3
RPAP1-212ENST00000569829 PHAXQ9H814 394 aaKnown RBP13.17□□□□□ -0.3
RPAP1-212ENST00000569829 GGA1Q9UJY5 639 aa13.17□□□□□ -0.3
RPAP1-212ENST00000569829 TRIM35Q9UPQ4 493 aa13.17□□□□□ -0.3
RPAP1-212ENST00000569829 PSME4Q14997 1843 aa13.16□□□□□ -0.3
RPAP1-212ENST00000569829 SASH1O94885 1247 aa13.16□□□□□ -0.3
RPAP1-212ENST00000569829 TM4SF4P48230 202 aa13.16□□□□□ -0.3
RPAP1-212ENST00000569829 PTPN12Q05209 780 aaKnown RBP13.16□□□□□ -0.3
RPAP1-212ENST00000569829 AGBL3Q8NEM8 1001 aa13.16□□□□□ -0.3
RPAP1-212ENST00000569829 FKBP1BP68106 108 aa13.15□□□□□ -0.3
RPAP1-212ENST00000569829 WDR43Q15061 677 aaKnown RBP eCLIP13.15□□□□□ -0.3
RPAP1-212ENST00000569829 FBXO46Q6PJ61 603 aaPredicted RBP13.15□□□□□ -0.3
RPAP1-212ENST00000569829 FBXW7Q969H0 707 aa13.15□□□□□ -0.3
RPAP1-212ENST00000569829 MYD88Q99836 296 aa13.15□□□□□ -0.3
RPAP1-212ENST00000569829 KIAA0100Q14667 2235 aaKnown RBP13.15□□□□□ -0.31
RPAP1-212ENST00000569829 ZNF646O15015 1829 aaPredicted RBP13.14□□□□□ -0.31
RPAP1-212ENST00000569829 USP17L3A6NCW0 530 aa13.14□□□□□ -0.31
RPAP1-212ENST00000569829 USP17L4A6NCW7 530 aa13.14□□□□□ -0.31
RPAP1-212ENST00000569829 WNT10BO00744 389 aa13.14□□□□□ -0.31
RPAP1-212ENST00000569829 CAP1Q01518 475 aa13.14□□□□□ -0.31
RPAP1-212ENST00000569829 PKN2Q16513 984 aaKnown RBP13.14□□□□□ -0.31
RPAP1-212ENST00000569829 HABP4Q5JVS0 413 aaKnown RBP13.14□□□□□ -0.31
RPAP1-212ENST00000569829 USP17L1Q7RTZ2 530 aa13.14□□□□□ -0.31
RPAP1-212ENST00000569829 TXNRD3Q86VQ6 643 aa13.14□□□□□ -0.31
RPAP1-212ENST00000569829 REM2Q8IYK8 340 aaPredicted RBP13.14□□□□□ -0.31
RPAP1-212ENST00000569829 PITPNM2Q9BZ72 1349 aa13.13□□□□□ -0.31
RPAP1-212ENST00000569829 ELL2O00472 640 aaPredicted RBP13.13□□□□□ -0.31
RPAP1-212ENST00000569829 FKTNO75072 461 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms