RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 MYH14Q7Z406 1995 aaKnown RBP11.16□□□□□ -0.62
SNX29-208ENST00000569801 H7C1D1 291 aa11.16□□□□□ -0.62
SNX29-208ENST00000569801 PTCD1O75127 700 aaKnown RBP11.16□□□□□ -0.62
SNX29-208ENST00000569801 CABP4P57796 275 aa11.16□□□□□ -0.62
SNX29-208ENST00000569801 C1orf141Q5JVX7 400 aa11.16□□□□□ -0.62
SNX29-208ENST00000569801 IFNL1Q8IU54 200 aa11.16□□□□□ -0.62
SNX29-208ENST00000569801 CACNA1SQ13698 1873 aa11.16□□□□□ -0.62
SNX29-208ENST00000569801 SPTBN4Q9H254 2564 aa11.16□□□□□ -0.62
SNX29-208ENST00000569801 TJP1Q07157 1748 aa11.15□□□□□ -0.62
SNX29-208ENST00000569801 SOS1Q07889 1333 aaPredicted RBP11.15□□□□□ -0.62
SNX29-208ENST00000569801 CDHR2Q9BYE9 1310 aa11.15□□□□□ -0.62
SNX29-208ENST00000569801 NPHP1O15259 732 aa11.15□□□□□ -0.62
SNX29-208ENST00000569801 NPM3O75607 178 aaKnown RBP11.15□□□□□ -0.62
SNX29-208ENST00000569801 HMOX1P09601 288 aa11.15□□□□□ -0.62
SNX29-208ENST00000569801 NPR1P16066 1061 aa11.15□□□□□ -0.62
SNX29-208ENST00000569801 ARHGEF6Q15052 776 aa11.15□□□□□ -0.62
SNX29-208ENST00000569801 TBC1D9BQ66K14 1250 aa11.15□□□□□ -0.62
SNX29-208ENST00000569801 PPM1EQ8WY54 764 aa11.15□□□□□ -0.62
SNX29-208ENST00000569801 CHD6Q8TD26 2715 aa11.14□□□□□ -0.63
SNX29-208ENST00000569801 CRHR2Q13324 411 aa11.14□□□□□ -0.63
SNX29-208ENST00000569801 SULF1Q8IWU6 871 aa11.14□□□□□ -0.63
SNX29-208ENST00000569801 MICALL2Q8IY33 904 aa11.14□□□□□ -0.63
SNX29-208ENST00000569801 ANKRD31Q8N7Z5 1873 aa11.14□□□□□ -0.63
SNX29-208ENST00000569801 COL2A1P02458 1487 aaPredicted RBP11.13□□□□□ -0.63
SNX29-208ENST00000569801 DIAPH1O60610 1272 aaKnown RBP11.13□□□□□ -0.63
SNX29-208ENST00000569801 CCL5P13501 91 aa11.13□□□□□ -0.63
SNX29-208ENST00000569801 TBC1D10BQ4KMP7 808 aaPredicted RBP11.13□□□□□ -0.63
SNX29-208ENST00000569801 CNBD1Q8NA66 436 aa11.13□□□□□ -0.63
SNX29-208ENST00000569801 NFATC2IPQ8NCF5 419 aa11.13□□□□□ -0.63
SNX29-208ENST00000569801 U2AF1L4Q8WU68 220 aaKnown RBP11.13□□□□□ -0.63
SNX29-208ENST00000569801 RNF208Q9H0X6 261 aa11.13□□□□□ -0.63
SNX29-208ENST00000569801 EGFRP00533 1210 aa11.12□□□□□ -0.63
SNX29-208ENST00000569801 CNGB1Q14028 1251 aaPredicted RBP11.12□□□□□ -0.63
SNX29-208ENST00000569801 IGF2BP3O00425 579 aaKnown RBP eCLIP11.11□□□□□ -0.63
SNX29-208ENST00000569801 BMP1P13497 986 aa11.11□□□□□ -0.63
SNX29-208ENST00000569801 ST5P78524 1137 aa11.11□□□□□ -0.63
SNX29-208ENST00000569801 MTHFSDQ2M296 383 aaKnown RBP11.11□□□□□ -0.63
SNX29-208ENST00000569801 KHSRPQ92945 711 aaKnown RBP eCLIP11.11□□□□□ -0.63
SNX29-208ENST00000569801 UIMC1Q96RL1 719 aa11.11□□□□□ -0.63
SNX29-208ENST00000569801 LGR6Q9HBX8 967 aa11.11□□□□□ -0.63
SNX29-208ENST00000569801 ZNRF3Q9ULT6 936 aa11.11□□□□□ -0.63
SNX29-208ENST00000569801 FASNP49327 2511 aaKnown RBP11.1□□□□□ -0.63
SNX29-208ENST00000569801 SNED1Q8TER0 1413 aa11.1□□□□□ -0.63
SNX29-208ENST00000569801 PRR33A8MZF0 331 aa11.1□□□□□ -0.63
SNX29-208ENST00000569801 RNMTO43148 476 aaKnown RBP11.1□□□□□ -0.63
SNX29-208ENST00000569801 RAD17O75943 681 aa11.1□□□□□ -0.63
SNX29-208ENST00000569801 INHBEP58166 350 aa11.1□□□□□ -0.63
SNX29-208ENST00000569801 RBM26Q5T8P6 1007 aaKnown RBP11.1□□□□□ -0.63
SNX29-208ENST00000569801 NUTM1Q86Y26 1132 aa11.1□□□□□ -0.63
SNX29-208ENST00000569801 CNTNAP3BQ96NU0 1288 aa11.1□□□□□ -0.63
SNX29-208ENST00000569801 CNTNAP3Q9BZ76 1288 aa11.1□□□□□ -0.63
SNX29-208ENST00000569801 KCNH6Q9H252 994 aa11.1□□□□□ -0.63
SNX29-208ENST00000569801 SLC52A2Q9HAB3 445 aa11.1□□□□□ -0.63
SNX29-208ENST00000569801 UBR2Q8IWV8 1755 aa11.1□□□□□ -0.63
SNX29-208ENST00000569801 COL15A1P39059 1388 aa11.09□□□□□ -0.63
SNX29-208ENST00000569801 PPIP5K2O43314 1243 aa11.09□□□□□ -0.63
SNX29-208ENST00000569801 SPRYD7Q5W111 196 aa11.09□□□□□ -0.63
SNX29-208ENST00000569801 PAWRQ96IZ0 340 aaKnown RBP11.09□□□□□ -0.63
SNX29-208ENST00000569801 GPR179Q6PRD1 2367 aa11.09□□□□□ -0.63
SNX29-208ENST00000569801 SIPA1L3O60292 1781 aaPredicted RBP11.08□□□□□ -0.64
SNX29-208ENST00000569801 MANSC4A6NHS7 340 aaPredicted RBP11.08□□□□□ -0.64
SNX29-208ENST00000569801 MDM2Q00987 491 aaPredicted RBP11.08□□□□□ -0.64
SNX29-208ENST00000569801 SLC39A6Q13433 755 aa11.08□□□□□ -0.64
SNX29-208ENST00000569801 TCIRG1Q13488 830 aa11.08□□□□□ -0.64
SNX29-208ENST00000569801 AOC3Q16853 763 aa11.08□□□□□ -0.64
SNX29-208ENST00000569801 DNAJC10Q8IXB1 793 aa11.08□□□□□ -0.64
SNX29-208ENST00000569801 GGA3Q9NZ52 723 aa11.08□□□□□ -0.64
SNX29-208ENST00000569801 RALYQ9UKM9 306 aaKnown RBP11.08□□□□□ -0.64
SNX29-208ENST00000569801 U2SURPO15042 1029 aaKnown RBP11.07□□□□□ -0.64
SNX29-208ENST00000569801 SGPL1O95470 568 aa11.07□□□□□ -0.64
SNX29-208ENST00000569801 TTLL12Q14166 644 aaPredicted RBP11.07□□□□□ -0.64
SNX29-208ENST00000569801 TNIP1Q15025 636 aa11.07□□□□□ -0.64
SNX29-208ENST00000569801 TFRCP02786 760 aaKnown RBP11.06□□□□□ -0.64
SNX29-208ENST00000569801 POTEEQ6S8J3 1075 aa11.06□□□□□ -0.64
SNX29-208ENST00000569801 CFAP47Q6ZTR5 3102 aa11.06□□□□□ -0.64
SNX29-208ENST00000569801 ASTN2O75129 1339 aaPredicted RBP11.06□□□□□ -0.64
SNX29-208ENST00000569801 FAM205AQ6ZU69 1335 aa11.06□□□□□ -0.64
SNX29-208ENST00000569801 TPRP12270 2363 aaKnown RBP11.05□□□□□ -0.64
SNX29-208ENST00000569801 PRAMEF22A3QJZ6 481 aa11.05□□□□□ -0.64
SNX29-208ENST00000569801 PPP2R1AP30153 589 aa11.05□□□□□ -0.64
SNX29-208ENST00000569801 ALDH1B1P30837 517 aa11.05□□□□□ -0.64
SNX29-208ENST00000569801 GRIN2CQ14957 1233 aa11.05□□□□□ -0.64
SNX29-208ENST00000569801 CC2D2BQ6DHV5 1058 aa11.05□□□□□ -0.64
SNX29-208ENST00000569801 NECAB2Q7Z6G3 386 aa11.05□□□□□ -0.64
SNX29-208ENST00000569801 GAS2L2Q8NHY3 880 aa11.05□□□□□ -0.64
SNX29-208ENST00000569801 RSPH6AQ9H0K4 717 aa11.05□□□□□ -0.64
SNX29-208ENST00000569801 CDH23Q9H251 3354 aa11.04□□□□□ -0.64
SNX29-208ENST00000569801 ARFGEF2Q9Y6D5 1785 aa11.04□□□□□ -0.64
SNX29-208ENST00000569801 MAST4O15021 2626 aa11.04□□□□□ -0.64
SNX29-208ENST00000569801 PI4K2BG5E9Z4 385 aa11.04□□□□□ -0.64
SNX29-208ENST00000569801 GFRA3O60609 400 aa11.04□□□□□ -0.64
SNX29-208ENST00000569801 CYP19A1P11511 503 aaPredicted RBP11.04□□□□□ -0.64
SNX29-208ENST00000569801 PTPN12Q05209 780 aaKnown RBP11.04□□□□□ -0.64
SNX29-208ENST00000569801 PHACTR3Q96KR7 559 aa11.04□□□□□ -0.64
SNX29-208ENST00000569801 CFAP53Q96M91 514 aa11.04□□□□□ -0.64
SNX29-208ENST00000569801 C5orf42Q9H799 3197 aa11.04□□□□□ -0.64
SNX29-208ENST00000569801 FLNBO75369 2602 aaKnown RBP11.03□□□□□ -0.64
SNX29-208ENST00000569801 MED19A0JLT2 244 aaPredicted RBP11.03□□□□□ -0.64
SNX29-208ENST00000569801 KLRG2A4D1S0 409 aaPredicted RBP11.03□□□□□ -0.64
SNX29-208ENST00000569801 GNAT3A8MTJ3 354 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms