RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 ATP2B3Q16720 1220 aa13.29□□□□□ -0.28
PDXDC1-216ENST00000569715 NYXQ9GZU5 481 aa13.29□□□□□ -0.28
PDXDC1-216ENST00000569715 SNAP23O00161 211 aa13.28□□□□□ -0.28
PDXDC1-216ENST00000569715 HAUS7Q99871 368 aa13.28□□□□□ -0.28
PDXDC1-216ENST00000569715 ANO2Q9NQ90 1003 aa13.28□□□□□ -0.28
PDXDC1-216ENST00000569715 AKAP2Q9Y2D5 859 aa13.28□□□□□ -0.28
PDXDC1-216ENST00000569715 ARAP2Q8WZ64 1704 aa13.28□□□□□ -0.28
PDXDC1-216ENST00000569715 CARMIL3Q8ND23 1372 aa13.28□□□□□ -0.28
PDXDC1-216ENST00000569715 SGSM2O43147 1006 aa13.28□□□□□ -0.28
PDXDC1-216ENST00000569715 CHGBP05060 677 aa13.28□□□□□ -0.28
PDXDC1-216ENST00000569715 HSP90B1P14625 803 aaKnown RBP13.28□□□□□ -0.28
PDXDC1-216ENST00000569715 SLC10A5Q5PT55 438 aa13.28□□□□□ -0.28
PDXDC1-216ENST00000569715 ERICH6Q7L0X2 663 aa13.28□□□□□ -0.28
PDXDC1-216ENST00000569715 FSD1Q9BTV5 496 aa13.28□□□□□ -0.28
PDXDC1-216ENST00000569715 DIAPH3Q9NSV4 1193 aa13.28□□□□□ -0.28
PDXDC1-216ENST00000569715 SF3B3Q15393 1217 aaKnown RBP13.28□□□□□ -0.28
PDXDC1-216ENST00000569715 PDE8BO95263 885 aa13.27□□□□□ -0.28
PDXDC1-216ENST00000569715 DDX46Q7L014 1031 aaKnown RBP13.27□□□□□ -0.28
PDXDC1-216ENST00000569715 FAM227BQ96M60 508 aa13.27□□□□□ -0.28
PDXDC1-216ENST00000569715 MPHOSPH8Q99549 860 aa13.27□□□□□ -0.28
PDXDC1-216ENST00000569715 TAF5LO75529 589 aa13.27□□□□□ -0.29
PDXDC1-216ENST00000569715 TPTE2Q6XPS3 522 aa13.27□□□□□ -0.29
PDXDC1-216ENST00000569715 TBC1D2Q9BYX2 928 aa13.27□□□□□ -0.29
PDXDC1-216ENST00000569715 AKT1S1Q96B36 256 aa13.27□□□□□ -0.29
PDXDC1-216ENST00000569715 RGPD3A6NKT7 1758 aaPredicted RBP13.27□□□□□ -0.29
PDXDC1-216ENST00000569715 RGPD4Q7Z3J3 1758 aa13.27□□□□□ -0.29
PDXDC1-216ENST00000569715 IGHMBP2P38935 993 aaKnown RBP13.26□□□□□ -0.29
PDXDC1-216ENST00000569715 NMIQ13287 307 aaPredicted RBP13.26□□□□□ -0.29
PDXDC1-216ENST00000569715 SCARF1Q14162 830 aa13.26□□□□□ -0.29
PDXDC1-216ENST00000569715 MROH5Q6ZUA9 1318 aa13.26□□□□□ -0.29
PDXDC1-216ENST00000569715 AKAP11Q9UKA4 1901 aa13.26□□□□□ -0.29
PDXDC1-216ENST00000569715 CELF1Q92879 486 aaKnown RBP13.26□□□□□ -0.29
PDXDC1-216ENST00000569715 TFCP2L1Q9NZI6 479 aa13.26□□□□□ -0.29
PDXDC1-216ENST00000569715 A0A0D9SFI3 127 aa13.26□□□□□ -0.29
PDXDC1-216ENST00000569715 GOLIM4O00461 696 aa13.26□□□□□ -0.29
PDXDC1-216ENST00000569715 EIF5BO60841 1220 aaKnown RBP13.26□□□□□ -0.29
PDXDC1-216ENST00000569715 GORABQ5T7V8 394 aa13.26□□□□□ -0.29
PDXDC1-216ENST00000569715 IFIT1P09914 478 aaKnown RBP13.25□□□□□ -0.29
PDXDC1-216ENST00000569715 PI16Q6UXB8 463 aa13.25□□□□□ -0.29
PDXDC1-216ENST00000569715 SNRKQ9NRH2 765 aa13.25□□□□□ -0.29
PDXDC1-216ENST00000569715 PALD1Q9ULE6 856 aa13.25□□□□□ -0.29
PDXDC1-216ENST00000569715 NPHP1O15259 732 aa13.25□□□□□ -0.29
PDXDC1-216ENST00000569715 CD2BP2O95400 341 aaKnown RBP13.25□□□□□ -0.29
PDXDC1-216ENST00000569715 FGFR2P21802 821 aa13.25□□□□□ -0.29
PDXDC1-216ENST00000569715 TTC39AQ5SRH9 613 aa13.25□□□□□ -0.29
PDXDC1-216ENST00000569715 CDC5LQ99459 802 aaKnown RBP13.25□□□□□ -0.29
PDXDC1-216ENST00000569715 ANTXR1Q9H6X2 564 aa13.25□□□□□ -0.29
PDXDC1-216ENST00000569715 CNBD1Q8NA66 436 aa13.25□□□□□ -0.29
PDXDC1-216ENST00000569715 NLRP3Q96P20 1036 aa13.25□□□□□ -0.29
PDXDC1-216ENST00000569715 LSG1Q9H089 658 aaKnown RBP13.25□□□□□ -0.29
PDXDC1-216ENST00000569715 PAG1Q9NWQ8 432 aa13.25□□□□□ -0.29
PDXDC1-216ENST00000569715 CHRNDQ07001 517 aa13.24□□□□□ -0.29
PDXDC1-216ENST00000569715 DDR1Q08345 913 aa13.24□□□□□ -0.29
PDXDC1-216ENST00000569715 PUM3Q15397 648 aaKnown RBP13.24□□□□□ -0.29
PDXDC1-216ENST00000569715 SLFNL1Q499Z3 407 aa13.24□□□□□ -0.29
PDXDC1-216ENST00000569715 PRR5LQ6MZQ0 368 aa13.24□□□□□ -0.29
PDXDC1-216ENST00000569715 COL23A1Q86Y22 540 aaPredicted RBP13.24□□□□□ -0.29
PDXDC1-216ENST00000569715 CCDC158Q5M9N0 1113 aa13.24□□□□□ -0.29
PDXDC1-216ENST00000569715 SLC51AQ86UW1 340 aa13.24□□□□□ -0.29
PDXDC1-216ENST00000569715 ANKRD18AQ8IVF6 992 aa13.24□□□□□ -0.29
PDXDC1-216ENST00000569715 MYO5AQ9Y4I1 1855 aaKnown RBP13.24□□□□□ -0.29
PDXDC1-216ENST00000569715 WTIPA6NIX2 430 aaPredicted RBP13.24□□□□□ -0.29
PDXDC1-216ENST00000569715 TM4SF1P30408 202 aa13.24□□□□□ -0.29
PDXDC1-216ENST00000569715 DAXXQ9UER7 740 aaPredicted RBP13.24□□□□□ -0.29
PDXDC1-216ENST00000569715 RAD50Q92878 1312 aa13.23□□□□□ -0.29
PDXDC1-216ENST00000569715 PHKA1P46020 1223 aa13.23□□□□□ -0.29
PDXDC1-216ENST00000569715 PTH1RQ03431 593 aa13.23□□□□□ -0.29
PDXDC1-216ENST00000569715 FKBP4Q02790 459 aaKnown RBP eCLIP13.23□□□□□ -0.29
PDXDC1-216ENST00000569715 BECN1Q14457 450 aa13.23□□□□□ -0.29
PDXDC1-216ENST00000569715 KBTBD3Q8NAB2 608 aa13.23□□□□□ -0.29
PDXDC1-216ENST00000569715 MCAMP43121 646 aa13.23□□□□□ -0.29
PDXDC1-216ENST00000569715 ZNF589Q86UQ0 364 aaPredicted RBP13.23□□□□□ -0.29
PDXDC1-216ENST00000569715 LPIN2Q92539 896 aa13.23□□□□□ -0.29
PDXDC1-216ENST00000569715 SERPINB2P05120 415 aa13.22□□□□□ -0.29
PDXDC1-216ENST00000569715 EN1Q05925 392 aaPredicted RBP13.22□□□□□ -0.29
PDXDC1-216ENST00000569715 EZH2Q15910 746 aaKnown RBP13.22□□□□□ -0.29
PDXDC1-216ENST00000569715 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.22□□□□□ -0.29
PDXDC1-216ENST00000569715 RUFY2Q8WXA3 655 aa13.22□□□□□ -0.29
PDXDC1-216ENST00000569715 MED23Q9ULK4 1368 aa13.22□□□□□ -0.29
PDXDC1-216ENST00000569715 ZAP70P43403 619 aa13.22□□□□□ -0.29
PDXDC1-216ENST00000569715 CCDC102BQ68D86 513 aa13.22□□□□□ -0.29
PDXDC1-216ENST00000569715 SEC62Q99442 399 aaKnown RBP13.22□□□□□ -0.29
PDXDC1-216ENST00000569715 ANO8Q9HCE9 1232 aaPredicted RBP13.22□□□□□ -0.29
PDXDC1-216ENST00000569715 HIP1O00291 1037 aa13.22□□□□□ -0.29
PDXDC1-216ENST00000569715 POLRMTO00411 1230 aaKnown RBP13.22□□□□□ -0.29
PDXDC1-216ENST00000569715 BSDC1Q9NW68 430 aaPredicted RBP13.22□□□□□ -0.29
PDXDC1-216ENST00000569715 PNPLA7Q6ZV29 1317 aa13.21□□□□□ -0.29
PDXDC1-216ENST00000569715 MYH7P12883 1935 aa13.21□□□□□ -0.29
PDXDC1-216ENST00000569715 RFX7Q2KHR2 1363 aa13.21□□□□□ -0.29
PDXDC1-216ENST00000569715 SLC5A1P13866 664 aa13.21□□□□□ -0.29
PDXDC1-216ENST00000569715 MINPP1Q9UNW1 487 aa13.21□□□□□ -0.29
PDXDC1-216ENST00000569715 CCDC129Q6ZRS4 1044 aa13.21□□□□□ -0.3
PDXDC1-216ENST00000569715 ANKRD31Q8N7Z5 1873 aa13.2□□□□□ -0.3
PDXDC1-216ENST00000569715 HSPA4P34932 840 aa13.2□□□□□ -0.3
PDXDC1-216ENST00000569715 RPS8P62241 208 aaKnown RBP13.2□□□□□ -0.3
PDXDC1-216ENST00000569715 KIAA1211Q6ZU35 1233 aa13.2□□□□□ -0.3
PDXDC1-216ENST00000569715 CAMKK2Q96RR4 588 aa13.2□□□□□ -0.3
PDXDC1-216ENST00000569715 CCDC171Q6TFL3 1326 aa13.2□□□□□ -0.3
PDXDC1-216ENST00000569715 RABEP1Q15276 862 aa13.2□□□□□ -0.3
PDXDC1-216ENST00000569715 SPRYD3Q8NCJ5 442 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms