RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 LOC102724428A0A0B4J2F2 783 aa7.94□□□□□ -1.14
SMG1-217ENST00000569764 ATRNO75882 1429 aa7.94□□□□□ -1.14
SMG1-217ENST00000569764 VEGFAP15692 232 aaPredicted RBP7.94□□□□□ -1.14
SMG1-217ENST00000569764 SIK1P57059 783 aa7.94□□□□□ -1.14
SMG1-217ENST00000569764 GNAI1P63096 354 aa7.94□□□□□ -1.14
SMG1-217ENST00000569764 RC3H1Q5TC82 1133 aaKnown RBP7.94□□□□□ -1.14
SMG1-217ENST00000569764 MARF1Q9Y4F3 1742 aaKnown RBP7.94□□□□□ -1.14
SMG1-217ENST00000569764 PLEKHG2Q9H7P9 1386 aa7.94□□□□□ -1.14
SMG1-217ENST00000569764 IGHMBP2P38935 993 aaKnown RBP7.94□□□□□ -1.14
SMG1-217ENST00000569764 ICE2Q659A1 982 aa7.94□□□□□ -1.14
SMG1-217ENST00000569764 TRIM35Q9UPQ4 493 aa7.94□□□□□ -1.14
SMG1-217ENST00000569764 COPB2P35606 906 aa7.94□□□□□ -1.14
SMG1-217ENST00000569764 C2CD5Q86YS7 1000 aa7.94□□□□□ -1.14
SMG1-217ENST00000569764 LARGE2Q8N3Y3 721 aa7.94□□□□□ -1.14
SMG1-217ENST00000569764 CHMP3Q9Y3E7 222 aa7.94□□□□□ -1.14
SMG1-217ENST00000569764 PHACTR3Q96KR7 559 aa7.93□□□□□ -1.14
SMG1-217ENST00000569764 DLG5Q8TDM6 1919 aa7.93□□□□□ -1.14
SMG1-217ENST00000569764 AHDC1Q5TGY3 1603 aaPredicted RBP7.93□□□□□ -1.14
SMG1-217ENST00000569764 SMAPO00193 183 aa7.93□□□□□ -1.14
SMG1-217ENST00000569764 RPS6KA4O75676 772 aa7.93□□□□□ -1.14
SMG1-217ENST00000569764 MTA1Q13330 715 aa7.93□□□□□ -1.14
SMG1-217ENST00000569764 L1TD1Q5T7N2 865 aaKnown RBP7.93□□□□□ -1.14
SMG1-217ENST00000569764 TTC30AQ86WT1 665 aa7.93□□□□□ -1.14
SMG1-217ENST00000569764 ZHX3Q9H4I2 956 aa7.93□□□□□ -1.14
SMG1-217ENST00000569764 CGNQ9P2M7 1197 aaKnown RBP7.93□□□□□ -1.14
SMG1-217ENST00000569764 U3KPZ7 1027 aaPredicted RBP7.93□□□□□ -1.14
SMG1-217ENST00000569764 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.92□□□□□ -1.14
SMG1-217ENST00000569764 TNNI2P48788 182 aa7.92□□□□□ -1.14
SMG1-217ENST00000569764 RUNDC1Q96C34 613 aa7.92□□□□□ -1.14
SMG1-217ENST00000569764 RNF181Q9P0P0 153 aa7.92□□□□□ -1.14
SMG1-217ENST00000569764 CHD2O14647 1828 aaKnown RBP7.92□□□□□ -1.14
SMG1-217ENST00000569764 STK11IPQ8N1F8 1099 aa7.92□□□□□ -1.14
SMG1-217ENST00000569764 MPHOSPH8Q99549 860 aa7.92□□□□□ -1.14
SMG1-217ENST00000569764 RSPH9Q9H1X1 276 aaPredicted RBP7.92□□□□□ -1.14
SMG1-217ENST00000569764 NALCNQ8IZF0 1738 aa7.92□□□□□ -1.14
SMG1-217ENST00000569764 SETDB1Q15047 1291 aa7.92□□□□□ -1.14
SMG1-217ENST00000569764 ZC3H12CQ9C0D7 883 aaKnown RBP7.92□□□□□ -1.14
SMG1-217ENST00000569764 E2F5Q15329 346 aa7.92□□□□□ -1.14
SMG1-217ENST00000569764 TSR2Q969E8 191 aaKnown RBP7.92□□□□□ -1.14
SMG1-217ENST00000569764 CXorf56Q9H5V9 222 aa7.92□□□□□ -1.14
SMG1-217ENST00000569764 ABT1Q9ULW3 272 aaKnown RBP7.92□□□□□ -1.14
SMG1-217ENST00000569764 CCDC30Q5VVM6 783 aa7.91□□□□□ -1.14
SMG1-217ENST00000569764 TAOK3Q9H2K8 898 aa7.91□□□□□ -1.14
SMG1-217ENST00000569764 MMP10P09238 476 aa7.91□□□□□ -1.14
SMG1-217ENST00000569764 HMOX1P09601 288 aa7.91□□□□□ -1.14
SMG1-217ENST00000569764 ERCC5P28715 1186 aaPredicted RBP7.91□□□□□ -1.14
SMG1-217ENST00000569764 TOMM20Q15388 145 aa7.91□□□□□ -1.14
SMG1-217ENST00000569764 TAF7Q15545 349 aaPredicted RBP7.91□□□□□ -1.14
SMG1-217ENST00000569764 C4orf46Q504U0 113 aa7.91□□□□□ -1.14
SMG1-217ENST00000569764 HDGFL1Q5TGJ6 251 aa7.91□□□□□ -1.14
SMG1-217ENST00000569764 REM2Q8IYK8 340 aaPredicted RBP7.91□□□□□ -1.14
SMG1-217ENST00000569764 ZSWIM4Q9H7M6 989 aa7.91□□□□□ -1.14
SMG1-217ENST00000569764 NOP58Q9Y2X3 529 aaKnown RBP7.91□□□□□ -1.14
SMG1-217ENST00000569764 C6orf229H3BNL8 230 aa7.91□□□□□ -1.14
SMG1-217ENST00000569764 S100BP04271 92 aaPredicted RBP7.91□□□□□ -1.14
SMG1-217ENST00000569764 TBX4P57082 545 aa7.91□□□□□ -1.14
SMG1-217ENST00000569764 ENOX1Q8TC92 643 aaKnown RBP7.91□□□□□ -1.14
SMG1-217ENST00000569764 PALLDQ8WX93 1383 aa7.91□□□□□ -1.14
SMG1-217ENST00000569764 CA12O43570 354 aa7.9□□□□□ -1.14
SMG1-217ENST00000569764 SF3A1Q15459 793 aaKnown RBP7.9□□□□□ -1.14
SMG1-217ENST00000569764 CCDC144BQ3MJ40 725 aa7.9□□□□□ -1.14
SMG1-217ENST00000569764 NBPF10Q6P3W6 841 aaKnown RBP7.9□□□□□ -1.14
SMG1-217ENST00000569764 THUMPD2Q9BTF0 503 aaKnown RBP7.9□□□□□ -1.14
SMG1-217ENST00000569764 MAP3K19Q56UN5 1328 aa7.9□□□□□ -1.14
SMG1-217ENST00000569764 PIK3C2AO00443 1686 aa7.9□□□□□ -1.14
SMG1-217ENST00000569764 EAPPQ56P03 285 aaPredicted RBP7.9□□□□□ -1.14
SMG1-217ENST00000569764 FAM43AQ8N2R8 423 aa7.9□□□□□ -1.14
SMG1-217ENST00000569764 DCPSQ96C86 337 aaKnown RBP7.9□□□□□ -1.14
SMG1-217ENST00000569764 DDX27Q96GQ7 796 aaKnown RBP7.9□□□□□ -1.14
SMG1-217ENST00000569764 USP19O94966 1318 aa7.9□□□□□ -1.14
SMG1-217ENST00000569764 CFAP69A5D8W1 941 aa7.9□□□□□ -1.15
SMG1-217ENST00000569764 EIF2S2P20042 333 aaKnown RBP7.9□□□□□ -1.15
SMG1-217ENST00000569764 IL13P35225 146 aa7.9□□□□□ -1.15
SMG1-217ENST00000569764 CCDC70Q6NSX1 233 aa7.9□□□□□ -1.15
SMG1-217ENST00000569764 NAP1L4Q99733 375 aaKnown RBP7.9□□□□□ -1.15
SMG1-217ENST00000569764 RLBP1P12271 317 aa7.89□□□□□ -1.15
SMG1-217ENST00000569764 TMPOP42166 694 aaKnown RBP7.89□□□□□ -1.15
SMG1-217ENST00000569764 PPP4R3BQ5MIZ7 849 aa7.89□□□□□ -1.15
SMG1-217ENST00000569764 DZIP3Q86Y13 1208 aaKnown RBP7.89□□□□□ -1.15
SMG1-217ENST00000569764 C2orf69Q8N8R5 385 aa7.89□□□□□ -1.15
SMG1-217ENST00000569764 RSPH1Q8WYR4 309 aa7.89□□□□□ -1.15
SMG1-217ENST00000569764 DMGDHQ9UI17 866 aaKnown RBP7.89□□□□□ -1.15
SMG1-217ENST00000569764 ERBB4Q15303 1308 aa7.89□□□□□ -1.15
SMG1-217ENST00000569764 NAT2P11245 290 aa7.89□□□□□ -1.15
SMG1-217ENST00000569764 MECOMQ03112 1051 aa7.89□□□□□ -1.15
SMG1-217ENST00000569764 ATF7IPQ6VMQ6 1270 aa7.89□□□□□ -1.15
SMG1-217ENST00000569764 ANKRD23Q86SG2 305 aa7.89□□□□□ -1.15
SMG1-217ENST00000569764 GPIHBP1Q8IV16 184 aa7.89□□□□□ -1.15
SMG1-217ENST00000569764 SULF1Q8IWU6 871 aa7.89□□□□□ -1.15
SMG1-217ENST00000569764 RMI1Q9H9A7 625 aa7.89□□□□□ -1.15
SMG1-217ENST00000569764 BABAM1Q9NWV8 329 aa7.89□□□□□ -1.15
SMG1-217ENST00000569764 LMBRD2Q68DH5 695 aaPredicted RBP7.89□□□□□ -1.15
SMG1-217ENST00000569764 FEZ2Q9UHY8 353 aaPredicted RBP7.89□□□□□ -1.15
SMG1-217ENST00000569764 ROBO1Q9Y6N7 1651 aa7.89□□□□□ -1.15
SMG1-217ENST00000569764 FSTL1Q12841 308 aa7.89□□□□□ -1.15
SMG1-217ENST00000569764 SUDS3Q9H7L9 328 aaPredicted RBP7.89□□□□□ -1.15
SMG1-217ENST00000569764 C9orf78Q9NZ63 289 aaPredicted RBP7.89□□□□□ -1.15
SMG1-217ENST00000569764 USP31Q70CQ4 1352 aa7.88□□□□□ -1.15
SMG1-217ENST00000569764 SATB1Q01826 763 aa7.88□□□□□ -1.15
SMG1-217ENST00000569764 ERFEQ4G0M1 354 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms